Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.42□□□□□ -2.18
TRIM2Q9C040 AL596211.1-201ENST00000569873 2277 ntBASIC1.41□□□□□ -2.18
TRIM2Q9C040 AC010332.2-201ENST00000613083 1904 ntBASIC1.41□□□□□ -2.18
TRIM2Q9C040 Y_RNA.294-201ENST00000364916 102 ntBASIC1.41□□□□□ -2.18
TRIM2Q9C040 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
TRIM2Q9C040 RNU4-62P-201ENST00000410125 130 ntBASIC1.41□□□□□ -2.18
TRIM2Q9C040 MTND4LP9-201ENST00000427694 174 ntBASIC1.41□□□□□ -2.18
TRIM2Q9C040 AC009474.2-201ENST00000451383 136 ntBASIC1.41□□□□□ -2.18
TRIM2Q9C040 RNU7-96P-201ENST00000459535 64 ntBASIC1.41□□□□□ -2.18
TRIM2Q9C040 AC107297.1-201ENST00000459991 176 ntBASIC1.41□□□□□ -2.18
TRIM2Q9C040 MIR548AO-201ENST00000579992 96 ntBASIC1.41□□□□□ -2.18
TRIM2Q9C040 Y_RNA.120-201ENST00000363304 110 ntBASIC1.4□□□□□ -2.19
TRIM2Q9C040 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
TRIM2Q9C040 MIR1302-7-201ENST00000408841 72 ntBASIC1.4□□□□□ -2.19
TRIM2Q9C040 AP1B1P2-201ENST00000416196 106 ntBASIC1.4□□□□□ -2.19
TRIM2Q9C040 AL035398.1-201ENST00000430869 322 ntBASIC1.4□□□□□ -2.19
TRIM2Q9C040 HMGN1P33-201ENST00000432945 451 ntBASIC1.4□□□□□ -2.19
TRIM2Q9C040 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.4□□□□□ -2.19
TRIM2Q9C040 RPL30P7-201ENST00000479312 323 ntBASIC1.4□□□□□ -2.19
TRIM2Q9C040 Y_RNA.690-201ENST00000516603 95 ntBASIC1.4□□□□□ -2.19
TRIM2Q9C040 RN7SKP88-201ENST00000516847 250 ntBASIC1.4□□□□□ -2.19
TRIM2Q9C040 7SK.8-201ENST00000612110 250 ntBASIC1.4□□□□□ -2.19
TRIM2Q9C040 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TRIM2Q9C040 7SK.11-201ENST00000615477 250 ntBASIC1.4□□□□□ -2.19
TRIM2Q9C040 7SK.13-201ENST00000622040 250 ntBASIC1.4□□□□□ -2.19
TRIM2Q9C040 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
TRIM2Q9C040 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
TRIM2Q9C040 Y_RNA.343-201ENST00000365354 112 ntBASIC1.39□□□□□ -2.19
TRIM2Q9C040 MIR1304-201ENST00000408243 91 ntBASIC1.39□□□□□ -2.19
TRIM2Q9C040 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.39□□□□□ -2.19
TRIM2Q9C040 AC090844.1-201ENST00000422019 156 ntBASIC1.39□□□□□ -2.19
TRIM2Q9C040 AC048334.1-201ENST00000477975 159 ntBASIC1.39□□□□□ -2.19
TRIM2Q9C040 Y_RNA.676-201ENST00000516393 96 ntBASIC1.39□□□□□ -2.19
TRIM2Q9C040 SNORD53B-201ENST00000577887 78 ntBASIC1.39□□□□□ -2.19
TRIM2Q9C040 AL121890.5-201ENST00000620848 304 ntBASIC1.39□□□□□ -2.19
TRIM2Q9C040 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRIM2Q9C040 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRIM2Q9C040 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRIM2Q9C040 RNU4-16P-201ENST00000364737 141 ntBASIC1.38□□□□□ -2.19
TRIM2Q9C040 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
TRIM2Q9C040 RNU6-1053P-201ENST00000515930 101 ntBASIC1.38□□□□□ -2.19
TRIM2Q9C040 AP003716.2-201ENST00000528260 108 ntBASIC1.38□□□□□ -2.19
TRIM2Q9C040 AP001328.1-201ENST00000528550 176 ntBASIC1.38□□□□□ -2.19
TRIM2Q9C040 AL022345.2-201ENST00000606307 135 ntBASIC1.38□□□□□ -2.19
TRIM2Q9C040 AP001340.1-201ENST00000624405 217 ntBASIC1.38□□□□□ -2.19
TRIM2Q9C040 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.37□□□□□ -2.19
TRIM2Q9C040 RNU6-349P-201ENST00000362402 107 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 RNU6-704P-201ENST00000364162 103 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 RNU1-133P-201ENST00000364867 167 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 MIR613-201ENST00000385248 95 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 MIR320A-201ENST00000385302 82 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 Y_RNA.586-201ENST00000391146 98 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 AL603914.1-201ENST00000401964 204 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 MIR1185-1-201ENST00000408598 86 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 RPL39P39-201ENST00000455840 151 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 RNU7-73P-201ENST00000458743 63 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 RNU7-80P-201ENST00000459562 61 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 RNU5E-3P-201ENST00000515913 68 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 DNAJC19P9-201ENST00000555084 351 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 AC108081.1-201ENST00000604358 221 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 AL020996.3-201ENST00000606617 222 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 AL512598.1-201ENST00000610158 273 ntBASIC1.37□□□□□ -2.19
TRIM2Q9C040 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TRIM2Q9C040 Y_RNA.4-201ENST00000362333 112 ntBASIC1.36□□□□□ -2.19
TRIM2Q9C040 RNA5SP48-201ENST00000363969 126 ntBASIC1.36□□□□□ -2.19
TRIM2Q9C040 Y_RNA.363-201ENST00000365529 113 ntBASIC1.36□□□□□ -2.19
TRIM2Q9C040 SNORA70.7-201ENST00000384159 133 ntBASIC1.36□□□□□ -2.19
TRIM2Q9C040 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
TRIM2Q9C040 SNORA26.6-201ENST00000391256 115 ntBASIC1.36□□□□□ -2.19
TRIM2Q9C040 MIR1323-201ENST00000408090 73 ntBASIC1.36□□□□□ -2.19
TRIM2Q9C040 RNU7-95P-201ENST00000459222 64 ntBASIC1.36□□□□□ -2.19
TRIM2Q9C040 snoU13.16-201ENST00000459350 104 ntBASIC1.36□□□□□ -2.19
TRIM2Q9C040 RNU7-70P-201ENST00000516941 66 ntBASIC1.36□□□□□ -2.19
TRIM2Q9C040 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.36□□□□□ -2.19
TRIM2Q9C040 AL645939.4-201ENST00000604495 135 ntBASIC1.36□□□□□ -2.19
TRIM2Q9C040 MIR302B-201ENST00000362188 73 ntBASIC1.35□□□□□ -2.19
TRIM2Q9C040 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
TRIM2Q9C040 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
TRIM2Q9C040 SNORD50.2-201ENST00000365465 70 ntBASIC1.35□□□□□ -2.19
TRIM2Q9C040 SNORD18B-201ENST00000365659 72 ntBASIC1.35□□□□□ -2.19
TRIM2Q9C040 RNU6-1067P-201ENST00000384752 107 ntBASIC1.35□□□□□ -2.19
TRIM2Q9C040 SNORA31.2-201ENST00000516019 134 ntBASIC1.35□□□□□ -2.19
TRIM2Q9C040 RNU7-53P-201ENST00000516705 60 ntBASIC1.35□□□□□ -2.19
TRIM2Q9C040 MIR3121-201ENST00000579680 77 ntBASIC1.35□□□□□ -2.19
TRIM2Q9C040 MIR8055-201ENST00000610739 97 ntBASIC1.35□□□□□ -2.19
TRIM2Q9C040 Y_RNA.454-201ENST00000384224 113 ntBASIC1.34□□□□□ -2.19
TRIM2Q9C040 SNORA40-201ENST00000388090 126 ntBASIC1.34□□□□□ -2.19
TRIM2Q9C040 RNU6-1054P-201ENST00000411293 104 ntBASIC1.34□□□□□ -2.19
TRIM2Q9C040 AC245047.7-201ENST00000440265 293 ntBASIC1.34□□□□□ -2.19
TRIM2Q9C040 AL133373.1-201ENST00000497098 94 ntBASIC1.34□□□□□ -2.19
TRIM2Q9C040 RNU6-240P-201ENST00000516098 97 ntBASIC1.34□□□□□ -2.19
TRIM2Q9C040 RNU6-971P-201ENST00000516920 106 ntBASIC1.34□□□□□ -2.19
TRIM2Q9C040 SNORA31.24-201ENST00000517232 57 ntBASIC1.34□□□□□ -2.19
TRIM2Q9C040 PRELID3BP2-201ENST00000605362 201 ntBASIC1.34□□□□□ -2.19
TRIM2Q9C040 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.34□□□□□ -2.19
TRIM2Q9C040 AC091895.1-201ENST00000624494 256 ntBASIC1.34□□□□□ -2.19
TRIM2Q9C040 RNA5SP264-201ENST00000363115 107 ntBASIC1.33□□□□□ -2.2
TRIM2Q9C040 Y_RNA.164-201ENST00000363709 102 ntBASIC1.33□□□□□ -2.2
TRIM2Q9C040 Y_RNA.280-201ENST00000364765 112 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms