Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RNU7-107P-201ENST00000459121 61 ntBASIC1.17□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU2-35P-201ENST00000516446 142 ntBASIC1.17□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-406P-201ENST00000516470 107 ntBASIC1.17□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-1061P-201ENST00000516530 99 ntBASIC1.17□□□□□ -2.22
IGHV4-28A0A0C4DH34 MIR6516-201ENST00000630554 81 ntBASIC1.17□□□□□ -2.22
IGHV4-28A0A0C4DH34 MIR6841-201ENST00000637129 72 ntBASIC1.17□□□□□ -2.22
IGHV4-28A0A0C4DH34 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
IGHV4-28A0A0C4DH34 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 AL157777.2-201ENST00000258070 137 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 Y_RNA.71-201ENST00000362892 104 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 Y_RNA.171-201ENST00000363760 102 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-654P-201ENST00000364373 107 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 Y_RNA.363-201ENST00000365529 113 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 Y_RNA.430-201ENST00000384081 110 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-80P-201ENST00000384195 107 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 Y_RNA.525-201ENST00000384570 113 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 SNORD38B-201ENST00000384690 67 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-910P-201ENST00000390844 107 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 SNORA75.2-201ENST00000391138 150 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 SNORA75.3-201ENST00000391231 150 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 AL022718.1-201ENST00000412004 84 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU7-123P-201ENST00000515911 60 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-970P-201ENST00000516312 107 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-781P-201ENST00000516377 101 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 MIR2115-201ENST00000516657 100 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNY4P20-201ENST00000516678 93 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 SNORD53B-201ENST00000577887 78 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 SNORD38B-202ENST00000625943 69 ntBASIC1.16□□□□□ -2.22
IGHV4-28A0A0C4DH34 Y_RNA.298-201ENST00000364960 107 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNA5SP363-201ENST00000365072 115 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 Y_RNA.330-201ENST00000365230 109 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORA19-201ENST00000384737 128 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-205P-201ENST00000390858 107 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORA67.5-201ENST00000391036 107 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORA17.3-201ENST00000391159 129 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 MIR1263-201ENST00000408324 86 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNA5SP95-201ENST00000410319 137 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 Y_RNA.617-201ENST00000410920 90 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC108667.1-201ENST00000428618 249 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU1-98P-201ENST00000458992 160 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-772P-201ENST00000516042 105 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU11-2P-201ENST00000516898 142 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-1258P-201ENST00000516911 111 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 BX248123.2-201ENST00000606318 124 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
IGHV4-28A0A0C4DH34 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.14□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNA5SP327-201ENST00000362494 101 ntBASIC1.14□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORD58C-201ENST00000365223 64 ntBASIC1.14□□□□□ -2.23
IGHV4-28A0A0C4DH34 Y_RNA.354-201ENST00000365448 111 ntBASIC1.14□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORD12C-201ENST00000386307 89 ntBASIC1.14□□□□□ -2.23
IGHV4-28A0A0C4DH34 AL512326.2-201ENST00000426359 151 ntBASIC1.14□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC244023.1-201ENST00000426884 112 ntBASIC1.14□□□□□ -2.23
IGHV4-28A0A0C4DH34 AL606753.1-201ENST00000427435 87 ntBASIC1.14□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-893P-201ENST00000458841 100 ntBASIC1.14□□□□□ -2.23
IGHV4-28A0A0C4DH34 MIR4303-201ENST00000581299 66 ntBASIC1.14□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC242498.1-201ENST00000604134 111 ntBASIC1.14□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORD116-14-201ENST00000383894 92 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORD116-17-201ENST00000383929 92 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORD116-15-201ENST00000384445 92 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-1117P-201ENST00000384525 104 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORD116-19-201ENST00000384729 92 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORA67.6-201ENST00000391093 99 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-613P-201ENST00000410412 108 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU7-113P-201ENST00000459273 62 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-1333P-201ENST00000516162 93 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC004812.1-201ENST00000540773 146 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 AP000753.3-201ENST00000604083 169 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 AL365222.1-201ENST00000614661 98 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 SEPT14P17-201ENST00000617978 177 ntBASIC1.13□□□□□ -2.23
IGHV4-28A0A0C4DH34 Y_RNA.127-201ENST00000363386 109 ntBASIC1.12□□□□□ -2.23
IGHV4-28A0A0C4DH34 Y_RNA.261-201ENST00000364631 102 ntBASIC1.12□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORD113-1-201ENST00000365321 69 ntBASIC1.12□□□□□ -2.23
IGHV4-28A0A0C4DH34 Y_RNA.470-201ENST00000384307 117 ntBASIC1.12□□□□□ -2.23
IGHV4-28A0A0C4DH34 MIR222-201ENST00000384992 110 ntBASIC1.12□□□□□ -2.23
IGHV4-28A0A0C4DH34 Y_RNA.630-201ENST00000411370 108 ntBASIC1.12□□□□□ -2.23
IGHV4-28A0A0C4DH34 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.12□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-659P-201ENST00000516454 104 ntBASIC1.12□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORA70.22-201ENST00000517160 124 ntBASIC1.12□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC022523.2-201ENST00000561045 150 ntBASIC1.12□□□□□ -2.23
IGHV4-28A0A0C4DH34 MIR378A-201ENST00000362177 66 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU1-42P-201ENST00000364033 160 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORA80D-201ENST00000384488 135 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 Y_RNA.528-201ENST00000384575 108 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 Y_RNA.531-201ENST00000384589 121 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 MIR517C-201ENST00000385103 95 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 MT-TN-201ENST00000387400 73 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 MIR1323-201ENST00000408090 73 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU4-62P-201ENST00000410125 130 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 AL603825.1-201ENST00000438481 80 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC008267.6-201ENST00000441664 139 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU7-21P-201ENST00000459430 62 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC113410.1-201ENST00000505029 247 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms