Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL603914.1-201ENST00000401964 204 ntBASIC1.69□□□□□ -2.14
CCM2LQ9NUG4 RNU7-73P-201ENST00000458743 63 ntBASIC1.69□□□□□ -2.14
CCM2LQ9NUG4 RNU2-11P-201ENST00000459191 187 ntBASIC1.69□□□□□ -2.14
CCM2LQ9NUG4 snoU13.16-201ENST00000459350 104 ntBASIC1.69□□□□□ -2.14
CCM2LQ9NUG4 Y_RNA.690-201ENST00000516603 95 ntBASIC1.69□□□□□ -2.14
CCM2LQ9NUG4 RNU2-60P-201ENST00000517290 128 ntBASIC1.69□□□□□ -2.14
CCM2LQ9NUG4 AP001485.1-201ENST00000604799 199 ntBASIC1.69□□□□□ -2.14
CCM2LQ9NUG4 AL359821.1-201ENST00000605519 182 ntBASIC1.69□□□□□ -2.14
CCM2LQ9NUG4 AL596211.1-201ENST00000569873 2277 ntBASIC1.68□□□□□ -2.14
CCM2LQ9NUG4 MIR489-201ENST00000384923 84 ntBASIC1.68□□□□□ -2.14
CCM2LQ9NUG4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.68□□□□□ -2.14
CCM2LQ9NUG4 SNORA40-201ENST00000388090 126 ntBASIC1.68□□□□□ -2.14
CCM2LQ9NUG4 AL392103.1-201ENST00000447000 198 ntBASIC1.68□□□□□ -2.14
CCM2LQ9NUG4 RN7SKP88-201ENST00000516847 250 ntBASIC1.68□□□□□ -2.14
CCM2LQ9NUG4 RNU6-958P-201ENST00000516995 106 ntBASIC1.68□□□□□ -2.14
CCM2LQ9NUG4 U7.2-201ENST00000607576 63 ntBASIC1.68□□□□□ -2.14
CCM2LQ9NUG4 7SK.8-201ENST00000612110 250 ntBASIC1.68□□□□□ -2.14
CCM2LQ9NUG4 7SK.11-201ENST00000615477 250 ntBASIC1.68□□□□□ -2.14
CCM2LQ9NUG4 7SK.13-201ENST00000622040 250 ntBASIC1.68□□□□□ -2.14
CCM2LQ9NUG4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
CCM2LQ9NUG4 RNU6-704P-201ENST00000364162 103 ntBASIC1.67□□□□□ -2.14
CCM2LQ9NUG4 MIR518E-201ENST00000385252 88 ntBASIC1.67□□□□□ -2.14
CCM2LQ9NUG4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.67□□□□□ -2.14
CCM2LQ9NUG4 Y_RNA.686-201ENST00000516548 134 ntBASIC1.67□□□□□ -2.14
CCM2LQ9NUG4 Y_RNA.692-201ENST00000516627 105 ntBASIC1.67□□□□□ -2.14
CCM2LQ9NUG4 RNU6-165P-201ENST00000517170 99 ntBASIC1.67□□□□□ -2.14
CCM2LQ9NUG4 Y_RNA.757-201ENST00000578934 114 ntBASIC1.67□□□□□ -2.14
CCM2LQ9NUG4 MIR3192-201ENST00000584920 77 ntBASIC1.67□□□□□ -2.14
CCM2LQ9NUG4 AC011603.4-201ENST00000611325 277 ntBASIC1.67□□□□□ -2.14
CCM2LQ9NUG4 Y_RNA.116-201ENST00000363292 103 ntBASIC1.66□□□□□ -2.14
CCM2LQ9NUG4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.66□□□□□ -2.14
CCM2LQ9NUG4 AC003989.2-201ENST00000440224 169 ntBASIC1.66□□□□□ -2.14
CCM2LQ9NUG4 TMSB4XP3-201ENST00000445144 114 ntBASIC1.66□□□□□ -2.14
CCM2LQ9NUG4 RNU6-113P-201ENST00000516653 101 ntBASIC1.66□□□□□ -2.14
CCM2LQ9NUG4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.66□□□□□ -2.14
CCM2LQ9NUG4 TUG1_4.1-201ENST00000619464 181 ntBASIC1.66□□□□□ -2.14
CCM2LQ9NUG4 AC091895.1-201ENST00000624494 256 ntBASIC1.66□□□□□ -2.14
CCM2LQ9NUG4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
CCM2LQ9NUG4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CCM2LQ9NUG4 RNY1P6-201ENST00000384193 109 ntBASIC1.65□□□□□ -2.15
CCM2LQ9NUG4 RNU4-62P-201ENST00000410125 130 ntBASIC1.65□□□□□ -2.15
CCM2LQ9NUG4 RNA5SP261-201ENST00000410536 106 ntBASIC1.65□□□□□ -2.15
CCM2LQ9NUG4 AP1B1P2-201ENST00000416196 106 ntBASIC1.65□□□□□ -2.15
CCM2LQ9NUG4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.65□□□□□ -2.15
CCM2LQ9NUG4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CCM2LQ9NUG4 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
CCM2LQ9NUG4 RNU6-257P-201ENST00000410238 98 ntBASIC1.64□□□□□ -2.15
CCM2LQ9NUG4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.64□□□□□ -2.15
CCM2LQ9NUG4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.64□□□□□ -2.15
CCM2LQ9NUG4 MIR3683-201ENST00000580847 82 ntBASIC1.64□□□□□ -2.15
CCM2LQ9NUG4 AL022345.2-201ENST00000606307 135 ntBASIC1.64□□□□□ -2.15
CCM2LQ9NUG4 MIR8081-201ENST00000611533 95 ntBASIC1.64□□□□□ -2.15
CCM2LQ9NUG4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CCM2LQ9NUG4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CCM2LQ9NUG4 MTND4LP9-201ENST00000427694 174 ntBASIC1.63□□□□□ -2.15
CCM2LQ9NUG4 AC009474.2-201ENST00000451383 136 ntBASIC1.63□□□□□ -2.15
CCM2LQ9NUG4 AL133373.1-201ENST00000497098 94 ntBASIC1.63□□□□□ -2.15
CCM2LQ9NUG4 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
CCM2LQ9NUG4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
CCM2LQ9NUG4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.62□□□□□ -2.15
CCM2LQ9NUG4 RNU6-913P-201ENST00000390913 95 ntBASIC1.62□□□□□ -2.15
CCM2LQ9NUG4 snoU13.18-201ENST00000459483 104 ntBASIC1.62□□□□□ -2.15
CCM2LQ9NUG4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.62□□□□□ -2.15
CCM2LQ9NUG4 RPS29P11-201ENST00000496507 171 ntBASIC1.62□□□□□ -2.15
CCM2LQ9NUG4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.62□□□□□ -2.15
CCM2LQ9NUG4 RNU5E-3P-201ENST00000515913 68 ntBASIC1.62□□□□□ -2.15
CCM2LQ9NUG4 CYP3A52P-201ENST00000563326 91 ntBASIC1.62□□□□□ -2.15
CCM2LQ9NUG4 MIR3910-1-201ENST00000580936 111 ntBASIC1.62□□□□□ -2.15
CCM2LQ9NUG4 AL020996.3-201ENST00000606617 222 ntBASIC1.62□□□□□ -2.15
CCM2LQ9NUG4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.62□□□□□ -2.15
CCM2LQ9NUG4 RNU6-508P-201ENST00000363231 103 ntBASIC1.61□□□□□ -2.15
CCM2LQ9NUG4 RNU6-309P-201ENST00000364573 106 ntBASIC1.61□□□□□ -2.15
CCM2LQ9NUG4 RNU6-690P-201ENST00000365242 106 ntBASIC1.61□□□□□ -2.15
CCM2LQ9NUG4 MIR539-201ENST00000365690 78 ntBASIC1.61□□□□□ -2.15
CCM2LQ9NUG4 Y_RNA.586-201ENST00000391146 98 ntBASIC1.61□□□□□ -2.15
CCM2LQ9NUG4 MIR548AO-201ENST00000579992 96 ntBASIC1.61□□□□□ -2.15
CCM2LQ9NUG4 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
CCM2LQ9NUG4 MIR8065-201ENST00000620577 100 ntBASIC1.61□□□□□ -2.15
CCM2LQ9NUG4 MIR103A2-201ENST00000362154 78 ntBASIC1.6□□□□□ -2.15
CCM2LQ9NUG4 SNORA1.1-201ENST00000364671 133 ntBASIC1.6□□□□□ -2.15
CCM2LQ9NUG4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.6□□□□□ -2.15
CCM2LQ9NUG4 AC245047.7-201ENST00000440265 293 ntBASIC1.6□□□□□ -2.15
CCM2LQ9NUG4 Y_RNA.651-201ENST00000459380 103 ntBASIC1.6□□□□□ -2.15
CCM2LQ9NUG4 SNORA31.4-201ENST00000516049 129 ntBASIC1.6□□□□□ -2.15
CCM2LQ9NUG4 RNU6-970P-201ENST00000516312 107 ntBASIC1.6□□□□□ -2.15
CCM2LQ9NUG4 MIR3152-201ENST00000579801 74 ntBASIC1.6□□□□□ -2.15
CCM2LQ9NUG4 MIR4303-201ENST00000581299 66 ntBASIC1.6□□□□□ -2.15
CCM2LQ9NUG4 AC021613.1-201ENST00000623880 111 ntBASIC1.6□□□□□ -2.15
CCM2LQ9NUG4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CCM2LQ9NUG4 RNU6-349P-201ENST00000362402 107 ntBASIC1.59□□□□□ -2.15
CCM2LQ9NUG4 SNORA25.3-201ENST00000363205 127 ntBASIC1.59□□□□□ -2.15
CCM2LQ9NUG4 Y_RNA.294-201ENST00000364916 102 ntBASIC1.59□□□□□ -2.15
CCM2LQ9NUG4 MIR9-3-201ENST00000385084 90 ntBASIC1.59□□□□□ -2.15
CCM2LQ9NUG4 SNORA31.2-201ENST00000516019 134 ntBASIC1.59□□□□□ -2.15
CCM2LQ9NUG4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.59□□□□□ -2.15
CCM2LQ9NUG4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.59□□□□□ -2.15
CCM2LQ9NUG4 MIR3121-201ENST00000579680 77 ntBASIC1.59□□□□□ -2.15
CCM2LQ9NUG4 RNA5SP264-201ENST00000363115 107 ntBASIC1.58□□□□□ -2.16
CCM2LQ9NUG4 RNU6-647P-201ENST00000364243 107 ntBASIC1.58□□□□□ -2.16
CCM2LQ9NUG4 RNU4-16P-201ENST00000364737 141 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms