Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 Y_RNA.565-201ENST00000384719 101 ntBASIC2.2□□□□□ -2.06
TRIM13O60858 MIR516B2-201ENST00000385190 85 ntBASIC2.2□□□□□ -2.06
TRIM13O60858 HMGN2P39-201ENST00000398005 273 ntBASIC2.2□□□□□ -2.06
TRIM13O60858 RPL23AP83-201ENST00000434984 473 ntBASIC2.2□□□□□ -2.06
TRIM13O60858 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM13O60858 AC108938.1-201ENST00000451204 136 ntBASIC2.2□□□□□ -2.06
TRIM13O60858 AC145423.2-201ENST00000610631 239 ntBASIC2.2□□□□□ -2.06
TRIM13O60858 MIR7106-201ENST00000612419 65 ntBASIC2.2□□□□□ -2.06
TRIM13O60858 SNORD3E-202ENST00000627253 216 ntBASIC2.2□□□□□ -2.06
TRIM13O60858 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM13O60858 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM13O60858 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.19□□□□□ -2.06
TRIM13O60858 AL596028.1-201ENST00000326971 197 ntBASIC2.19□□□□□ -2.06
TRIM13O60858 MIR1283-2-201ENST00000408621 87 ntBASIC2.19□□□□□ -2.06
TRIM13O60858 RNU6-613P-201ENST00000410412 108 ntBASIC2.19□□□□□ -2.06
TRIM13O60858 COTL1P1-201ENST00000422309 375 ntBASIC2.19□□□□□ -2.06
TRIM13O60858 RPS29P28-201ENST00000446439 141 ntBASIC2.19□□□□□ -2.06
TRIM13O60858 AC093729.1-201ENST00000513074 128 ntBASIC2.19□□□□□ -2.06
TRIM13O60858 RNA5SP356-201ENST00000515972 94 ntBASIC2.19□□□□□ -2.06
TRIM13O60858 RNA5SP168-201ENST00000516642 112 ntBASIC2.19□□□□□ -2.06
TRIM13O60858 AC121758.2-201ENST00000553271 193 ntBASIC2.19□□□□□ -2.06
TRIM13O60858 SNORD14A-201ENST00000606526 91 ntBASIC2.19□□□□□ -2.06
TRIM13O60858 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM13O60858 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM13O60858 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM13O60858 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
TRIM13O60858 RNU6-1019P-201ENST00000364424 107 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 RNU6-342P-201ENST00000384521 104 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 Y_RNA.567-201ENST00000384736 106 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 MIR597-201ENST00000384968 97 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 MIR452-201ENST00000385020 85 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 MIR519C-201ENST00000385053 87 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 AL034345.1-201ENST00000407768 123 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 MIR548G-201ENST00000408442 89 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 RPL31P63-201ENST00000422565 375 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 AC090255.1-201ENST00000495779 349 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 RNU7-35P-201ENST00000517174 62 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 AC243994.1-201ENST00000618627 109 ntBASIC2.18□□□□□ -2.06
TRIM13O60858 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM13O60858 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM13O60858 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM13O60858 SNORA67.4-201ENST00000384688 142 ntBASIC2.17□□□□□ -2.06
TRIM13O60858 MIR483-201ENST00000385070 76 ntBASIC2.17□□□□□ -2.06
TRIM13O60858 MIR136-201ENST00000385207 82 ntBASIC2.17□□□□□ -2.06
TRIM13O60858 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRIM13O60858 SNORD28B-201ENST00000390993 75 ntBASIC2.17□□□□□ -2.06
TRIM13O60858 HMGN2P3-201ENST00000433603 273 ntBASIC2.17□□□□□ -2.06
TRIM13O60858 HMGN2P5-201ENST00000436882 273 ntBASIC2.17□□□□□ -2.06
TRIM13O60858 RNU7-12P-201ENST00000516030 62 ntBASIC2.17□□□□□ -2.06
TRIM13O60858 AC140658.3-201ENST00000567603 271 ntBASIC2.17□□□□□ -2.06
TRIM13O60858 AC006386.2-201ENST00000624491 75 ntBASIC2.17□□□□□ -2.06
TRIM13O60858 AC012005.1-201ENST00000624575 75 ntBASIC2.17□□□□□ -2.06
TRIM13O60858 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
TRIM13O60858 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM13O60858 SNORA80A-201ENST00000363922 136 ntBASIC2.16□□□□□ -2.06
TRIM13O60858 SNORA6-201ENST00000384033 151 ntBASIC2.16□□□□□ -2.06
TRIM13O60858 SNORA48.3-201ENST00000391081 134 ntBASIC2.16□□□□□ -2.06
TRIM13O60858 HMGN1P33-201ENST00000432945 451 ntBASIC2.16□□□□□ -2.06
TRIM13O60858 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.16□□□□□ -2.06
TRIM13O60858 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM13O60858 AL513043.2-201ENST00000573941 143 ntBASIC2.16□□□□□ -2.06
TRIM13O60858 MIR5094-201ENST00000578766 85 ntBASIC2.16□□□□□ -2.06
TRIM13O60858 MIR5002-201ENST00000584713 97 ntBASIC2.16□□□□□ -2.06
TRIM13O60858 AC020891.4-201ENST00000605745 93 ntBASIC2.16□□□□□ -2.06
TRIM13O60858 RNU6-315P-201ENST00000362666 107 ntBASIC2.15□□□□□ -2.07
TRIM13O60858 Y_RNA.173-201ENST00000363776 113 ntBASIC2.15□□□□□ -2.07
TRIM13O60858 Y_RNA.448-201ENST00000384185 108 ntBASIC2.15□□□□□ -2.07
TRIM13O60858 MIR221-201ENST00000385135 110 ntBASIC2.15□□□□□ -2.07
TRIM13O60858 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TRIM13O60858 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TRIM13O60858 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM13O60858 AC245047.7-201ENST00000440265 293 ntBASIC2.15□□□□□ -2.07
TRIM13O60858 RNU1-98P-201ENST00000458992 160 ntBASIC2.15□□□□□ -2.07
TRIM13O60858 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM13O60858 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.15□□□□□ -2.07
TRIM13O60858 MIR548AR-201ENST00000582191 57 ntBASIC2.15□□□□□ -2.07
TRIM13O60858 RNU6-90P-201ENST00000606352 106 ntBASIC2.15□□□□□ -2.07
TRIM13O60858 MIR6840-201ENST00000611937 71 ntBASIC2.15□□□□□ -2.07
TRIM13O60858 RNU6-865P-201ENST00000364772 107 ntBASIC2.14□□□□□ -2.07
TRIM13O60858 RNU6-950P-201ENST00000384651 107 ntBASIC2.14□□□□□ -2.07
TRIM13O60858 SNORA48.1-201ENST00000390879 135 ntBASIC2.14□□□□□ -2.07
TRIM13O60858 SNORD123-201ENST00000459473 70 ntBASIC2.14□□□□□ -2.07
TRIM13O60858 RNA5SP200-201ENST00000516360 103 ntBASIC2.14□□□□□ -2.07
TRIM13O60858 SNORD67.1-201ENST00000516618 108 ntBASIC2.14□□□□□ -2.07
TRIM13O60858 MIR4529-201ENST00000578110 78 ntBASIC2.14□□□□□ -2.07
TRIM13O60858 SNORD115-37-201ENST00000363768 82 ntBASIC2.13□□□□□ -2.07
TRIM13O60858 SNORA3A-201ENST00000364113 130 ntBASIC2.13□□□□□ -2.07
TRIM13O60858 Y_RNA.537-201ENST00000384626 109 ntBASIC2.13□□□□□ -2.07
TRIM13O60858 RNU6-1031P-201ENST00000384773 107 ntBASIC2.13□□□□□ -2.07
TRIM13O60858 RNU6-1321P-201ENST00000390905 107 ntBASIC2.13□□□□□ -2.07
TRIM13O60858 AC025033.1-201ENST00000463883 194 ntBASIC2.13□□□□□ -2.07
TRIM13O60858 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
TRIM13O60858 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
TRIM13O60858 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.13□□□□□ -2.07
TRIM13O60858 EIF4BP1-201ENST00000554881 351 ntBASIC2.13□□□□□ -2.07
TRIM13O60858 MIR8055-201ENST00000610739 97 ntBASIC2.13□□□□□ -2.07
TRIM13O60858 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM13O60858 MIR8065-201ENST00000620577 100 ntBASIC2.13□□□□□ -2.07
TRIM13O60858 MIR6132-201ENST00000622083 109 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 320.7 ms