Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM35Q9UPQ4 Y_RNA.42-201ENST00000362660 108 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 RNU6-340P-201ENST00000364005 107 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 RN7SL75P-201ENST00000461926 281 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 MIR3675-201ENST00000583661 73 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 MIR8053-201ENST00000613344 75 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 AL662814.1-201ENST00000617364 121 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 AL161722.3-201ENST00000605789 2983 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM35Q9UPQ4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM35Q9UPQ4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM35Q9UPQ4 RNU6-1031P-201ENST00000384773 107 ntBASIC3.85□□□□□ -1.79
TRIM35Q9UPQ4 AC245166.1-201ENST00000521012 253 ntBASIC3.85□□□□□ -1.79
TRIM35Q9UPQ4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM35Q9UPQ4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 MIR337-201ENST00000362281 93 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 Y_RNA.371-201ENST00000365591 113 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 SNORD38B-201ENST00000384690 67 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 MIR516A2-201ENST00000384888 90 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 MIR516A1-201ENST00000385033 90 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 EIF4BP1-201ENST00000554881 351 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 SNORD38B-202ENST00000625943 69 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 UQCRHP3-201ENST00000451503 251 ntBASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 RN7SL633P-201ENST00000488974 297 ntBASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 SNORA74.3-201ENST00000517108 154 ntBASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 AC005786.1-201ENST00000588553 154 ntBASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 SNORA68.1-201ENST00000364537 132 ntBASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 HMGN2P39-201ENST00000398005 273 ntBASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 RNA5SP274-201ENST00000410484 108 ntBASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 EEF1A1P41-201ENST00000414667 207 ntBASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 AC008133.2-201ENST00000624540 351 ntBASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 U6.109-201ENST00000636749 87 ntBASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 RNU6-1216P-201ENST00000362590 107 ntBASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 Y_RNA.236-201ENST00000364427 111 ntBASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 SNORD116-24-201ENST00000384549 92 ntBASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 RNU2-7P-201ENST00000410794 178 ntBASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 AC069503.3-201ENST00000618674 145 ntBASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 MIR7153-201ENST00000637758 57 ntBASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 RNA5SP139-201ENST00000364340 117 ntBASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 RNU1-109P-201ENST00000383960 147 ntBASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 AC003685.2-201ENST00000422795 395 ntBASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 RNU7-43P-201ENST00000516554 64 ntBASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 SNORD115-3-201ENST00000363100 82 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 Y_RNA.119-201ENST00000363301 96 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 RNU6-829P-201ENST00000363700 112 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 SNORA80A-201ENST00000363922 136 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 Y_RNA.207-201ENST00000364142 106 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 SNORD115-22-201ENST00000364456 82 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 RNU6-1051P-201ENST00000365471 102 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 AL023284.1-201ENST00000403956 276 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 RPS29P6-201ENST00000438196 145 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 AC245517.4-201ENST00000448601 281 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 RPS27P29-201ENST00000463110 252 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 HMGN2P7-201ENST00000456186 273 ntBASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 SNORA59A-201ENST00000459326 152 ntBASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 RNU6-711P-201ENST00000517255 106 ntBASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 AC079600.2-201ENST00000550076 130 ntBASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 AC121758.2-201ENST00000553271 193 ntBASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 MIR548AO-201ENST00000579992 96 ntBASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM35Q9UPQ4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM35Q9UPQ4 SNORD45.1-201ENST00000363181 77 ntBASIC3.77□□□□□ -1.81
TRIM35Q9UPQ4 AC019129.1-201ENST00000403786 261 ntBASIC3.77□□□□□ -1.81
TRIM35Q9UPQ4 AL513423.1-201ENST00000621695 132 ntBASIC3.77□□□□□ -1.81
TRIM35Q9UPQ4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM35Q9UPQ4 RNU6-957P-201ENST00000363652 99 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms