Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ACTN4O43707 MIR520C-201ENST00000385005 87 ntBASIC3.09□□□□□ -1.91
ACTN4O43707 RNU4-83P-201ENST00000410863 133 ntBASIC3.09□□□□□ -1.91
ACTN4O43707 EEF1A1P41-201ENST00000414667 207 ntBASIC3.09□□□□□ -1.91
ACTN4O43707 AC104389.3-201ENST00000445629 235 ntBASIC3.09□□□□□ -1.91
ACTN4O43707 AC099513.1-201ENST00000490423 301 ntBASIC3.09□□□□□ -1.91
ACTN4O43707 RNA5SP481-201ENST00000516814 122 ntBASIC3.09□□□□□ -1.91
ACTN4O43707 RNU6-56P-201ENST00000516986 93 ntBASIC3.09□□□□□ -1.91
ACTN4O43707 MIR4325-201ENST00000583049 90 ntBASIC3.09□□□□□ -1.91
ACTN4O43707 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.09□□□□□ -1.91
ACTN4O43707 MIR424-201ENST00000362227 98 ntBASIC3.08□□□□□ -1.92
ACTN4O43707 RNU6-161P-201ENST00000363051 106 ntBASIC3.08□□□□□ -1.92
ACTN4O43707 SNORA25.9-201ENST00000365087 128 ntBASIC3.08□□□□□ -1.92
ACTN4O43707 MIR634-201ENST00000385208 97 ntBASIC3.08□□□□□ -1.92
ACTN4O43707 HMGN2P3-201ENST00000433603 273 ntBASIC3.08□□□□□ -1.92
ACTN4O43707 HMGN2P5-201ENST00000436882 273 ntBASIC3.08□□□□□ -1.92
ACTN4O43707 RPS27P21-201ENST00000486977 252 ntBASIC3.08□□□□□ -1.92
ACTN4O43707 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.08□□□□□ -1.92
ACTN4O43707 AL162274.2-201ENST00000614406 332 ntBASIC3.08□□□□□ -1.92
ACTN4O43707 MAPK10-266ENST00000641066 6555 ntBASIC3.08□□□□□ -1.92
ACTN4O43707 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ACTN4O43707 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ACTN4O43707 SNORA44-201ENST00000384584 132 ntBASIC3.07□□□□□ -1.92
ACTN4O43707 MIR627-201ENST00000384979 97 ntBASIC3.07□□□□□ -1.92
ACTN4O43707 Y_RNA.648-201ENST00000459455 110 ntBASIC3.07□□□□□ -1.92
ACTN4O43707 Y_RNA.660-201ENST00000516002 120 ntBASIC3.07□□□□□ -1.92
ACTN4O43707 MIR4500-201ENST00000579472 76 ntBASIC3.07□□□□□ -1.92
ACTN4O43707 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ACTN4O43707 AC008163.1-202ENST00000636004 2889 ntBASIC3.07□□□□□ -1.92
ACTN4O43707 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
ACTN4O43707 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ACTN4O43707 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ACTN4O43707 Y_RNA.340-201ENST00000365330 92 ntBASIC3.06□□□□□ -1.92
ACTN4O43707 MIR1283-2-201ENST00000408621 87 ntBASIC3.06□□□□□ -1.92
ACTN4O43707 SNRPGP12-201ENST00000449481 213 ntBASIC3.06□□□□□ -1.92
ACTN4O43707 AC011753.1-201ENST00000451001 220 ntBASIC3.06□□□□□ -1.92
ACTN4O43707 S100A11P2-201ENST00000467589 312 ntBASIC3.06□□□□□ -1.92
ACTN4O43707 FGF7P7-201ENST00000514120 227 ntBASIC3.06□□□□□ -1.92
ACTN4O43707 RNU6-1108P-201ENST00000516308 104 ntBASIC3.06□□□□□ -1.92
ACTN4O43707 AC079600.2-201ENST00000550076 130 ntBASIC3.06□□□□□ -1.92
ACTN4O43707 SUB1P4-201ENST00000566062 339 ntBASIC3.06□□□□□ -1.92
ACTN4O43707 MIR3200-201ENST00000580767 85 ntBASIC3.06□□□□□ -1.92
ACTN4O43707 AL161431.1-201ENST00000618966 4205 ntBASIC3.06□□□□□ -1.92
ACTN4O43707 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ACTN4O43707 SNORA38-201ENST00000363946 132 ntBASIC3.05□□□□□ -1.92
ACTN4O43707 RNU1-112P-201ENST00000364401 164 ntBASIC3.05□□□□□ -1.92
ACTN4O43707 SNORA48.1-201ENST00000390879 135 ntBASIC3.05□□□□□ -1.92
ACTN4O43707 RNA5SP465-201ENST00000391195 109 ntBASIC3.05□□□□□ -1.92
ACTN4O43707 AC019129.1-201ENST00000403786 261 ntBASIC3.05□□□□□ -1.92
ACTN4O43707 RNU6-850P-201ENST00000516934 103 ntBASIC3.05□□□□□ -1.92
ACTN4O43707 MIR3935-201ENST00000583472 104 ntBASIC3.05□□□□□ -1.92
ACTN4O43707 AL662814.1-201ENST00000617364 121 ntBASIC3.05□□□□□ -1.92
ACTN4O43707 MIR4251-201ENST00000635819 61 ntBASIC3.05□□□□□ -1.92
ACTN4O43707 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ACTN4O43707 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ACTN4O43707 RNU6-112P-201ENST00000363599 104 ntBASIC3.04□□□□□ -1.92
ACTN4O43707 RNU6-811P-201ENST00000384069 107 ntBASIC3.04□□□□□ -1.92
ACTN4O43707 RNU1-148P-201ENST00000384472 162 ntBASIC3.04□□□□□ -1.92
ACTN4O43707 RNU6-296P-201ENST00000384608 107 ntBASIC3.04□□□□□ -1.92
ACTN4O43707 AL138827.1-201ENST00000402666 306 ntBASIC3.04□□□□□ -1.92
ACTN4O43707 RNA5SP137-201ENST00000516833 135 ntBASIC3.04□□□□□ -1.92
ACTN4O43707 RNU6-1015P-201ENST00000517121 99 ntBASIC3.04□□□□□ -1.92
ACTN4O43707 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
ACTN4O43707 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ACTN4O43707 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ACTN4O43707 RNU6-949P-201ENST00000384040 107 ntBASIC3.03□□□□□ -1.92
ACTN4O43707 SNORA72.6-201ENST00000384520 129 ntBASIC3.03□□□□□ -1.92
ACTN4O43707 AC023790.1-201ENST00000482174 347 ntBASIC3.03□□□□□ -1.92
ACTN4O43707 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.03□□□□□ -1.92
ACTN4O43707 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
ACTN4O43707 RNU6-807P-201ENST00000516805 107 ntBASIC3.02□□□□□ -1.93
ACTN4O43707 RNU6-448P-201ENST00000517052 107 ntBASIC3.02□□□□□ -1.93
ACTN4O43707 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.02□□□□□ -1.93
ACTN4O43707 AC131280.1-202ENST00000624067 4211 ntBASIC3.02□□□□□ -1.93
ACTN4O43707 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.01□□□□□ -1.93
ACTN4O43707 RNU6-571P-201ENST00000384128 107 ntBASIC3.01□□□□□ -1.93
ACTN4O43707 RNA5SP21-201ENST00000410917 96 ntBASIC3.01□□□□□ -1.93
ACTN4O43707 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.01□□□□□ -1.93
ACTN4O43707 AC138749.4-201ENST00000563970 127 ntBASIC3.01□□□□□ -1.93
ACTN4O43707 MIR4484-201ENST00000582855 83 ntBASIC3.01□□□□□ -1.93
ACTN4O43707 MIR4536-1-201ENST00000583537 88 ntBASIC3.01□□□□□ -1.93
ACTN4O43707 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ACTN4O43707 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ACTN4O43707 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
ACTN4O43707 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3□□□□□ -1.93
ACTN4O43707 MIR128-1-201ENST00000384921 82 ntBASIC3□□□□□ -1.93
ACTN4O43707 SNORA48.2-201ENST00000390926 124 ntBASIC3□□□□□ -1.93
ACTN4O43707 RNA5SP492-201ENST00000411330 114 ntBASIC3□□□□□ -1.93
ACTN4O43707 AC092427.1-202ENST00000430569 476 ntBASIC3□□□□□ -1.93
ACTN4O43707 AC105272.1-201ENST00000438604 198 ntBASIC3□□□□□ -1.93
ACTN4O43707 RNU6-70P-201ENST00000516438 60 ntBASIC3□□□□□ -1.93
ACTN4O43707 Y_RNA.681-201ENST00000516445 113 ntBASIC3□□□□□ -1.93
ACTN4O43707 MIR4635-201ENST00000583759 79 ntBASIC3□□□□□ -1.93
ACTN4O43707 U6.109-201ENST00000636749 87 ntBASIC3□□□□□ -1.93
ACTN4O43707 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ACTN4O43707 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ACTN4O43707 AL161722.3-201ENST00000605789 2983 ntBASIC2.99□□□□□ -1.93
ACTN4O43707 MIR518A2-201ENST00000384966 87 ntBASIC2.99□□□□□ -1.93
ACTN4O43707 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
ACTN4O43707 RNA5SP292-201ENST00000390974 118 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms