Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-165P-201ENST00000517170 99 ntBASIC1.58□□□□□ -2.16
VPS4BO75351 AP003716.2-201ENST00000528260 108 ntBASIC1.58□□□□□ -2.16
VPS4BO75351 AL020996.3-201ENST00000606617 222 ntBASIC1.58□□□□□ -2.16
VPS4BO75351 RNA5SP48-201ENST00000363969 126 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 MIRLET7F2-201ENST00000385277 83 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 RNU6-1319P-201ENST00000390855 104 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 RNU6-747P-201ENST00000390928 104 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 RNU6-241P-201ENST00000391148 104 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS4BO75351 MIR548I2-201ENST00000408348 149 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 RNU6-177P-201ENST00000411257 104 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 Y_RNA.712-201ENST00000517011 92 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 AC019176.1-201ENST00000518519 225 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 IGKV1-22-201ENST00000524313 326 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 AL512310.8-201ENST00000550183 120 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 MIR4255-201ENST00000579351 72 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 MIR6734-201ENST00000621166 68 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 MIR4251-201ENST00000635819 61 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
VPS4BO75351 Y_RNA.191-201ENST00000363972 113 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 Y_RNA.430-201ENST00000384081 110 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 RNU6-1168P-201ENST00000390831 104 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 MIR1276-201ENST00000408707 83 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 AC008267.6-201ENST00000441664 139 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 RN7SKP19-201ENST00000516016 252 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 RNA5SP220-201ENST00000516298 104 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 RNU6-1234P-201ENST00000516877 103 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 AC021613.1-201ENST00000623880 111 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 MIR6841-201ENST00000637129 72 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 MIR302B-201ENST00000362188 73 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 MIR342-201ENST00000362212 99 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 RNU6-392P-201ENST00000364926 101 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 Y_RNA.563-201ENST00000384707 108 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 AL133373.1-201ENST00000497098 94 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 RNU6-240P-201ENST00000516098 97 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 RNU6-62P-201ENST00000516526 102 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 AL365222.1-201ENST00000614661 98 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 Z97988.1-201ENST00000637697 135 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 RNU6-235P-201ENST00000362644 107 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 RNU6-690P-201ENST00000365242 106 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 Y_RNA.366-201ENST00000365540 102 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
VPS4BO75351 MIR1302-7-201ENST00000408841 72 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 RNA5SP261-201ENST00000410536 106 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 RNU6-1054P-201ENST00000411293 104 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 RN7SKP179-201ENST00000516126 217 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 MIR548AO-201ENST00000579992 96 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 HSPE1P19-201ENST00000603327 295 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 AL137067.1-201ENST00000615933 120 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 MIR6717-201ENST00000622747 73 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 POLR2J4-204ENST00000418424 324 ntBASIC1.53□□□□□ -2.16
VPS4BO75351 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.53□□□□□ -2.16
VPS4BO75351 RPL39P39-201ENST00000455840 151 ntBASIC1.53□□□□□ -2.16
VPS4BO75351 RNU7-107P-201ENST00000459121 61 ntBASIC1.53□□□□□ -2.16
VPS4BO75351 AC133485.4-201ENST00000561835 220 ntBASIC1.53□□□□□ -2.16
VPS4BO75351 AC138907.4-201ENST00000570107 226 ntBASIC1.53□□□□□ -2.16
VPS4BO75351 MIR4452-201ENST00000583004 71 ntBASIC1.53□□□□□ -2.16
VPS4BO75351 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
VPS4BO75351 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
VPS4BO75351 SNORA7.1-201ENST00000363750 139 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 SNORD58C-201ENST00000365223 64 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 RNU6-1190P-201ENST00000410811 104 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 RNA5SP144-201ENST00000410846 116 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS4BO75351 RNU7-45P-201ENST00000459460 63 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 RNU5E-3P-201ENST00000515913 68 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 RNU6-772P-201ENST00000516042 105 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 RNU6-1333P-201ENST00000516162 93 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 MIR3152-201ENST00000579801 74 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 MIR4305-201ENST00000583252 102 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 AL157834.3-201ENST00000615543 103 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS4BO75351 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS4BO75351 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS4BO75351 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS4BO75351 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 RNA5SP205-201ENST00000364653 136 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 SNORA67.6-201ENST00000391093 99 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 RNU2-51P-201ENST00000410708 197 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 RNU6-893P-201ENST00000458841 100 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 RNU6-781P-201ENST00000516377 101 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 PRELID3BP2-201ENST00000605362 201 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 MIR3914-2-201ENST00000637339 95 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 Y_RNA.261-201ENST00000364631 102 ntBASIC1.5□□□□□ -2.17
VPS4BO75351 SNORA22C-201ENST00000384614 134 ntBASIC1.5□□□□□ -2.17
VPS4BO75351 RNA5SP136-201ENST00000410906 107 ntBASIC1.5□□□□□ -2.17
VPS4BO75351 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS4BO75351 RNU2-35P-201ENST00000516446 142 ntBASIC1.5□□□□□ -2.17
VPS4BO75351 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS4BO75351 AC021443.1-201ENST00000604478 211 ntBASIC1.5□□□□□ -2.17
VPS4BO75351 AL121890.5-201ENST00000620848 304 ntBASIC1.5□□□□□ -2.17
VPS4BO75351 SNORD115-2-201ENST00000362842 82 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 232.2 ms