| SALL2 | Q9Y467 | MIR34C-201 | ENST00000384831 | 77 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | SPINT5P-201 | ENST00000448174 | 155 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU1-98P-201 | ENST00000458992 | 160 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU6-1006P-201 | ENST00000516998 | 103 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | AC005786.1-201 | ENST00000588553 | 154 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU6-90P-201 | ENST00000606352 | 106 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | SEPT14P17-201 | ENST00000617978 | 177 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | ZMYM1-201 | ENST00000359858 | 4175 nt | APPRIS P1 TSL 1 (best) BASIC | 3.32 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU6-524P-201 | ENST00000384270 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | HMGN1P33-201 | ENST00000432945 | 451 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU7-73P-201 | ENST00000458743 | 63 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | MIR548AR-201 | ENST00000582191 | 57 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | ZMYM2-203 | ENST00000382874 | 10139 nt | APPRIS P1 TSL 1 (best) BASIC | 3.31 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | ZNF451-208 | ENST00000491832 | 3632 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.31 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | KBTBD3-207 | ENST00000534815 | 3396 nt | TSL 5 BASIC | 3.31 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | AL442644.1-201 | ENST00000454390 | 3105 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | OR2L2-203 | ENST00000642011 | 4225 nt | APPRIS P1 BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | DYNC2H1-202 | ENST00000375735 | 13678 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | CHORDC1-205 | ENST00000529726 | 4805 nt | TSL 2 BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | THOC2-216 | ENST00000491737 | 4452 nt | TSL 5 BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | PCM1-222 | ENST00000524226 | 5955 nt | TSL 1 (best) BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | SNORD115-27-201 | ENST00000364430 | 82 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU1-51P-201 | ENST00000365345 | 176 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU6-342P-201 | ENST00000384521 | 104 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU6-1067P-201 | ENST00000384752 | 107 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | MIR548G-201 | ENST00000408442 | 89 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNA5SP148-201 | ENST00000516527 | 94 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | MIR5194-201 | ENST00000582634 | 120 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | WARS-244 | ENST00000627608 | 123 nt | TSL 5 BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | OXR1-215 | ENST00000531443 | 3599 nt | TSL 5 BASIC | 3.3 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | HIF1A-201 | ENST00000323441 | 3555 nt | TSL 1 (best) BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | SNORD115-37-201 | ENST00000363768 | 82 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU6-461P-201 | ENST00000364195 | 107 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | Y_RNA.448-201 | ENST00000384185 | 108 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | MIR627-201 | ENST00000384979 | 97 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | MIR519C-201 | ENST00000385053 | 87 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | SNORD28B-201 | ENST00000390993 | 75 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU6-1307P-201 | ENST00000391012 | 103 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RPL31P63-201 | ENST00000422565 | 375 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | AL354733.1-201 | ENST00000458016 | 476 nt | TSL 3 BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | AC093729.1-201 | ENST00000513074 | 128 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | PLD1-217 | ENST00000627725 | 174 nt | TSL 5 BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | LIFR-201 | ENST00000263409 | 10089 nt | APPRIS P1 TSL 1 (best) BASIC | 3.29 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | CFH-202 | ENST00000367429 | 4127 nt | APPRIS P1 TSL 1 (best) BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | SACS-201 | ENST00000382292 | 15324 nt | APPRIS P1 TSL 5 BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU6-1244P-201 | ENST00000363614 | 108 nt | BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNA5SP68-201 | ENST00000363885 | 119 nt | BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | SNORA24-201 | ENST00000384096 | 131 nt | BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | Y_RNA.565-201 | ENST00000384719 | 101 nt | BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU6ATAC41P-201 | ENST00000408600 | 126 nt | BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU6-1086P-201 | ENST00000410930 | 100 nt | BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNA5SP184-201 | ENST00000411071 | 108 nt | BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | AL353795.2-201 | ENST00000431804 | 425 nt | TSL 2 BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | AL161932.1-201 | ENST00000437408 | 146 nt | BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | MIR3616-201 | ENST00000584070 | 92 nt | BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | COMMD6-213 | ENST00000626103 | 120 nt | TSL 5 BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | LINC01790-201 | ENST00000447194 | 2852 nt | TSL 2 BASIC | 3.28 | □□□□□ -1.88 | | |
| SALL2 | Q9Y467 | RNU1-58P-201 | ENST00000362413 | 163 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | TRAJ41-201 | ENST00000390496 | 62 nt | APPRIS P1 BASIC | 3.27 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | SNORD123-201 | ENST00000459473 | 70 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | MTND5P40-201 | ENST00000559945 | 246 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | MIR4712-201 | ENST00000583750 | 82 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | AC105081.1-201 | ENST00000617727 | 106 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | U4atac.1-201 | ENST00000618345 | 95 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | AGL-204 | ENST00000370161 | 6923 nt | TSL 5 BASIC | 3.27 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | MUC15-202 | ENST00000436318 | 3118 nt | TSL 5 BASIC | 3.27 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | AP006437.1-201 | ENST00000641440 | 3685 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | RNA5SP138-201 | ENST00000365098 | 114 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | MIR6817-201 | ENST00000615588 | 66 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | KTN1-203 | ENST00000395309 | 4021 nt | APPRIS ALT2 TSL 5 BASIC | 3.26 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | GPR22-201 | ENST00000304402 | 2942 nt | APPRIS P1 TSL 1 (best) BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | ZBBX-204 | ENST00000392767 | 3071 nt | APPRIS ALT2 TSL 5 BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | SNORD38.2-201 | ENST00000384470 | 69 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | RNU6-1031P-201 | ENST00000384773 | 107 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | MIR27B-201 | ENST00000385129 | 97 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | RNU2-7P-201 | ENST00000410794 | 178 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | AC073127.1-201 | ENST00000447336 | 333 nt | TSL 3 BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | COX7A2-206 | ENST00000472311 | 325 nt | TSL 2 BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | AC079804.2-201 | ENST00000490376 | 200 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | AC234781.5-201 | ENST00000508429 | 271 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | SNORD67.1-201 | ENST00000516618 | 108 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | MIR6840-201 | ENST00000611937 | 71 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | DENND4A-202 | ENST00000443035 | 8665 nt | TSL 1 (best) BASIC | 3.25 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | DNAH14-210 | ENST00000439375 | 13548 nt | APPRIS P1 TSL 5 BASIC | 3.24 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | MIR21-201 | ENST00000362134 | 72 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | SNORD114-30-201 | ENST00000364448 | 72 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | RNU1-91P-201 | ENST00000364746 | 163 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | MIR524-201 | ENST00000385242 | 87 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | BX510359.4-201 | ENST00000423750 | 193 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | RNU7-79P-201 | ENST00000516082 | 62 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | RNU7-35P-201 | ENST00000517174 | 62 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | MIR6895-201 | ENST00000613497 | 78 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | AC022202.1-201 | ENST00000613515 | 211 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | PRKACB-204 | ENST00000370685 | 4481 nt | APPRIS P4 TSL 1 (best) BASIC | 3.23 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | Y_RNA.354-201 | ENST00000365448 | 111 nt | BASIC | 3.23 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | MIR29C-201 | ENST00000385231 | 88 nt | BASIC | 3.23 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | AL513043.2-201 | ENST00000573941 | 143 nt | BASIC | 3.23 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | MIR5092-201 | ENST00000583139 | 88 nt | BASIC | 3.23 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | HAS2-201 | ENST00000303924 | 4190 nt | APPRIS P1 TSL 1 (best) BASIC | 3.22 | □□□□□ -1.89 | | |
| SALL2 | Q9Y467 | RNU11-3P-201 | ENST00000391111 | 133 nt | BASIC | 3.22 | □□□□□ -1.89 | | |