Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
DDX41Q9UJV9 MIR302D-201ENST00000362275 68 ntBASIC2.14□□□□□ -2.07
DDX41Q9UJV9 Y_RNA.4-201ENST00000362333 112 ntBASIC2.14□□□□□ -2.07
DDX41Q9UJV9 RNU6-508P-201ENST00000363231 103 ntBASIC2.14□□□□□ -2.07
DDX41Q9UJV9 Y_RNA.127-201ENST00000363386 109 ntBASIC2.14□□□□□ -2.07
DDX41Q9UJV9 Y_RNA.164-201ENST00000363709 102 ntBASIC2.14□□□□□ -2.07
DDX41Q9UJV9 RNU6-1154P-201ENST00000391001 104 ntBASIC2.14□□□□□ -2.07
DDX41Q9UJV9 RNA5SP247-201ENST00000411181 105 ntBASIC2.14□□□□□ -2.07
DDX41Q9UJV9 AC003989.2-201ENST00000440224 169 ntBASIC2.14□□□□□ -2.07
DDX41Q9UJV9 RNU6-479P-201ENST00000516348 105 ntBASIC2.14□□□□□ -2.07
DDX41Q9UJV9 RNU6-1234P-201ENST00000516877 103 ntBASIC2.14□□□□□ -2.07
DDX41Q9UJV9 AC019176.1-201ENST00000518519 225 ntBASIC2.14□□□□□ -2.07
DDX41Q9UJV9 MIR4422-201ENST00000581938 83 ntBASIC2.14□□□□□ -2.07
DDX41Q9UJV9 Y_RNA.218-201ENST00000364218 104 ntBASIC2.13□□□□□ -2.07
DDX41Q9UJV9 SNORD41-201ENST00000386967 70 ntBASIC2.13□□□□□ -2.07
DDX41Q9UJV9 MIR548I2-201ENST00000408348 149 ntBASIC2.13□□□□□ -2.07
DDX41Q9UJV9 RNU6-893P-201ENST00000458841 100 ntBASIC2.13□□□□□ -2.07
DDX41Q9UJV9 RPL30P7-201ENST00000479312 323 ntBASIC2.13□□□□□ -2.07
DDX41Q9UJV9 RNU6-1333P-201ENST00000516162 93 ntBASIC2.13□□□□□ -2.07
DDX41Q9UJV9 RNU6-1061P-201ENST00000516530 99 ntBASIC2.13□□□□□ -2.07
DDX41Q9UJV9 RNU6-250P-201ENST00000516958 103 ntBASIC2.13□□□□□ -2.07
DDX41Q9UJV9 DNAJC19P9-201ENST00000555084 351 ntBASIC2.13□□□□□ -2.07
DDX41Q9UJV9 MIR3122-201ENST00000577243 73 ntBASIC2.13□□□□□ -2.07
DDX41Q9UJV9 AL137067.1-201ENST00000615933 120 ntBASIC2.13□□□□□ -2.07
DDX41Q9UJV9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.13□□□□□ -2.07
DDX41Q9UJV9 RNA5SP48-201ENST00000363969 126 ntBASIC2.12□□□□□ -2.07
DDX41Q9UJV9 Y_RNA.280-201ENST00000364765 112 ntBASIC2.12□□□□□ -2.07
DDX41Q9UJV9 RNU1-78P-201ENST00000391248 165 ntBASIC2.12□□□□□ -2.07
DDX41Q9UJV9 RNU2-51P-201ENST00000410708 197 ntBASIC2.12□□□□□ -2.07
DDX41Q9UJV9 RNU6-240P-201ENST00000516098 97 ntBASIC2.12□□□□□ -2.07
DDX41Q9UJV9 RNU6-947P-201ENST00000516264 106 ntBASIC2.12□□□□□ -2.07
DDX41Q9UJV9 MIR4251-201ENST00000635819 61 ntBASIC2.12□□□□□ -2.07
DDX41Q9UJV9 RNU6-349P-201ENST00000362402 107 ntBASIC2.11□□□□□ -2.07
DDX41Q9UJV9 RNU6-1168P-201ENST00000390831 104 ntBASIC2.11□□□□□ -2.07
DDX41Q9UJV9 MIR934-201ENST00000401241 83 ntBASIC2.11□□□□□ -2.07
DDX41Q9UJV9 AC027119.1-201ENST00000440877 241 ntBASIC2.11□□□□□ -2.07
DDX41Q9UJV9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.11□□□□□ -2.07
DDX41Q9UJV9 RN7SKP19-201ENST00000516016 252 ntBASIC2.11□□□□□ -2.07
DDX41Q9UJV9 AL365222.1-201ENST00000614661 98 ntBASIC2.11□□□□□ -2.07
DDX41Q9UJV9 MIR9-3-201ENST00000385084 90 ntBASIC2.1□□□□□ -2.07
DDX41Q9UJV9 AC021443.1-201ENST00000604478 211 ntBASIC2.1□□□□□ -2.07
DDX41Q9UJV9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.1□□□□□ -2.07
DDX41Q9UJV9 AC021613.1-201ENST00000623880 111 ntBASIC2.1□□□□□ -2.07
DDX41Q9UJV9 RPS29P11-201ENST00000496507 171 ntBASIC2.09□□□□□ -2.07
DDX41Q9UJV9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.09□□□□□ -2.07
DDX41Q9UJV9 MIR4498-201ENST00000577599 66 ntBASIC2.09□□□□□ -2.07
DDX41Q9UJV9 AL359881.1-201ENST00000602916 267 ntBASIC2.09□□□□□ -2.07
DDX41Q9UJV9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.09□□□□□ -2.08
DDX41Q9UJV9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
DDX41Q9UJV9 Y_RNA.291-201ENST00000364886 113 ntBASIC2.08□□□□□ -2.08
DDX41Q9UJV9 Y_RNA.366-201ENST00000365540 102 ntBASIC2.08□□□□□ -2.08
DDX41Q9UJV9 SNORA17.3-201ENST00000391159 129 ntBASIC2.08□□□□□ -2.08
DDX41Q9UJV9 Y_RNA.617-201ENST00000410920 90 ntBASIC2.08□□□□□ -2.08
DDX41Q9UJV9 AC108667.1-201ENST00000428618 249 ntBASIC2.08□□□□□ -2.08
DDX41Q9UJV9 AC245517.4-201ENST00000448601 281 ntBASIC2.08□□□□□ -2.08
DDX41Q9UJV9 RNU7-107P-201ENST00000459121 61 ntBASIC2.08□□□□□ -2.08
DDX41Q9UJV9 AC108729.3-201ENST00000513484 108 ntBASIC2.08□□□□□ -2.08
DDX41Q9UJV9 RNU7-41P-201ENST00000515917 61 ntBASIC2.08□□□□□ -2.08
DDX41Q9UJV9 RNU6-659P-201ENST00000516454 104 ntBASIC2.08□□□□□ -2.08
DDX41Q9UJV9 MIR3683-201ENST00000580847 82 ntBASIC2.08□□□□□ -2.08
DDX41Q9UJV9 AC108081.1-201ENST00000604358 221 ntBASIC2.08□□□□□ -2.08
DDX41Q9UJV9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
DDX41Q9UJV9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
DDX41Q9UJV9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
DDX41Q9UJV9 RNU4-16P-201ENST00000364737 141 ntBASIC2.07□□□□□ -2.08
DDX41Q9UJV9 RNU6-1319P-201ENST00000390855 104 ntBASIC2.07□□□□□ -2.08
DDX41Q9UJV9 RNU6-747P-201ENST00000390928 104 ntBASIC2.07□□□□□ -2.08
DDX41Q9UJV9 RNU6-241P-201ENST00000391148 104 ntBASIC2.07□□□□□ -2.08
DDX41Q9UJV9 RNA5SP136-201ENST00000410906 107 ntBASIC2.07□□□□□ -2.08
DDX41Q9UJV9 RNU6-177P-201ENST00000411257 104 ntBASIC2.07□□□□□ -2.08
DDX41Q9UJV9 RNA5SP445-201ENST00000515889 115 ntBASIC2.07□□□□□ -2.08
DDX41Q9UJV9 RNU6-772P-201ENST00000516042 105 ntBASIC2.07□□□□□ -2.08
DDX41Q9UJV9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.07□□□□□ -2.08
DDX41Q9UJV9 AL020996.3-201ENST00000606617 222 ntBASIC2.07□□□□□ -2.08
DDX41Q9UJV9 AC084768.2-201ENST00000622736 221 ntBASIC2.07□□□□□ -2.08
DDX41Q9UJV9 SNORA1.1-201ENST00000364671 133 ntBASIC2.06□□□□□ -2.08
DDX41Q9UJV9 RNU6-1053P-201ENST00000515930 101 ntBASIC2.06□□□□□ -2.08
DDX41Q9UJV9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.06□□□□□ -2.08
DDX41Q9UJV9 MIR4305-201ENST00000583252 102 ntBASIC2.06□□□□□ -2.08
DDX41Q9UJV9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
DDX41Q9UJV9 Y_RNA.261-201ENST00000364631 102 ntBASIC2.05□□□□□ -2.08
DDX41Q9UJV9 SNORD48-201ENST00000364953 64 ntBASIC2.05□□□□□ -2.08
DDX41Q9UJV9 Y_RNA.346-201ENST00000365385 112 ntBASIC2.05□□□□□ -2.08
DDX41Q9UJV9 AL022718.1-201ENST00000412004 84 ntBASIC2.05□□□□□ -2.08
DDX41Q9UJV9 RNU7-164P-201ENST00000459221 62 ntBASIC2.05□□□□□ -2.08
DDX41Q9UJV9 Y_RNA.712-201ENST00000517011 92 ntBASIC2.05□□□□□ -2.08
DDX41Q9UJV9 MIR3664-201ENST00000579074 99 ntBASIC2.05□□□□□ -2.08
DDX41Q9UJV9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
DDX41Q9UJV9 SNORD58C-201ENST00000365223 64 ntBASIC2.04□□□□□ -2.08
DDX41Q9UJV9 Y_RNA.354-201ENST00000365448 111 ntBASIC2.04□□□□□ -2.08
DDX41Q9UJV9 SNORA22C-201ENST00000384614 134 ntBASIC2.04□□□□□ -2.08
DDX41Q9UJV9 MIR759-201ENST00000390224 91 ntBASIC2.04□□□□□ -2.08
DDX41Q9UJV9 RNU6-913P-201ENST00000390913 95 ntBASIC2.04□□□□□ -2.08
DDX41Q9UJV9 MIR1263-201ENST00000408324 86 ntBASIC2.04□□□□□ -2.08
DDX41Q9UJV9 RPL31P63-201ENST00000422565 375 ntBASIC2.04□□□□□ -2.08
DDX41Q9UJV9 CYP3A52P-201ENST00000563326 91 ntBASIC2.04□□□□□ -2.08
DDX41Q9UJV9 HSPE1P19-201ENST00000603327 295 ntBASIC2.04□□□□□ -2.08
DDX41Q9UJV9 AL096861.1-201ENST00000610899 123 ntBASIC2.04□□□□□ -2.08
DDX41Q9UJV9 U6.95-201ENST00000636931 70 ntBASIC2.04□□□□□ -2.08
DDX41Q9UJV9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms