Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 SNORA48.1-201ENST00000390879 135 ntBASIC3.79□□□□□ -1.8
VGFO15240 AC099513.1-201ENST00000490423 301 ntBASIC3.79□□□□□ -1.8
VGFO15240 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.79□□□□□ -1.8
VGFO15240 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VGFO15240 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.78□□□□□ -1.8
VGFO15240 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VGFO15240 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VGFO15240 RNU6-519P-201ENST00000410590 108 ntBASIC3.78□□□□□ -1.8
VGFO15240 AC008413.1-201ENST00000511864 177 ntBASIC3.78□□□□□ -1.8
VGFO15240 SUB1P4-201ENST00000566062 339 ntBASIC3.78□□□□□ -1.8
VGFO15240 SNORD53-201ENST00000579969 78 ntBASIC3.78□□□□□ -1.8
VGFO15240 SNORD14A-201ENST00000606526 91 ntBASIC3.78□□□□□ -1.8
VGFO15240 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.78□□□□□ -1.8
VGFO15240 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
VGFO15240 SNORA38-201ENST00000363946 132 ntBASIC3.77□□□□□ -1.81
VGFO15240 RN7SL75P-201ENST00000461926 281 ntBASIC3.77□□□□□ -1.81
VGFO15240 RNA5SP24-201ENST00000516478 95 ntBASIC3.77□□□□□ -1.81
VGFO15240 AC020891.4-201ENST00000605745 93 ntBASIC3.77□□□□□ -1.81
VGFO15240 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.76□□□□□ -1.81
VGFO15240 MIR424-201ENST00000362227 98 ntBASIC3.76□□□□□ -1.81
VGFO15240 RNU6-112P-201ENST00000363599 104 ntBASIC3.76□□□□□ -1.81
VGFO15240 Y_RNA.565-201ENST00000384719 101 ntBASIC3.76□□□□□ -1.81
VGFO15240 MIR518A2-201ENST00000384966 87 ntBASIC3.76□□□□□ -1.81
VGFO15240 RPS29P6-201ENST00000438196 145 ntBASIC3.76□□□□□ -1.81
VGFO15240 AC140658.3-201ENST00000567603 271 ntBASIC3.76□□□□□ -1.81
VGFO15240 MIR4764-201ENST00000580680 88 ntBASIC3.76□□□□□ -1.81
VGFO15240 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VGFO15240 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VGFO15240 Z96811.1-201ENST00000445880 108 ntBASIC3.75□□□□□ -1.81
VGFO15240 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.75□□□□□ -1.81
VGFO15240 AC145423.2-201ENST00000610631 239 ntBASIC3.75□□□□□ -1.81
VGFO15240 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VGFO15240 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VGFO15240 SNORD56.5-201ENST00000364281 72 ntBASIC3.74□□□□□ -1.81
VGFO15240 SNORA2B-201ENST00000384583 137 ntBASIC3.74□□□□□ -1.81
VGFO15240 RNU6-296P-201ENST00000384608 107 ntBASIC3.74□□□□□ -1.81
VGFO15240 MIR27B-201ENST00000385129 97 ntBASIC3.74□□□□□ -1.81
VGFO15240 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VGFO15240 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.74□□□□□ -1.81
VGFO15240 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.74□□□□□ -1.81
VGFO15240 SNORA9.3-201ENST00000516383 129 ntBASIC3.74□□□□□ -1.81
VGFO15240 AC133485.1-201ENST00000567176 124 ntBASIC3.74□□□□□ -1.81
VGFO15240 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.74□□□□□ -1.81
VGFO15240 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VGFO15240 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VGFO15240 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VGFO15240 MIR520C-201ENST00000385005 87 ntBASIC3.73□□□□□ -1.81
VGFO15240 RNA5SP237-201ENST00000410414 113 ntBASIC3.73□□□□□ -1.81
VGFO15240 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.73□□□□□ -1.81
VGFO15240 RNY1P13-201ENST00000365030 105 ntBASIC3.72□□□□□ -1.81
VGFO15240 SNORD38B-201ENST00000384690 67 ntBASIC3.72□□□□□ -1.81
VGFO15240 SNORA3.2-201ENST00000408221 125 ntBASIC3.72□□□□□ -1.81
VGFO15240 RNA5SP501-201ENST00000410990 112 ntBASIC3.72□□□□□ -1.81
VGFO15240 AP004217.1-201ENST00000480579 346 ntBASIC3.72□□□□□ -1.81
VGFO15240 RNA5SP320-201ENST00000516263 124 ntBASIC3.72□□□□□ -1.81
VGFO15240 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.72□□□□□ -1.81
VGFO15240 U4.3-201ENST00000621047 82 ntBASIC3.72□□□□□ -1.81
VGFO15240 SNORD38B-202ENST00000625943 69 ntBASIC3.72□□□□□ -1.81
VGFO15240 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
VGFO15240 AC027119.1-201ENST00000440877 241 ntBASIC3.71□□□□□ -1.82
VGFO15240 MIR548AO-201ENST00000579992 96 ntBASIC3.71□□□□□ -1.82
VGFO15240 MIR4635-201ENST00000583759 79 ntBASIC3.71□□□□□ -1.82
VGFO15240 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VGFO15240 AC108206.1-201ENST00000570186 4159 ntBASIC3.71□□□□□ -1.82
VGFO15240 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VGFO15240 ZNF658B-202ENST00000615961 3375 ntBASIC3.7□□□□□ -1.82
VGFO15240 RNA5SP432-201ENST00000362480 116 ntBASIC3.7□□□□□ -1.82
VGFO15240 RNU6-1229P-201ENST00000364295 107 ntBASIC3.7□□□□□ -1.82
VGFO15240 MIR1236-201ENST00000408340 102 ntBASIC3.7□□□□□ -1.82
VGFO15240 RNA5SP492-201ENST00000411330 114 ntBASIC3.69□□□□□ -1.82
VGFO15240 HMGN2P35-201ENST00000412164 270 ntBASIC3.69□□□□□ -1.82
VGFO15240 UBBP3-201ENST00000445497 241 ntBASIC3.69□□□□□ -1.82
VGFO15240 AC011753.1-201ENST00000451001 220 ntBASIC3.69□□□□□ -1.82
VGFO15240 RPS29P11-201ENST00000496507 171 ntBASIC3.69□□□□□ -1.82
VGFO15240 U7.4-201ENST00000614961 63 ntBASIC3.69□□□□□ -1.82
VGFO15240 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VGFO15240 RNU6-315P-201ENST00000362666 107 ntBASIC3.68□□□□□ -1.82
VGFO15240 MIR4251-201ENST00000635819 61 ntBASIC3.68□□□□□ -1.82
VGFO15240 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VGFO15240 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VGFO15240 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VGFO15240 RNA5SP289-201ENST00000362332 137 ntBASIC3.67□□□□□ -1.82
VGFO15240 VTRNA1-1-201ENST00000363120 99 ntBASIC3.67□□□□□ -1.82
VGFO15240 RNU4-32P-201ENST00000363404 141 ntBASIC3.67□□□□□ -1.82
VGFO15240 RNU6-129P-201ENST00000391022 107 ntBASIC3.67□□□□□ -1.82
VGFO15240 RNU7-153P-201ENST00000516455 62 ntBASIC3.67□□□□□ -1.82
VGFO15240 AC141846.1-201ENST00000568348 142 ntBASIC3.67□□□□□ -1.82
VGFO15240 AP000753.3-201ENST00000604083 169 ntBASIC3.67□□□□□ -1.82
VGFO15240 MIR8066-201ENST00000617280 78 ntBASIC3.67□□□□□ -1.82
VGFO15240 AC131280.1-202ENST00000624067 4211 ntBASIC3.66□□□□□ -1.82
VGFO15240 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VGFO15240 HSBP1P2-201ENST00000299671 229 ntBASIC3.66□□□□□ -1.82
VGFO15240 HMGN2P39-201ENST00000398005 273 ntBASIC3.66□□□□□ -1.82
VGFO15240 AC087499.7-201ENST00000441958 109 ntBASIC3.66□□□□□ -1.82
VGFO15240 RNU6-917P-201ENST00000516294 104 ntBASIC3.66□□□□□ -1.82
VGFO15240 MIR3935-201ENST00000583472 104 ntBASIC3.66□□□□□ -1.82
VGFO15240 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
VGFO15240 RNU1-138P-201ENST00000384093 164 ntBASIC3.65□□□□□ -1.83
VGFO15240 AC019129.1-201ENST00000403786 261 ntBASIC3.65□□□□□ -1.83
VGFO15240 SNORA25.13-201ENST00000516395 103 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms