Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHOXO15266 MIR30A-201ENST00000385092 71 ntBASIC1.99□□□□□ -2.09
SHOXO15266 snoU13.26-201ENST00000459452 105 ntBASIC1.99□□□□□ -2.09
SHOXO15266 RNU6-250P-201ENST00000516958 103 ntBASIC1.99□□□□□ -2.09
SHOXO15266 MIR4319-201ENST00000577285 85 ntBASIC1.99□□□□□ -2.09
SHOXO15266 AL096840.1-201ENST00000603287 93 ntBASIC1.99□□□□□ -2.09
SHOXO15266 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.99□□□□□ -2.09
SHOXO15266 MIR8065-201ENST00000620577 100 ntBASIC1.99□□□□□ -2.09
SHOXO15266 MIR8063-201ENST00000621930 81 ntBASIC1.99□□□□□ -2.09
SHOXO15266 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.99□□□□□ -2.09
SHOXO15266 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SHOXO15266 RNU6-1298P-201ENST00000362456 101 ntBASIC1.98□□□□□ -2.09
SHOXO15266 SNORA32-201ENST00000384072 121 ntBASIC1.98□□□□□ -2.09
SHOXO15266 RNU6-602P-201ENST00000411155 105 ntBASIC1.98□□□□□ -2.09
SHOXO15266 RNU6-970P-201ENST00000516312 107 ntBASIC1.98□□□□□ -2.09
SHOXO15266 SNORA40.13-201ENST00000516379 120 ntBASIC1.98□□□□□ -2.09
SHOXO15266 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
SHOXO15266 MIR4694-201ENST00000578534 80 ntBASIC1.98□□□□□ -2.09
SHOXO15266 MIR4769-201ENST00000584126 77 ntBASIC1.98□□□□□ -2.09
SHOXO15266 AC012493.3-201ENST00000604494 112 ntBASIC1.98□□□□□ -2.09
SHOXO15266 AL627230.6-201ENST00000611129 280 ntBASIC1.98□□□□□ -2.09
SHOXO15266 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SHOXO15266 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SHOXO15266 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SHOXO15266 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SHOXO15266 U8.2-201ENST00000363156 134 ntBASIC1.97□□□□□ -2.09
SHOXO15266 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
SHOXO15266 AC009474.2-201ENST00000451383 136 ntBASIC1.97□□□□□ -2.09
SHOXO15266 DEFB131E-201ENST00000532329 154 ntBASIC1.97□□□□□ -2.09
SHOXO15266 Y_RNA.773-201ENST00000607168 90 ntBASIC1.97□□□□□ -2.09
SHOXO15266 AC067747.1-201ENST00000608026 250 ntBASIC1.97□□□□□ -2.09
SHOXO15266 AP001318.4-201ENST00000616637 121 ntBASIC1.97□□□□□ -2.09
SHOXO15266 MIR2052-201ENST00000636055 55 ntBASIC1.97□□□□□ -2.09
SHOXO15266 MIR1255B1-201ENST00000636325 63 ntBASIC1.97□□□□□ -2.09
SHOXO15266 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SHOXO15266 RNY3P2-201ENST00000362918 102 ntBASIC1.96□□□□□ -2.1
SHOXO15266 RNU6-616P-201ENST00000384353 107 ntBASIC1.96□□□□□ -2.1
SHOXO15266 SNORA18-201ENST00000384416 132 ntBASIC1.96□□□□□ -2.1
SHOXO15266 RNU6-1065P-201ENST00000384513 106 ntBASIC1.96□□□□□ -2.1
SHOXO15266 RNU6-904P-201ENST00000516206 101 ntBASIC1.96□□□□□ -2.1
SHOXO15266 RNA5SP320-201ENST00000516263 124 ntBASIC1.96□□□□□ -2.1
SHOXO15266 RNA5SP24-201ENST00000516478 95 ntBASIC1.96□□□□□ -2.1
SHOXO15266 MIR3198-2-201ENST00000577868 80 ntBASIC1.96□□□□□ -2.1
SHOXO15266 AC103810.8-201ENST00000607347 118 ntBASIC1.96□□□□□ -2.1
SHOXO15266 AL590808.1-201ENST00000618696 141 ntBASIC1.96□□□□□ -2.1
SHOXO15266 AC062016.1-201ENST00000355719 319 ntBASIC1.95□□□□□ -2.1
SHOXO15266 MIR590-201ENST00000385008 97 ntBASIC1.95□□□□□ -2.1
SHOXO15266 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SHOXO15266 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.95□□□□□ -2.1
SHOXO15266 Y_RNA.676-201ENST00000516393 96 ntBASIC1.95□□□□□ -2.1
SHOXO15266 RNU6-158P-201ENST00000517104 100 ntBASIC1.95□□□□□ -2.1
SHOXO15266 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
SHOXO15266 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SHOXO15266 AL359511.1-201ENST00000402970 211 ntBASIC1.94□□□□□ -2.1
SHOXO15266 RNA5SP237-201ENST00000410414 113 ntBASIC1.94□□□□□ -2.1
SHOXO15266 RNU6-1086P-201ENST00000410930 100 ntBASIC1.94□□□□□ -2.1
SHOXO15266 RPL30P7-201ENST00000479312 323 ntBASIC1.94□□□□□ -2.1
SHOXO15266 AC079140.2-201ENST00000506193 142 ntBASIC1.94□□□□□ -2.1
SHOXO15266 RNU6-1018P-201ENST00000516577 106 ntBASIC1.94□□□□□ -2.1
SHOXO15266 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
SHOXO15266 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
SHOXO15266 RNU7-35P-201ENST00000517174 62 ntBASIC1.94□□□□□ -2.1
SHOXO15266 AL033523.1-201ENST00000605153 153 ntBASIC1.94□□□□□ -2.1
SHOXO15266 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SHOXO15266 RNU6-1255P-201ENST00000363434 112 ntBASIC1.93□□□□□ -2.1
SHOXO15266 Y_RNA.348-201ENST00000365403 103 ntBASIC1.93□□□□□ -2.1
SHOXO15266 Y_RNA.360-201ENST00000365512 102 ntBASIC1.93□□□□□ -2.1
SHOXO15266 RNU6-342P-201ENST00000384521 104 ntBASIC1.93□□□□□ -2.1
SHOXO15266 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
SHOXO15266 SNORA7.5-201ENST00000410672 110 ntBASIC1.93□□□□□ -2.1
SHOXO15266 RPL31P63-201ENST00000422565 375 ntBASIC1.93□□□□□ -2.1
SHOXO15266 HMGN2P23-201ENST00000456759 269 ntBASIC1.93□□□□□ -2.1
SHOXO15266 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
SHOXO15266 AC006254.2-201ENST00000603259 279 ntBASIC1.93□□□□□ -2.1
SHOXO15266 AL096861.1-201ENST00000610899 123 ntBASIC1.93□□□□□ -2.1
SHOXO15266 MIR6817-201ENST00000615588 66 ntBASIC1.93□□□□□ -2.1
SHOXO15266 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
SHOXO15266 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.92□□□□□ -2.1
SHOXO15266 Y_RNA.93-201ENST00000363066 109 ntBASIC1.92□□□□□ -2.1
SHOXO15266 Y_RNA.107-201ENST00000363190 121 ntBASIC1.92□□□□□ -2.1
SHOXO15266 RNU6-396P-201ENST00000365369 105 ntBASIC1.92□□□□□ -2.1
SHOXO15266 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.92□□□□□ -2.1
SHOXO15266 Y_RNA.601-201ENST00000410500 113 ntBASIC1.92□□□□□ -2.1
SHOXO15266 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
SHOXO15266 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.92□□□□□ -2.1
SHOXO15266 SCARNA23-201ENST00000516060 130 ntBASIC1.92□□□□□ -2.1
SHOXO15266 RNU6-947P-201ENST00000516264 106 ntBASIC1.92□□□□□ -2.1
SHOXO15266 RNA5SP148-201ENST00000516527 94 ntBASIC1.92□□□□□ -2.1
SHOXO15266 MIR1291-201ENST00000627649 87 ntBASIC1.92□□□□□ -2.1
SHOXO15266 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SHOXO15266 RNU6-1099P-201ENST00000363533 107 ntBASIC1.91□□□□□ -2.1
SHOXO15266 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
SHOXO15266 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
SHOXO15266 SNORA19.1-201ENST00000410656 129 ntBASIC1.91□□□□□ -2.1
SHOXO15266 MIR1270-201ENST00000459320 83 ntBASIC1.91□□□□□ -2.1
SHOXO15266 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
SHOXO15266 AC026436.1-201ENST00000510537 270 ntBASIC1.91□□□□□ -2.1
SHOXO15266 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.91□□□□□ -2.1
SHOXO15266 RNU7-2P-201ENST00000516096 62 ntBASIC1.91□□□□□ -2.1
SHOXO15266 MIR2115-201ENST00000516657 100 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms