Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.84□□□□□ -2.12
NR2E3Q9Y5X4 MIR302D-201ENST00000362275 68 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 SNORD33-201ENST00000362761 85 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 SNORA2.2-201ENST00000365473 135 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 MIR539-201ENST00000365690 78 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 Y_RNA.410-201ENST00000383992 113 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 Y_RNA.440-201ENST00000384120 114 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 RNU6-80P-201ENST00000384195 107 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 MIR136-201ENST00000385207 82 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 RNU2-51P-201ENST00000410708 197 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 SNORA31.4-201ENST00000516049 129 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 RNU6-659P-201ENST00000516454 104 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 Y_RNA.690-201ENST00000516603 95 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 AC011603.4-201ENST00000611325 277 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 MIR8063-201ENST00000621930 81 ntBASIC1.83□□□□□ -2.12
NR2E3Q9Y5X4 Y_RNA.114-201ENST00000363265 113 ntBASIC1.82□□□□□ -2.12
NR2E3Q9Y5X4 Y_RNA.205-201ENST00000364128 113 ntBASIC1.82□□□□□ -2.12
NR2E3Q9Y5X4 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
NR2E3Q9Y5X4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.82□□□□□ -2.12
NR2E3Q9Y5X4 MIR653-201ENST00000385279 96 ntBASIC1.82□□□□□ -2.12
NR2E3Q9Y5X4 RNU7-107P-201ENST00000459121 61 ntBASIC1.82□□□□□ -2.12
NR2E3Q9Y5X4 AC090049.2-201ENST00000550377 109 ntBASIC1.82□□□□□ -2.12
NR2E3Q9Y5X4 AC108081.1-201ENST00000604358 221 ntBASIC1.82□□□□□ -2.12
NR2E3Q9Y5X4 AL353770.2-201ENST00000620024 78 ntBASIC1.82□□□□□ -2.12
NR2E3Q9Y5X4 AC106754.2-201ENST00000623006 233 ntBASIC1.82□□□□□ -2.12
NR2E3Q9Y5X4 RNA5SP205-201ENST00000364653 136 ntBASIC1.81□□□□□ -2.12
NR2E3Q9Y5X4 SNORD1A-201ENST00000364968 72 ntBASIC1.81□□□□□ -2.12
NR2E3Q9Y5X4 RNU6-1189P-201ENST00000383958 107 ntBASIC1.81□□□□□ -2.12
NR2E3Q9Y5X4 MIR516B2-201ENST00000385190 85 ntBASIC1.81□□□□□ -2.12
NR2E3Q9Y5X4 MIR934-201ENST00000401241 83 ntBASIC1.81□□□□□ -2.12
NR2E3Q9Y5X4 AL158147.1-201ENST00000443970 75 ntBASIC1.81□□□□□ -2.12
NR2E3Q9Y5X4 RNU6-322P-201ENST00000516010 103 ntBASIC1.81□□□□□ -2.12
NR2E3Q9Y5X4 RNU6-1333P-201ENST00000516162 93 ntBASIC1.81□□□□□ -2.12
NR2E3Q9Y5X4 IGKV1-22-201ENST00000524313 326 ntBASIC1.81□□□□□ -2.12
NR2E3Q9Y5X4 AP003484.1-201ENST00000530974 250 ntBASIC1.81□□□□□ -2.12
NR2E3Q9Y5X4 MIR6078-201ENST00000611069 100 ntBASIC1.81□□□□□ -2.12
NR2E3Q9Y5X4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.81□□□□□ -2.12
NR2E3Q9Y5X4 RNU6-235P-201ENST00000362644 107 ntBASIC1.8□□□□□ -2.12
NR2E3Q9Y5X4 MIR517C-201ENST00000385103 95 ntBASIC1.8□□□□□ -2.12
NR2E3Q9Y5X4 RNU6-1154P-201ENST00000391001 104 ntBASIC1.8□□□□□ -2.12
NR2E3Q9Y5X4 Y_RNA.617-201ENST00000410920 90 ntBASIC1.8□□□□□ -2.12
NR2E3Q9Y5X4 AC008267.6-201ENST00000441664 139 ntBASIC1.8□□□□□ -2.12
NR2E3Q9Y5X4 AC087499.4-201ENST00000448505 178 ntBASIC1.8□□□□□ -2.12
NR2E3Q9Y5X4 AC079140.2-201ENST00000506193 142 ntBASIC1.8□□□□□ -2.12
NR2E3Q9Y5X4 RNU6-917P-201ENST00000516294 104 ntBASIC1.8□□□□□ -2.12
NR2E3Q9Y5X4 RNU6-62P-201ENST00000516526 102 ntBASIC1.8□□□□□ -2.12
NR2E3Q9Y5X4 Y_RNA.692-201ENST00000516627 105 ntBASIC1.8□□□□□ -2.12
NR2E3Q9Y5X4 AL022345.2-201ENST00000606307 135 ntBASIC1.8□□□□□ -2.12
NR2E3Q9Y5X4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
NR2E3Q9Y5X4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.79□□□□□ -2.12
NR2E3Q9Y5X4 RNU7-181P-201ENST00000517234 74 ntBASIC1.79□□□□□ -2.12
NR2E3Q9Y5X4 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
NR2E3Q9Y5X4 MIR4422-201ENST00000581938 83 ntBASIC1.79□□□□□ -2.12
NR2E3Q9Y5X4 FAM106DP-201ENST00000586416 501 ntBASIC1.79□□□□□ -2.12
NR2E3Q9Y5X4 AL513534.2-201ENST00000603836 250 ntBASIC1.79□□□□□ -2.12
NR2E3Q9Y5X4 RNU6-1081P-201ENST00000384537 107 ntBASIC1.78□□□□□ -2.12
NR2E3Q9Y5X4 Y_RNA.563-201ENST00000384707 108 ntBASIC1.78□□□□□ -2.12
NR2E3Q9Y5X4 U8.17-201ENST00000391292 132 ntBASIC1.78□□□□□ -2.12
NR2E3Q9Y5X4 AL451046.2-201ENST00000403074 277 ntBASIC1.78□□□□□ -2.12
NR2E3Q9Y5X4 RPS26P48-201ENST00000491713 339 ntBASIC1.78□□□□□ -2.12
NR2E3Q9Y5X4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.78□□□□□ -2.12
NR2E3Q9Y5X4 RNU2-13P-201ENST00000515909 113 ntBASIC1.78□□□□□ -2.12
NR2E3Q9Y5X4 RNU6-313P-201ENST00000516317 112 ntBASIC1.78□□□□□ -2.12
NR2E3Q9Y5X4 Y_RNA.712-201ENST00000517011 92 ntBASIC1.78□□□□□ -2.12
NR2E3Q9Y5X4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.78□□□□□ -2.12
NR2E3Q9Y5X4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.77□□□□□ -2.13
NR2E3Q9Y5X4 RNU6-1290P-201ENST00000362957 109 ntBASIC1.77□□□□□ -2.13
NR2E3Q9Y5X4 MIRLET7F2-201ENST00000385277 83 ntBASIC1.77□□□□□ -2.13
NR2E3Q9Y5X4 SNORD28B-201ENST00000390993 75 ntBASIC1.77□□□□□ -2.13
NR2E3Q9Y5X4 RNU1-78P-201ENST00000391248 165 ntBASIC1.77□□□□□ -2.13
NR2E3Q9Y5X4 Y_RNA.630-201ENST00000411370 108 ntBASIC1.77□□□□□ -2.13
NR2E3Q9Y5X4 SNX2P2-201ENST00000424553 323 ntBASIC1.77□□□□□ -2.13
NR2E3Q9Y5X4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.77□□□□□ -2.13
NR2E3Q9Y5X4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
NR2E3Q9Y5X4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NR2E3Q9Y5X4 RNU6-349P-201ENST00000362402 107 ntBASIC1.76□□□□□ -2.13
NR2E3Q9Y5X4 SNORD18B-201ENST00000365659 72 ntBASIC1.76□□□□□ -2.13
NR2E3Q9Y5X4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.76□□□□□ -2.13
NR2E3Q9Y5X4 SNORA40.5-201ENST00000391061 128 ntBASIC1.76□□□□□ -2.13
NR2E3Q9Y5X4 RNU6-735P-201ENST00000410612 107 ntBASIC1.76□□□□□ -2.13
NR2E3Q9Y5X4 AC027119.1-201ENST00000440877 241 ntBASIC1.76□□□□□ -2.13
NR2E3Q9Y5X4 RNU6-772P-201ENST00000516042 105 ntBASIC1.76□□□□□ -2.13
NR2E3Q9Y5X4 RNU6-781P-201ENST00000516377 101 ntBASIC1.76□□□□□ -2.13
NR2E3Q9Y5X4 SNORA31.24-201ENST00000517232 57 ntBASIC1.76□□□□□ -2.13
NR2E3Q9Y5X4 Y_RNA.757-201ENST00000578934 114 ntBASIC1.76□□□□□ -2.13
NR2E3Q9Y5X4 MIR3618-201ENST00000580330 88 ntBASIC1.76□□□□□ -2.13
NR2E3Q9Y5X4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
NR2E3Q9Y5X4 RNU6-53P-201ENST00000365367 106 ntBASIC1.75□□□□□ -2.13
NR2E3Q9Y5X4 POLR2J4-204ENST00000418424 324 ntBASIC1.75□□□□□ -2.13
NR2E3Q9Y5X4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.75□□□□□ -2.13
NR2E3Q9Y5X4 SNORD123-201ENST00000459473 70 ntBASIC1.75□□□□□ -2.13
NR2E3Q9Y5X4 MIR3937-201ENST00000580135 106 ntBASIC1.75□□□□□ -2.13
NR2E3Q9Y5X4 MIR548AR-201ENST00000582191 57 ntBASIC1.75□□□□□ -2.13
NR2E3Q9Y5X4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
NR2E3Q9Y5X4 MIR3914-2-201ENST00000637339 95 ntBASIC1.75□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-34-201ENST00000362441 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-12-201ENST00000362583 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-29-201ENST00000362834 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-9-201ENST00000362912 82 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms