Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SALL3Q9BXA9 Y_RNA.265-201ENST00000364677 108 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 RNU6-1014P-201ENST00000383940 103 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 MT-TI-201ENST00000387365 69 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 RNA5SP136-201ENST00000410906 107 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 RNA5SP450-201ENST00000411206 102 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.02□□□□□ -2.09
SALL3Q9BXA9 RPL23AP6-201ENST00000446637 472 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 RNU6-857P-201ENST00000515893 110 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 RNU6-1149P-201ENST00000516810 97 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 AC084364.2-201ENST00000546924 395 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 AL359821.1-201ENST00000605519 182 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 AC025166.1-201ENST00000612411 163 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 MIR8054-201ENST00000620877 86 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 AC027279.3-201ENST00000625055 122 ntBASIC2.02□□□□□ -2.09
SALL3Q9BXA9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SALL3Q9BXA9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SALL3Q9BXA9 SNORD115-28-201ENST00000363931 81 ntBASIC2.01□□□□□ -2.09
SALL3Q9BXA9 RNU6-497P-201ENST00000365316 104 ntBASIC2.01□□□□□ -2.09
SALL3Q9BXA9 RNU6-1189P-201ENST00000383958 107 ntBASIC2.01□□□□□ -2.09
SALL3Q9BXA9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SALL3Q9BXA9 MIR548O-201ENST00000408583 114 ntBASIC2.01□□□□□ -2.09
SALL3Q9BXA9 MIR1283-2-201ENST00000408621 87 ntBASIC2.01□□□□□ -2.09
SALL3Q9BXA9 AL606517.2-201ENST00000442855 241 ntBASIC2.01□□□□□ -2.09
SALL3Q9BXA9 AC087499.4-201ENST00000448505 178 ntBASIC2.01□□□□□ -2.09
SALL3Q9BXA9 RPL39P34-201ENST00000477141 156 ntBASIC2.01□□□□□ -2.09
SALL3Q9BXA9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.01□□□□□ -2.09
SALL3Q9BXA9 RNU6-1018P-201ENST00000516577 106 ntBASIC2.01□□□□□ -2.09
SALL3Q9BXA9 AC069114.2-201ENST00000604699 304 ntBASIC2.01□□□□□ -2.09
SALL3Q9BXA9 AL627230.6-201ENST00000611129 280 ntBASIC2.01□□□□□ -2.09
SALL3Q9BXA9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2□□□□□ -2.09
SALL3Q9BXA9 Y_RNA.290-201ENST00000364879 114 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 Y_RNA.323-201ENST00000365157 109 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 RNU6-950P-201ENST00000384651 107 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 Y_RNA.547-201ENST00000384654 119 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 MIR889-201ENST00000401280 79 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 PGBD4P5-201ENST00000445958 426 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 RNU6-893P-201ENST00000458841 100 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2□□□□□ -2.09
SALL3Q9BXA9 AC007012.1-201ENST00000567192 175 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 AC012493.3-201ENST00000604494 112 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 SNORD115-40-201ENST00000606510 82 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 RNU6-94P-201ENST00000607728 107 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 AL442644.1-201ENST00000454390 3105 ntBASIC2□□□□□ -2.09
SALL3Q9BXA9 Y_RNA.37-201ENST00000362606 108 ntBASIC1.99□□□□□ -2.09
SALL3Q9BXA9 RNA5SP109-201ENST00000391010 116 ntBASIC1.99□□□□□ -2.09
SALL3Q9BXA9 RNU11-3P-201ENST00000391111 133 ntBASIC1.99□□□□□ -2.09
SALL3Q9BXA9 RN7SKP200-201ENST00000410564 320 ntBASIC1.99□□□□□ -2.09
SALL3Q9BXA9 RPL39P39-201ENST00000455840 151 ntBASIC1.99□□□□□ -2.09
SALL3Q9BXA9 RNU6-830P-201ENST00000516353 107 ntBASIC1.99□□□□□ -2.09
SALL3Q9BXA9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SALL3Q9BXA9 Y_RNA.224-201ENST00000364308 111 ntBASIC1.98□□□□□ -2.09
SALL3Q9BXA9 SNORA63D-201ENST00000364359 132 ntBASIC1.98□□□□□ -2.09
SALL3Q9BXA9 RNU6-1276P-201ENST00000365372 104 ntBASIC1.98□□□□□ -2.09
SALL3Q9BXA9 RNU6-979P-201ENST00000383896 107 ntBASIC1.98□□□□□ -2.09
SALL3Q9BXA9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SALL3Q9BXA9 RNA5SP465-201ENST00000391195 109 ntBASIC1.98□□□□□ -2.09
SALL3Q9BXA9 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
SALL3Q9BXA9 RPS3AP1-201ENST00000413190 320 ntBASIC1.98□□□□□ -2.09
SALL3Q9BXA9 RNU7-25P-201ENST00000516544 62 ntBASIC1.98□□□□□ -2.09
SALL3Q9BXA9 RNU6-267P-201ENST00000516714 103 ntBASIC1.98□□□□□ -2.09
SALL3Q9BXA9 MIR4299-201ENST00000577899 72 ntBASIC1.98□□□□□ -2.09
SALL3Q9BXA9 MIR376A2-201ENST00000636782 80 ntBASIC1.98□□□□□ -2.09
SALL3Q9BXA9 MIRLET7C-201ENST00000362160 84 ntBASIC1.97□□□□□ -2.09
SALL3Q9BXA9 SNORA2.2-201ENST00000365473 135 ntBASIC1.97□□□□□ -2.09
SALL3Q9BXA9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
SALL3Q9BXA9 BX510359.4-201ENST00000423750 193 ntBASIC1.97□□□□□ -2.09
SALL3Q9BXA9 RNU6-904P-201ENST00000516206 101 ntBASIC1.97□□□□□ -2.09
SALL3Q9BXA9 SNORA31.10-201ENST00000516482 106 ntBASIC1.97□□□□□ -2.09
SALL3Q9BXA9 AL773524.1-201ENST00000614065 229 ntBASIC1.97□□□□□ -2.09
SALL3Q9BXA9 AL137067.1-201ENST00000615933 120 ntBASIC1.97□□□□□ -2.09
SALL3Q9BXA9 MIR3202-2-201ENST00000635980 79 ntBASIC1.97□□□□□ -2.09
SALL3Q9BXA9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
SALL3Q9BXA9 Y_RNA.220-201ENST00000364244 109 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 RNU6-776P-201ENST00000364403 104 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 RNU6-1022P-201ENST00000365049 104 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 RNU6-1134P-201ENST00000365156 101 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 Y_RNA.440-201ENST00000384120 114 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 AL034345.1-201ENST00000407768 123 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 MIR1263-201ENST00000408324 86 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 RNU6-938P-201ENST00000411285 103 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 RNU7-80P-201ENST00000459562 61 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 AC107297.1-201ENST00000459991 176 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 COX6CP6-201ENST00000490840 228 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 RNU6-158P-201ENST00000517104 100 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 MIR4666B-201ENST00000578142 81 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 MIR548Z-201ENST00000584743 97 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 AC245060.5-201ENST00000610778 3293 ntBASIC1.96□□□□□ -2.1
SALL3Q9BXA9 RNU6-833P-201ENST00000363486 107 ntBASIC1.95□□□□□ -2.1
SALL3Q9BXA9 SNORA63.5-201ENST00000363548 123 ntBASIC1.95□□□□□ -2.1
SALL3Q9BXA9 SNORD38C-201ENST00000384381 69 ntBASIC1.95□□□□□ -2.1
SALL3Q9BXA9 Y_RNA.528-201ENST00000384575 108 ntBASIC1.95□□□□□ -2.1
SALL3Q9BXA9 AC114811.1-201ENST00000507207 168 ntBASIC1.95□□□□□ -2.1
SALL3Q9BXA9 MIR4778-201ENST00000577635 80 ntBASIC1.95□□□□□ -2.1
SALL3Q9BXA9 MIR5094-201ENST00000578766 85 ntBASIC1.95□□□□□ -2.1
SALL3Q9BXA9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SALL3Q9BXA9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SALL3Q9BXA9 RNU6-349P-201ENST00000362402 107 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 225.3 ms