Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC245517.4-201ENST00000448601 281 ntBASIC1.96□□□□□ -2.1
R3HCC1Q9Y3T6 AC009474.2-201ENST00000451383 136 ntBASIC1.96□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-548P-201ENST00000517083 115 ntBASIC1.96□□□□□ -2.1
R3HCC1Q9Y3T6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.96□□□□□ -2.1
R3HCC1Q9Y3T6 MIR6715A-201ENST00000615929 79 ntBASIC1.96□□□□□ -2.1
R3HCC1Q9Y3T6 Y_RNA.366-201ENST00000365540 102 ntBASIC1.95□□□□□ -2.1
R3HCC1Q9Y3T6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
R3HCC1Q9Y3T6 SNORA26.6-201ENST00000391256 115 ntBASIC1.95□□□□□ -2.1
R3HCC1Q9Y3T6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.95□□□□□ -2.1
R3HCC1Q9Y3T6 snoU13.16-201ENST00000459350 104 ntBASIC1.95□□□□□ -2.1
R3HCC1Q9Y3T6 RPL30P7-201ENST00000479312 323 ntBASIC1.95□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-113P-201ENST00000516653 101 ntBASIC1.95□□□□□ -2.1
R3HCC1Q9Y3T6 MIR3618-201ENST00000580330 88 ntBASIC1.95□□□□□ -2.1
R3HCC1Q9Y3T6 AL020996.3-201ENST00000606617 222 ntBASIC1.95□□□□□ -2.1
R3HCC1Q9Y3T6 SNORA25.3-201ENST00000363205 127 ntBASIC1.94□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-690P-201ENST00000365242 106 ntBASIC1.94□□□□□ -2.1
R3HCC1Q9Y3T6 Y_RNA.525-201ENST00000384570 113 ntBASIC1.94□□□□□ -2.1
R3HCC1Q9Y3T6 SNORA26.9-201ENST00000391322 122 ntBASIC1.94□□□□□ -2.1
R3HCC1Q9Y3T6 RNU7-107P-201ENST00000459121 61 ntBASIC1.94□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-902P-201ENST00000517212 91 ntBASIC1.94□□□□□ -2.1
R3HCC1Q9Y3T6 MIR8055-201ENST00000610739 97 ntBASIC1.94□□□□□ -2.1
R3HCC1Q9Y3T6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.94□□□□□ -2.1
R3HCC1Q9Y3T6 MIR7843-201ENST00000622274 79 ntBASIC1.94□□□□□ -2.1
R3HCC1Q9Y3T6 AC084768.2-201ENST00000622736 221 ntBASIC1.94□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-80P-201ENST00000384195 107 ntBASIC1.93□□□□□ -2.1
R3HCC1Q9Y3T6 AC003989.2-201ENST00000440224 169 ntBASIC1.93□□□□□ -2.1
R3HCC1Q9Y3T6 RPL39P39-201ENST00000455840 151 ntBASIC1.93□□□□□ -2.1
R3HCC1Q9Y3T6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.93□□□□□ -2.1
R3HCC1Q9Y3T6 SNORA25.15-201ENST00000516487 89 ntBASIC1.93□□□□□ -2.1
R3HCC1Q9Y3T6 MIR6845-201ENST00000613182 61 ntBASIC1.93□□□□□ -2.1
R3HCC1Q9Y3T6 AC021613.1-201ENST00000623880 111 ntBASIC1.93□□□□□ -2.1
R3HCC1Q9Y3T6 RNA5SP48-201ENST00000363969 126 ntBASIC1.92□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-997P-201ENST00000384725 107 ntBASIC1.92□□□□□ -2.1
R3HCC1Q9Y3T6 MIR1302-7-201ENST00000408841 72 ntBASIC1.92□□□□□ -2.1
R3HCC1Q9Y3T6 Y_RNA.617-201ENST00000410920 90 ntBASIC1.92□□□□□ -2.1
R3HCC1Q9Y3T6 AC090844.1-201ENST00000422019 156 ntBASIC1.92□□□□□ -2.1
R3HCC1Q9Y3T6 MIR4285-201ENST00000581001 85 ntBASIC1.92□□□□□ -2.1
R3HCC1Q9Y3T6 MIR502-201ENST00000606349 86 ntBASIC1.92□□□□□ -2.1
R3HCC1Q9Y3T6 AL365222.1-201ENST00000614661 98 ntBASIC1.92□□□□□ -2.1
R3HCC1Q9Y3T6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-647P-201ENST00000364243 107 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-1319P-201ENST00000390855 104 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-747P-201ENST00000390928 104 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-241P-201ENST00000391148 104 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-177P-201ENST00000411257 104 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 RN7SKP19-201ENST00000516016 252 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-781P-201ENST00000516377 101 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 AC133485.4-201ENST00000561835 220 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 CYP3A52P-201ENST00000563326 91 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 AC138907.4-201ENST00000570107 226 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 AP000942.3-201ENST00000603702 160 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 AL121890.5-201ENST00000620848 304 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 MIR6717-201ENST00000622747 73 ntBASIC1.91□□□□□ -2.1
R3HCC1Q9Y3T6 RNU6-1117P-201ENST00000384525 104 ntBASIC1.9□□□□□ -2.11
R3HCC1Q9Y3T6 RN7SKP88-201ENST00000516847 250 ntBASIC1.9□□□□□ -2.11
R3HCC1Q9Y3T6 AP003716.2-201ENST00000528260 108 ntBASIC1.9□□□□□ -2.11
R3HCC1Q9Y3T6 7SK.8-201ENST00000612110 250 ntBASIC1.9□□□□□ -2.11
R3HCC1Q9Y3T6 7SK.11-201ENST00000615477 250 ntBASIC1.9□□□□□ -2.11
R3HCC1Q9Y3T6 AL137067.1-201ENST00000615933 120 ntBASIC1.9□□□□□ -2.11
R3HCC1Q9Y3T6 7SK.13-201ENST00000622040 250 ntBASIC1.9□□□□□ -2.11
R3HCC1Q9Y3T6 Y_RNA.261-201ENST00000364631 102 ntBASIC1.89□□□□□ -2.11
R3HCC1Q9Y3T6 SNORD116-14-201ENST00000383894 92 ntBASIC1.89□□□□□ -2.11
R3HCC1Q9Y3T6 SNORD116-17-201ENST00000383929 92 ntBASIC1.89□□□□□ -2.11
R3HCC1Q9Y3T6 RNU6-22P-201ENST00000384355 107 ntBASIC1.89□□□□□ -2.11
R3HCC1Q9Y3T6 SNORD116-15-201ENST00000384445 92 ntBASIC1.89□□□□□ -2.11
R3HCC1Q9Y3T6 SNORD116-19-201ENST00000384729 92 ntBASIC1.89□□□□□ -2.11
R3HCC1Q9Y3T6 MIR9-3-201ENST00000385084 90 ntBASIC1.89□□□□□ -2.11
R3HCC1Q9Y3T6 AL591806.2-201ENST00000433122 173 ntBASIC1.89□□□□□ -2.11
R3HCC1Q9Y3T6 AL133373.1-201ENST00000497098 94 ntBASIC1.89□□□□□ -2.11
R3HCC1Q9Y3T6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.89□□□□□ -2.11
R3HCC1Q9Y3T6 AC021443.1-201ENST00000604478 211 ntBASIC1.89□□□□□ -2.11
R3HCC1Q9Y3T6 Y_RNA.127-201ENST00000363386 109 ntBASIC1.88□□□□□ -2.11
R3HCC1Q9Y3T6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.88□□□□□ -2.11
R3HCC1Q9Y3T6 POLR2J4-204ENST00000418424 324 ntBASIC1.88□□□□□ -2.11
R3HCC1Q9Y3T6 AC048334.1-201ENST00000477975 159 ntBASIC1.88□□□□□ -2.11
R3HCC1Q9Y3T6 RNU6-772P-201ENST00000516042 105 ntBASIC1.88□□□□□ -2.11
R3HCC1Q9Y3T6 RNU6-1333P-201ENST00000516162 93 ntBASIC1.88□□□□□ -2.11
R3HCC1Q9Y3T6 RNU2-35P-201ENST00000516446 142 ntBASIC1.88□□□□□ -2.11
R3HCC1Q9Y3T6 RNU6-659P-201ENST00000516454 104 ntBASIC1.88□□□□□ -2.11
R3HCC1Q9Y3T6 MIR4305-201ENST00000583252 102 ntBASIC1.88□□□□□ -2.11
R3HCC1Q9Y3T6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.88□□□□□ -2.11
R3HCC1Q9Y3T6 Z97988.1-201ENST00000637697 135 ntBASIC1.88□□□□□ -2.11
R3HCC1Q9Y3T6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
R3HCC1Q9Y3T6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
R3HCC1Q9Y3T6 SNORA1.1-201ENST00000364671 133 ntBASIC1.87□□□□□ -2.11
R3HCC1Q9Y3T6 MIR1185-1-201ENST00000408598 86 ntBASIC1.87□□□□□ -2.11
R3HCC1Q9Y3T6 RNA5SP144-201ENST00000410846 116 ntBASIC1.87□□□□□ -2.11
R3HCC1Q9Y3T6 Y_RNA.630-201ENST00000411370 108 ntBASIC1.87□□□□□ -2.11
R3HCC1Q9Y3T6 AC108210.2-201ENST00000503681 201 ntBASIC1.87□□□□□ -2.11
R3HCC1Q9Y3T6 RNU6-1061P-201ENST00000516530 99 ntBASIC1.87□□□□□ -2.11
R3HCC1Q9Y3T6 RNU6-1258P-201ENST00000516911 111 ntBASIC1.87□□□□□ -2.11
R3HCC1Q9Y3T6 MIR6841-201ENST00000637129 72 ntBASIC1.87□□□□□ -2.11
R3HCC1Q9Y3T6 SNORD58C-201ENST00000365223 64 ntBASIC1.86□□□□□ -2.11
R3HCC1Q9Y3T6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.86□□□□□ -2.11
R3HCC1Q9Y3T6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.86□□□□□ -2.11
R3HCC1Q9Y3T6 MIR8081-201ENST00000611533 95 ntBASIC1.86□□□□□ -2.11
R3HCC1Q9Y3T6 RNA5SP264-201ENST00000363115 107 ntBASIC1.85□□□□□ -2.11
R3HCC1Q9Y3T6 RNU6-602P-201ENST00000411155 105 ntBASIC1.85□□□□□ -2.11
R3HCC1Q9Y3T6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.85□□□□□ -2.11
R3HCC1Q9Y3T6 AC008267.6-201ENST00000441664 139 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms