Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 POLR2J4-204ENST00000418424 324 ntBASIC2.22□□□□□ -2.05
RNF38Q9H0F5 MTATP8P2-201ENST00000435212 202 ntBASIC2.22□□□□□ -2.05
RNF38Q9H0F5 AC107297.1-201ENST00000459991 176 ntBASIC2.22□□□□□ -2.05
RNF38Q9H0F5 RNA5SP481-201ENST00000516814 122 ntBASIC2.22□□□□□ -2.05
RNF38Q9H0F5 SNORA31.17-201ENST00000516953 127 ntBASIC2.22□□□□□ -2.05
RNF38Q9H0F5 MIR4299-201ENST00000577899 72 ntBASIC2.22□□□□□ -2.05
RNF38Q9H0F5 MIR6132-201ENST00000622083 109 ntBASIC2.22□□□□□ -2.05
RNF38Q9H0F5 RNY3P2-201ENST00000362918 102 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 Y_RNA.78-201ENST00000362970 110 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 Y_RNA.107-201ENST00000363190 121 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 Y_RNA.155-201ENST00000363632 101 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 Y_RNA.220-201ENST00000364244 109 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 Y_RNA.388-201ENST00000383919 113 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 MIR452-201ENST00000385020 85 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 SNORA26.2-201ENST00000390922 122 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 RNY4P29-201ENST00000410801 97 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 HMGN2P38-201ENST00000423806 265 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 RNU7-67P-201ENST00000459003 62 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 RNU7-113P-201ENST00000459273 62 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 AC090255.1-201ENST00000495779 349 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 RNU6-1258P-201ENST00000516911 111 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 DEFB131E-201ENST00000532329 154 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 MIR3618-201ENST00000580330 88 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 AC021506.2-201ENST00000612354 169 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 MALAT1.1-201ENST00000618249 95 ntBASIC2.21□□□□□ -2.06
RNF38Q9H0F5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.21□□□□□ -2.06
RNF38Q9H0F5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RNF38Q9H0F5 RNU4-36P-201ENST00000364294 144 ntBASIC2.2□□□□□ -2.06
RNF38Q9H0F5 MIR136-201ENST00000385207 82 ntBASIC2.2□□□□□ -2.06
RNF38Q9H0F5 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
RNF38Q9H0F5 RNU6-1190P-201ENST00000410811 104 ntBASIC2.2□□□□□ -2.06
RNF38Q9H0F5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.2□□□□□ -2.06
RNF38Q9H0F5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RNF38Q9H0F5 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.2□□□□□ -2.06
RNF38Q9H0F5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
RNF38Q9H0F5 MIR4709-201ENST00000577272 72 ntBASIC2.2□□□□□ -2.06
RNF38Q9H0F5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.2□□□□□ -2.06
RNF38Q9H0F5 SNORA1.2-201ENST00000365189 134 ntBASIC2.19□□□□□ -2.06
RNF38Q9H0F5 Y_RNA.507-201ENST00000384500 99 ntBASIC2.19□□□□□ -2.06
RNF38Q9H0F5 MIR526A1-201ENST00000384897 85 ntBASIC2.19□□□□□ -2.06
RNF38Q9H0F5 SNORD28B-201ENST00000390993 75 ntBASIC2.19□□□□□ -2.06
RNF38Q9H0F5 AC024614.2-201ENST00000577584 372 ntBASIC2.19□□□□□ -2.06
RNF38Q9H0F5 MIR4791-201ENST00000607666 84 ntBASIC2.19□□□□□ -2.06
RNF38Q9H0F5 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
RNF38Q9H0F5 RNU6-661P-201ENST00000362409 107 ntBASIC2.18□□□□□ -2.06
RNF38Q9H0F5 RNA5SP432-201ENST00000362480 116 ntBASIC2.18□□□□□ -2.06
RNF38Q9H0F5 Y_RNA.470-201ENST00000384307 117 ntBASIC2.18□□□□□ -2.06
RNF38Q9H0F5 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
RNF38Q9H0F5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.18□□□□□ -2.06
RNF38Q9H0F5 RPS27P21-201ENST00000486977 252 ntBASIC2.18□□□□□ -2.06
RNF38Q9H0F5 SCARNA23-201ENST00000516060 130 ntBASIC2.18□□□□□ -2.06
RNF38Q9H0F5 RNU6-844P-201ENST00000517175 102 ntBASIC2.18□□□□□ -2.06
RNF38Q9H0F5 AL442128.1-201ENST00000615151 90 ntBASIC2.18□□□□□ -2.06
RNF38Q9H0F5 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.18□□□□□ -2.06
RNF38Q9H0F5 SNORD3E-202ENST00000627253 216 ntBASIC2.18□□□□□ -2.06
RNF38Q9H0F5 AL442644.1-201ENST00000454390 3105 ntBASIC2.18□□□□□ -2.06
RNF38Q9H0F5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RNF38Q9H0F5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.17□□□□□ -2.06
RNF38Q9H0F5 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 SNORA22.1-201ENST00000362701 134 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 RNU4-67P-201ENST00000364569 141 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 Y_RNA.342-201ENST00000365352 113 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 SNORA70.7-201ENST00000384159 133 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 MIR605-201ENST00000385078 83 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 SNORA7.5-201ENST00000410672 110 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 RPS29P29-201ENST00000456396 171 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 RNA5SP233-201ENST00000459153 113 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 snoU13.27-201ENST00000459278 104 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 SNORD123-201ENST00000459473 70 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 RNA5SP33-201ENST00000516687 98 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 MIR548AR-201ENST00000582191 57 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 MIR4713-201ENST00000582691 75 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 MIR5002-201ENST00000584713 97 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 AC062037.1-201ENST00000605302 128 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 AL627230.6-201ENST00000611129 280 ntBASIC2.17□□□□□ -2.06
RNF38Q9H0F5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
RNF38Q9H0F5 Y_RNA.93-201ENST00000363066 109 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 SNORD115-19-201ENST00000363098 82 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 SNORD115-18-201ENST00000363293 82 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU6-1099P-201ENST00000363533 107 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 SNORD115-17-201ENST00000364612 82 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 SNORA32-201ENST00000384072 121 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU6-409P-201ENST00000384114 104 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU6-616P-201ENST00000384353 107 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU6-1319P-201ENST00000390855 104 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU6-913P-201ENST00000390913 95 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU6-747P-201ENST00000390928 104 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU6-360P-201ENST00000390944 104 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU6-241P-201ENST00000391148 104 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU4-69P-201ENST00000410677 143 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU6-733P-201ENST00000410759 104 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU6-177P-201ENST00000411257 104 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 PGBD4P5-201ENST00000445958 426 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 AC099513.1-201ENST00000490423 301 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU6-795P-201ENST00000516323 103 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU7-53P-201ENST00000516705 60 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 RNU6-158P-201ENST00000517104 100 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 AC022254.1-201ENST00000567857 235 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 MIR548AE2-201ENST00000583456 67 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms