Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 SNORD13-201ENST00000459299 104 ntBASIC1.57□□□□□ -2.16
PCDHA3Q9Y5H8 Y_RNA.686-201ENST00000516548 134 ntBASIC1.57□□□□□ -2.16
PCDHA3Q9Y5H8 Y_RNA.690-201ENST00000516603 95 ntBASIC1.57□□□□□ -2.16
PCDHA3Q9Y5H8 RNU6-113P-201ENST00000516653 101 ntBASIC1.57□□□□□ -2.16
PCDHA3Q9Y5H8 RN7SKP88-201ENST00000516847 250 ntBASIC1.57□□□□□ -2.16
PCDHA3Q9Y5H8 AP003716.2-201ENST00000528260 108 ntBASIC1.57□□□□□ -2.16
PCDHA3Q9Y5H8 AC011603.4-201ENST00000611325 277 ntBASIC1.57□□□□□ -2.16
PCDHA3Q9Y5H8 7SK.8-201ENST00000612110 250 ntBASIC1.57□□□□□ -2.16
PCDHA3Q9Y5H8 7SK.11-201ENST00000615477 250 ntBASIC1.57□□□□□ -2.16
PCDHA3Q9Y5H8 7SK.13-201ENST00000622040 250 ntBASIC1.57□□□□□ -2.16
PCDHA3Q9Y5H8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 MIR302B-201ENST00000362188 73 ntBASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 MIR342-201ENST00000362212 99 ntBASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 SNORA40-201ENST00000388090 126 ntBASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 MIR1323-201ENST00000408090 73 ntBASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 RNA5SP61-201ENST00000516453 100 ntBASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 Y_RNA.692-201ENST00000516627 105 ntBASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 MIR3121-201ENST00000579680 77 ntBASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 AP001485.1-201ENST00000604799 199 ntBASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 MIR8055-201ENST00000610739 97 ntBASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 TUG1_4.1-201ENST00000619464 181 ntBASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 AL596211.1-201ENST00000569873 2277 ntBASIC1.56□□□□□ -2.16
PCDHA3Q9Y5H8 RNU6-309P-201ENST00000364573 106 ntBASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 SNORA20-201ENST00000384662 132 ntBASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 RNU6-913P-201ENST00000390913 95 ntBASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 RNU6-257P-201ENST00000410238 98 ntBASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 AC009474.2-201ENST00000451383 136 ntBASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 RNU1-98P-201ENST00000458992 160 ntBASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 SNORA31.4-201ENST00000516049 129 ntBASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 RNA5SP272-201ENST00000516095 111 ntBASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 CYP3A52P-201ENST00000563326 91 ntBASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 AP000942.3-201ENST00000603702 160 ntBASIC1.55□□□□□ -2.16
PCDHA3Q9Y5H8 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
PCDHA3Q9Y5H8 RNA5SP261-201ENST00000410536 106 ntBASIC1.54□□□□□ -2.16
PCDHA3Q9Y5H8 MTND4LP9-201ENST00000427694 174 ntBASIC1.54□□□□□ -2.16
PCDHA3Q9Y5H8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.54□□□□□ -2.16
PCDHA3Q9Y5H8 MIR548AO-201ENST00000579992 96 ntBASIC1.54□□□□□ -2.16
PCDHA3Q9Y5H8 PRELID3BP2-201ENST00000605362 201 ntBASIC1.54□□□□□ -2.16
PCDHA3Q9Y5H8 AL022345.2-201ENST00000606307 135 ntBASIC1.54□□□□□ -2.16
PCDHA3Q9Y5H8 U7.2-201ENST00000607576 63 ntBASIC1.54□□□□□ -2.16
PCDHA3Q9Y5H8 RNU6-349P-201ENST00000362402 107 ntBASIC1.53□□□□□ -2.16
PCDHA3Q9Y5H8 RNY1P6-201ENST00000384193 109 ntBASIC1.53□□□□□ -2.16
PCDHA3Q9Y5H8 RNU6-1319P-201ENST00000390855 104 ntBASIC1.53□□□□□ -2.16
PCDHA3Q9Y5H8 RNU6-747P-201ENST00000390928 104 ntBASIC1.53□□□□□ -2.16
PCDHA3Q9Y5H8 SNORA67.5-201ENST00000391036 107 ntBASIC1.53□□□□□ -2.16
PCDHA3Q9Y5H8 Y_RNA.586-201ENST00000391146 98 ntBASIC1.53□□□□□ -2.16
PCDHA3Q9Y5H8 RNU6-241P-201ENST00000391148 104 ntBASIC1.53□□□□□ -2.16
PCDHA3Q9Y5H8 RNU6-177P-201ENST00000411257 104 ntBASIC1.53□□□□□ -2.16
PCDHA3Q9Y5H8 Y_RNA.651-201ENST00000459380 103 ntBASIC1.53□□□□□ -2.16
PCDHA3Q9Y5H8 RNU11-2P-201ENST00000516898 142 ntBASIC1.53□□□□□ -2.16
PCDHA3Q9Y5H8 Y_RNA.757-201ENST00000578934 114 ntBASIC1.53□□□□□ -2.16
PCDHA3Q9Y5H8 AL020996.3-201ENST00000606617 222 ntBASIC1.53□□□□□ -2.16
PCDHA3Q9Y5H8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.52□□□□□ -2.17
PCDHA3Q9Y5H8 AC245047.7-201ENST00000440265 293 ntBASIC1.52□□□□□ -2.17
PCDHA3Q9Y5H8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.52□□□□□ -2.17
PCDHA3Q9Y5H8 MIR3152-201ENST00000579801 74 ntBASIC1.52□□□□□ -2.17
PCDHA3Q9Y5H8 MIR8065-201ENST00000620577 100 ntBASIC1.52□□□□□ -2.17
PCDHA3Q9Y5H8 Z97988.1-201ENST00000637697 135 ntBASIC1.52□□□□□ -2.17
PCDHA3Q9Y5H8 RNA5SP264-201ENST00000363115 107 ntBASIC1.51□□□□□ -2.17
PCDHA3Q9Y5H8 RNU6-508P-201ENST00000363231 103 ntBASIC1.51□□□□□ -2.17
PCDHA3Q9Y5H8 SNORA26.6-201ENST00000391256 115 ntBASIC1.51□□□□□ -2.17
PCDHA3Q9Y5H8 MIR1302-7-201ENST00000408841 72 ntBASIC1.51□□□□□ -2.17
PCDHA3Q9Y5H8 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
PCDHA3Q9Y5H8 AL603825.1-201ENST00000438481 80 ntBASIC1.51□□□□□ -2.17
PCDHA3Q9Y5H8 AC091895.1-201ENST00000624494 256 ntBASIC1.51□□□□□ -2.17
PCDHA3Q9Y5H8 RNU6-60P-201ENST00000364792 103 ntBASIC1.5□□□□□ -2.17
PCDHA3Q9Y5H8 MIR539-201ENST00000365690 78 ntBASIC1.5□□□□□ -2.17
PCDHA3Q9Y5H8 Y_RNA.430-201ENST00000384081 110 ntBASIC1.5□□□□□ -2.17
PCDHA3Q9Y5H8 AC108667.1-201ENST00000428618 249 ntBASIC1.5□□□□□ -2.17
PCDHA3Q9Y5H8 TMSB4XP3-201ENST00000445144 114 ntBASIC1.5□□□□□ -2.17
PCDHA3Q9Y5H8 AC048334.1-201ENST00000477975 159 ntBASIC1.5□□□□□ -2.17
PCDHA3Q9Y5H8 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
PCDHA3Q9Y5H8 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
PCDHA3Q9Y5H8 MIR6717-201ENST00000622747 73 ntBASIC1.5□□□□□ -2.17
PCDHA3Q9Y5H8 AC021613.1-201ENST00000623880 111 ntBASIC1.5□□□□□ -2.17
PCDHA3Q9Y5H8 SNORA25.3-201ENST00000363205 127 ntBASIC1.49□□□□□ -2.17
PCDHA3Q9Y5H8 Y_RNA.280-201ENST00000364765 112 ntBASIC1.49□□□□□ -2.17
PCDHA3Q9Y5H8 SNORA67.6-201ENST00000391093 99 ntBASIC1.49□□□□□ -2.17
PCDHA3Q9Y5H8 MIR1185-1-201ENST00000408598 86 ntBASIC1.49□□□□□ -2.17
PCDHA3Q9Y5H8 RNU6-893P-201ENST00000458841 100 ntBASIC1.49□□□□□ -2.17
PCDHA3Q9Y5H8 SNORA31.24-201ENST00000517232 57 ntBASIC1.49□□□□□ -2.17
PCDHA3Q9Y5H8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.49□□□□□ -2.17
PCDHA3Q9Y5H8 SNORA1.1-201ENST00000364671 133 ntBASIC1.48□□□□□ -2.17
PCDHA3Q9Y5H8 SNORA17.3-201ENST00000391159 129 ntBASIC1.48□□□□□ -2.17
PCDHA3Q9Y5H8 SNORA31.2-201ENST00000516019 134 ntBASIC1.48□□□□□ -2.17
PCDHA3Q9Y5H8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.48□□□□□ -2.17
PCDHA3Q9Y5H8 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
PCDHA3Q9Y5H8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.48□□□□□ -2.17
PCDHA3Q9Y5H8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PCDHA3Q9Y5H8 MIR103A2-201ENST00000362154 78 ntBASIC1.47□□□□□ -2.17
PCDHA3Q9Y5H8 MIR378A-201ENST00000362177 66 ntBASIC1.47□□□□□ -2.17
PCDHA3Q9Y5H8 Y_RNA.114-201ENST00000363265 113 ntBASIC1.47□□□□□ -2.17
PCDHA3Q9Y5H8 RNU6-690P-201ENST00000365242 106 ntBASIC1.47□□□□□ -2.17
PCDHA3Q9Y5H8 RNU6-396P-201ENST00000365369 105 ntBASIC1.47□□□□□ -2.17
PCDHA3Q9Y5H8 RNU6-81P-201ENST00000365608 104 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms