Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-165P-201ENST00000517170 99 ntBASIC1.58□□□□□ -2.16
VPS4BO75351 AP003716.2-201ENST00000528260 108 ntBASIC1.58□□□□□ -2.16
VPS4BO75351 AL020996.3-201ENST00000606617 222 ntBASIC1.58□□□□□ -2.16
VPS4BO75351 RNA5SP48-201ENST00000363969 126 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 MIRLET7F2-201ENST00000385277 83 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 RNU6-1319P-201ENST00000390855 104 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 RNU6-747P-201ENST00000390928 104 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 RNU6-241P-201ENST00000391148 104 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS4BO75351 MIR548I2-201ENST00000408348 149 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 RNU6-177P-201ENST00000411257 104 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 Y_RNA.712-201ENST00000517011 92 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 AC019176.1-201ENST00000518519 225 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 IGKV1-22-201ENST00000524313 326 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 AL512310.8-201ENST00000550183 120 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 MIR4255-201ENST00000579351 72 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 MIR6734-201ENST00000621166 68 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 MIR4251-201ENST00000635819 61 ntBASIC1.57□□□□□ -2.16
VPS4BO75351 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
VPS4BO75351 Y_RNA.191-201ENST00000363972 113 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 Y_RNA.430-201ENST00000384081 110 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 RNU6-1168P-201ENST00000390831 104 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 MIR1276-201ENST00000408707 83 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 AC008267.6-201ENST00000441664 139 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 RN7SKP19-201ENST00000516016 252 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 RNA5SP220-201ENST00000516298 104 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 RNU6-1234P-201ENST00000516877 103 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 AC021613.1-201ENST00000623880 111 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 MIR6841-201ENST00000637129 72 ntBASIC1.56□□□□□ -2.16
VPS4BO75351 MIR302B-201ENST00000362188 73 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 MIR342-201ENST00000362212 99 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 RNU6-392P-201ENST00000364926 101 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 Y_RNA.563-201ENST00000384707 108 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 AL133373.1-201ENST00000497098 94 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 RNU6-240P-201ENST00000516098 97 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 RNU6-62P-201ENST00000516526 102 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 AL365222.1-201ENST00000614661 98 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 Z97988.1-201ENST00000637697 135 ntBASIC1.55□□□□□ -2.16
VPS4BO75351 RNU6-235P-201ENST00000362644 107 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 RNU6-690P-201ENST00000365242 106 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 Y_RNA.366-201ENST00000365540 102 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
VPS4BO75351 MIR1302-7-201ENST00000408841 72 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 RNA5SP261-201ENST00000410536 106 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 RNU6-1054P-201ENST00000411293 104 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 RN7SKP179-201ENST00000516126 217 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 MIR548AO-201ENST00000579992 96 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 HSPE1P19-201ENST00000603327 295 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 AL137067.1-201ENST00000615933 120 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 MIR6717-201ENST00000622747 73 ntBASIC1.54□□□□□ -2.16
VPS4BO75351 POLR2J4-204ENST00000418424 324 ntBASIC1.53□□□□□ -2.16
VPS4BO75351 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.53□□□□□ -2.16
VPS4BO75351 RPL39P39-201ENST00000455840 151 ntBASIC1.53□□□□□ -2.16
VPS4BO75351 RNU7-107P-201ENST00000459121 61 ntBASIC1.53□□□□□ -2.16
VPS4BO75351 AC133485.4-201ENST00000561835 220 ntBASIC1.53□□□□□ -2.16
VPS4BO75351 AC138907.4-201ENST00000570107 226 ntBASIC1.53□□□□□ -2.16
VPS4BO75351 MIR4452-201ENST00000583004 71 ntBASIC1.53□□□□□ -2.16
VPS4BO75351 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
VPS4BO75351 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
VPS4BO75351 SNORA7.1-201ENST00000363750 139 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 SNORD58C-201ENST00000365223 64 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 RNU6-1190P-201ENST00000410811 104 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 RNA5SP144-201ENST00000410846 116 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS4BO75351 RNU7-45P-201ENST00000459460 63 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 RNU5E-3P-201ENST00000515913 68 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 RNU6-772P-201ENST00000516042 105 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 RNU6-1333P-201ENST00000516162 93 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 MIR3152-201ENST00000579801 74 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 MIR4305-201ENST00000583252 102 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 AL157834.3-201ENST00000615543 103 ntBASIC1.52□□□□□ -2.17
VPS4BO75351 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS4BO75351 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS4BO75351 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS4BO75351 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS4BO75351 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 RNA5SP205-201ENST00000364653 136 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 SNORA67.6-201ENST00000391093 99 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 RNU2-51P-201ENST00000410708 197 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 RNU6-893P-201ENST00000458841 100 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 RNU6-781P-201ENST00000516377 101 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 PRELID3BP2-201ENST00000605362 201 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 MIR3914-2-201ENST00000637339 95 ntBASIC1.51□□□□□ -2.17
VPS4BO75351 Y_RNA.261-201ENST00000364631 102 ntBASIC1.5□□□□□ -2.17
VPS4BO75351 SNORA22C-201ENST00000384614 134 ntBASIC1.5□□□□□ -2.17
VPS4BO75351 RNA5SP136-201ENST00000410906 107 ntBASIC1.5□□□□□ -2.17
VPS4BO75351 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS4BO75351 RNU2-35P-201ENST00000516446 142 ntBASIC1.5□□□□□ -2.17
VPS4BO75351 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS4BO75351 AC021443.1-201ENST00000604478 211 ntBASIC1.5□□□□□ -2.17
VPS4BO75351 AL121890.5-201ENST00000620848 304 ntBASIC1.5□□□□□ -2.17
VPS4BO75351 SNORD115-2-201ENST00000362842 82 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms