| SAE1 | Q9UBE0 | AC063976.4-201 | ENST00000421971 | 163 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU1-41P-201 | ENST00000516161 | 162 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU1-48P-201 | ENST00000516400 | 162 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | MIR4419B-201 | ENST00000577260 | 68 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | PI15-201 | ENST00000260113 | 6732 nt | APPRIS P1 TSL 1 (best) BASIC | 1.88 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AL359851.1-201 | ENST00000569460 | 4997 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU6-880P-201 | ENST00000384526 | 107 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | Y_RNA.537-201 | ENST00000384626 | 109 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AL445685.2-201 | ENST00000422551 | 342 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AC079760.1-201 | ENST00000456952 | 202 nt | TSL 3 BASIC | 1.88 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | PDCD5P2-201 | ENST00000507570 | 312 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU7-53P-201 | ENST00000516705 | 60 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | MIR4764-201 | ENST00000580680 | 88 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | NEDD1-204 | ENST00000457368 | 3162 nt | TSL 2 BASIC | 1.88 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | TDRD15-202 | ENST00000622654 | 5805 nt | APPRIS P1 BASIC | 1.88 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU6-1067P-201 | ENST00000384752 | 107 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | MIR520C-201 | ENST00000385005 | 87 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU6-1319P-201 | ENST00000390855 | 104 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU6-747P-201 | ENST00000390928 | 104 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU6-241P-201 | ENST00000391148 | 104 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | SNORA26.6-201 | ENST00000391256 | 115 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU6-177P-201 | ENST00000411257 | 104 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | POLR2J4-204 | ENST00000418424 | 324 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AL512326.2-201 | ENST00000426359 | 151 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU7-73P-201 | ENST00000458743 | 63 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNA5SP233-201 | ENST00000459153 | 113 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | snoU13.26-201 | ENST00000459452 | 105 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU7-43P-201 | ENST00000516554 | 64 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AC007012.1-201 | ENST00000567192 | 175 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | uc_338.20-201 | ENST00000621563 | 178 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | BRCA1-202 | ENST00000354071 | 4497 nt | TSL 1 (best) BASIC | 1.87 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AC131280.1-202 | ENST00000624067 | 4211 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | TBL1XR1-208 | ENST00000430069 | 7948 nt | APPRIS P1 TSL 1 (best) BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | SNORD114-1-201 | ENST00000362705 | 72 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | Y_RNA.213-201 | ENST00000364178 | 111 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU6-153P-201 | ENST00000364422 | 104 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | SNORA51.10-201 | ENST00000384418 | 136 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | Y_RNA.549-201 | ENST00000384657 | 102 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | MIR9-3-201 | ENST00000385084 | 90 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | ATP6V0E1P3-201 | ENST00000420036 | 246 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AC015688.6-201 | ENST00000577737 | 104 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AL020996.3-201 | ENST00000606617 | 222 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | MIR8074-201 | ENST00000615081 | 81 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | HOTAIRM1_4.1-201 | ENST00000617934 | 102 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AC008133.2-201 | ENST00000624540 | 351 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | SLC9C2-201 | ENST00000367714 | 4428 nt | APPRIS P1 TSL 1 (best) BASIC | 1.86 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | SNORA40.18-201 | ENST00000391200 | 128 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AL022718.1-201 | ENST00000412004 | 84 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU6-322P-201 | ENST00000516010 | 103 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU6-1258P-201 | ENST00000516911 | 111 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AC004812.1-201 | ENST00000540773 | 146 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AC103810.8-201 | ENST00000607347 | 118 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | Metazoa_SRP.32-201 | ENST00000622685 | 286 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | Y_RNA.171-201 | ENST00000363760 | 102 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | SNORD48-201 | ENST00000364953 | 64 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AL451046.2-201 | ENST00000403074 | 277 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU2-40P-201 | ENST00000410833 | 196 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | HMGN1P33-201 | ENST00000432945 | 451 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU6-922P-201 | ENST00000516753 | 99 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | DNAJC19P9-201 | ENST00000555084 | 351 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | MIR3152-201 | ENST00000579801 | 74 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | AL035470.1-201 | ENST00000622571 | 220 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | MIR6717-201 | ENST00000622747 | 73 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| SAE1 | Q9UBE0 | RNU6-755P-201 | ENST00000364400 | 103 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | Y_RNA.531-201 | ENST00000384589 | 121 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | SNORD41-201 | ENST00000386967 | 70 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | MIR759-201 | ENST00000390224 | 91 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | snoU13.16-201 | ENST00000459350 | 104 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | RPL23AP42-201 | ENST00000471152 | 471 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | RNU7-41P-201 | ENST00000515917 | 61 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | SNORA22.1-201 | ENST00000362701 | 134 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | RNY4P6-201 | ENST00000363667 | 96 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | Y_RNA.281-201 | ENST00000364774 | 94 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | SNORD12C-201 | ENST00000386307 | 89 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | AC005908.1-201 | ENST00000468701 | 347 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | MIR8055-201 | ENST00000610739 | 97 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | AL627230.6-201 | ENST00000611129 | 280 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | MIR6841-201 | ENST00000637129 | 72 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | KIAA1551-201 | ENST00000312561 | 6230 nt | APPRIS P1 TSL 1 (best) BASIC | 1.82 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | Y_RNA.362-201 | ENST00000365518 | 110 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | MIR583-201 | ENST00000384846 | 75 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | HMGN2P23-201 | ENST00000456759 | 269 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | RNU7-113P-201 | ENST00000459273 | 62 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | snoU13.15-201 | ENST00000459407 | 104 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | MIR4679-2-201 | ENST00000578358 | 77 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | AC104984.5-201 | ENST00000586878 | 94 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | AL513534.2-201 | ENST00000603836 | 250 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | MIR8063-201 | ENST00000621930 | 81 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | FSD1L-201 | ENST00000374707 | 7062 nt | TSL 1 (best) BASIC | 1.81 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | MBNL3-212 | ENST00000538204 | 11294 nt | TSL 1 (best) BASIC | 1.8 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | FSIP2-206 | ENST00000611759 | 3882 nt | APPRIS ALT2 TSL 5 BASIC | 1.8 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | SNORA63.5-201 | ENST00000363548 | 123 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | Y_RNA.344-201 | ENST00000365381 | 112 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | Y_RNA.430-201 | ENST00000384081 | 110 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | MIR504-201 | ENST00000385065 | 83 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | MIR676-201 | ENST00000390702 | 67 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | RNA5SP261-201 | ENST00000410536 | 106 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | RPS23P4-201 | ENST00000487908 | 423 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | SNORD111.1-201 | ENST00000516421 | 86 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| SAE1 | Q9UBE0 | RNU7-6P-201 | ENST00000516845 | 62 nt | BASIC | 1.8 | □□□□□ -2.12 | | |