Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 MIR6717-201ENST00000622747 73 ntBASIC1.13□□□□□ -2.23
LITAFQ99732 RNA5SP48-201ENST00000363969 126 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 Y_RNA.528-201ENST00000384575 108 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 RNU6-997P-201ENST00000384725 107 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 MIR128-1-201ENST00000384921 82 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 MIR934-201ENST00000401241 83 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 RNU6-735P-201ENST00000410612 107 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 RNU4-53P-201ENST00000410828 140 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 POLR2J4-204ENST00000418424 324 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 RPS27P16-201ENST00000425758 201 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 RPL39P39-201ENST00000455840 151 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 RPL30P7-201ENST00000479312 323 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 RNU7-123P-201ENST00000515911 60 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 AL512310.8-201ENST00000550183 120 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 MIR4422-201ENST00000581938 83 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 SCARNA15.3-201ENST00000626315 122 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.12□□□□□ -2.23
LITAFQ99732 U6.95-201ENST00000636931 70 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 MTND5P18-201ENST00000445624 1801 ntBASIC1.12□□□□□ -2.23
LITAFQ99732 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LITAFQ99732 SNORA5B-201ENST00000363786 132 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 SNORA1.1-201ENST00000364671 133 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 Y_RNA.346-201ENST00000365385 112 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 Y_RNA.353-201ENST00000365440 108 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 Y_RNA.430-201ENST00000384081 110 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 MIR9-3-201ENST00000385084 90 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 MIR320A-201ENST00000385302 82 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 AL022718.1-201ENST00000412004 84 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.11□□□□□ -2.23
LITAFQ99732 AC003989.2-201ENST00000440224 169 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 AC245517.4-201ENST00000448601 281 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 RNU6-893P-201ENST00000458841 100 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 COX6CP6-201ENST00000490840 228 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 RNA5SP445-201ENST00000515889 115 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 SNORD33.1-201ENST00000516213 88 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 RNU6-165P-201ENST00000517170 99 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 MIR6841-201ENST00000637129 72 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 Z97988.1-201ENST00000637697 135 ntBASIC1.11□□□□□ -2.23
LITAFQ99732 SNORA22.1-201ENST00000362701 134 ntBASIC1.1□□□□□ -2.23
LITAFQ99732 SNORA25.3-201ENST00000363205 127 ntBASIC1.1□□□□□ -2.23
LITAFQ99732 SNORA80A-201ENST00000363922 136 ntBASIC1.1□□□□□ -2.23
LITAFQ99732 Y_RNA.273-201ENST00000364703 102 ntBASIC1.1□□□□□ -2.23
LITAFQ99732 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
LITAFQ99732 Y_RNA.629-201ENST00000411368 105 ntBASIC1.1□□□□□ -2.23
LITAFQ99732 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.1□□□□□ -2.23
LITAFQ99732 RPS3AP1-201ENST00000413190 320 ntBASIC1.1□□□□□ -2.23
LITAFQ99732 AC090844.1-201ENST00000422019 156 ntBASIC1.1□□□□□ -2.23
LITAFQ99732 AL512326.2-201ENST00000426359 151 ntBASIC1.1□□□□□ -2.23
LITAFQ99732 AL133373.1-201ENST00000497098 94 ntBASIC1.1□□□□□ -2.23
LITAFQ99732 RNU6-1258P-201ENST00000516911 111 ntBASIC1.1□□□□□ -2.23
LITAFQ99732 RNU6-902P-201ENST00000517212 91 ntBASIC1.1□□□□□ -2.23
LITAFQ99732 AC004812.1-201ENST00000540773 146 ntBASIC1.1□□□□□ -2.23
LITAFQ99732 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.09□□□□□ -2.23
LITAFQ99732 RNU6-834P-201ENST00000362367 110 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 Y_RNA.171-201ENST00000363760 102 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 RNU6-1104P-201ENST00000384723 104 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 SNORA48.2-201ENST00000390926 124 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 MIR1302-7-201ENST00000408841 72 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 RNU6-602P-201ENST00000411155 105 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.09□□□□□ -2.23
LITAFQ99732 AL356320.1-201ENST00000429616 163 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.09□□□□□ -2.23
LITAFQ99732 AP003716.2-201ENST00000528260 108 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 CYP3A52P-201ENST00000563326 91 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 AP000942.3-201ENST00000603702 160 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 AL670379.3-201ENST00000605040 251 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 AC006386.2-201ENST00000624491 75 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 AC012005.1-201ENST00000624575 75 ntBASIC1.09□□□□□ -2.23
LITAFQ99732 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.24
LITAFQ99732 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
LITAFQ99732 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
LITAFQ99732 Y_RNA.198-201ENST00000364013 98 ntBASIC1.08□□□□□ -2.24
LITAFQ99732 Y_RNA.531-201ENST00000384589 121 ntBASIC1.08□□□□□ -2.24
LITAFQ99732 MIR548A3-201ENST00000385297 97 ntBASIC1.08□□□□□ -2.24
LITAFQ99732 MT-TI-201ENST00000387365 69 ntBASIC1.08□□□□□ -2.24
LITAFQ99732 AC019129.1-201ENST00000403786 261 ntBASIC1.08□□□□□ -2.24
LITAFQ99732 RNU6-1064P-201ENST00000410626 104 ntBASIC1.08□□□□□ -2.24
LITAFQ99732 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.08□□□□□ -2.24
LITAFQ99732 RNU7-113P-201ENST00000459273 62 ntBASIC1.08□□□□□ -2.24
LITAFQ99732 AC022523.2-201ENST00000561045 150 ntBASIC1.08□□□□□ -2.24
LITAFQ99732 PRELID3BP2-201ENST00000605362 201 ntBASIC1.08□□□□□ -2.24
LITAFQ99732 MIR8065-201ENST00000620577 100 ntBASIC1.08□□□□□ -2.24
LITAFQ99732 AL121890.5-201ENST00000620848 304 ntBASIC1.08□□□□□ -2.24
LITAFQ99732 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
LITAFQ99732 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.08□□□□□ -2.24
LITAFQ99732 MIR208A-201ENST00000362287 71 ntBASIC1.07□□□□□ -2.24
LITAFQ99732 Y_RNA.213-201ENST00000364178 111 ntBASIC1.07□□□□□ -2.24
LITAFQ99732 Y_RNA.354-201ENST00000365448 111 ntBASIC1.07□□□□□ -2.24
LITAFQ99732 RNU6-1056P-201ENST00000383996 107 ntBASIC1.07□□□□□ -2.24
LITAFQ99732 RNU6-1144P-201ENST00000384247 104 ntBASIC1.07□□□□□ -2.24
LITAFQ99732 SNORD38B-201ENST00000384690 67 ntBASIC1.07□□□□□ -2.24
LITAFQ99732 RNU6-476P-201ENST00000384726 107 ntBASIC1.07□□□□□ -2.24
LITAFQ99732 AC245047.7-201ENST00000440265 293 ntBASIC1.07□□□□□ -2.24
LITAFQ99732 Y_RNA.649-201ENST00000459077 103 ntBASIC1.07□□□□□ -2.24
LITAFQ99732 AC113410.1-201ENST00000505029 247 ntBASIC1.07□□□□□ -2.24
LITAFQ99732 RN7SKP88-201ENST00000516847 250 ntBASIC1.07□□□□□ -2.24
LITAFQ99732 EIF4BP1-201ENST00000554881 351 ntBASIC1.07□□□□□ -2.24
LITAFQ99732 MTND5P34-201ENST00000568888 325 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms