Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 SNORD115-40-201ENST00000606510 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 MIR6078-201ENST00000611069 100 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 AL157834.3-201ENST00000615543 103 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.96□□□□□ -2.26
ZIM3Q96PE6 MIR6844-201ENST00000637122 62 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 RNU6-704P-201ENST00000364162 103 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.242-201ENST00000364473 110 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 RNU6-309P-201ENST00000364573 106 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.294-201ENST00000364916 102 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.410-201ENST00000383992 113 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 SNORA26.6-201ENST00000391256 115 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 RNU6-1190P-201ENST00000410811 104 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 AC090844.1-201ENST00000422019 156 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 AL392103.1-201ENST00000447000 198 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 AC087499.4-201ENST00000448505 178 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 AC087343.1-201ENST00000477341 475 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 RNU6-998P-201ENST00000515894 101 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 RNU7-40P-201ENST00000516397 64 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 IGKV1-22-201ENST00000524313 326 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 AL512310.8-201ENST00000550183 120 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 MIR3664-201ENST00000579074 99 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 MIR4764-201ENST00000580680 88 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 AL513534.2-201ENST00000603836 250 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 AC108081.1-201ENST00000604358 221 ntBASIC0.95□□□□□ -2.26
ZIM3Q96PE6 SNORD113-1-201ENST00000365321 69 ntBASIC0.94□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.363-201ENST00000365529 113 ntBASIC0.94□□□□□ -2.26
ZIM3Q96PE6 RNU6-1189P-201ENST00000383958 107 ntBASIC0.94□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.488-201ENST00000384403 102 ntBASIC0.94□□□□□ -2.26
ZIM3Q96PE6 SNORA40.5-201ENST00000391061 128 ntBASIC0.94□□□□□ -2.26
ZIM3Q96PE6 MIR548M-201ENST00000408260 86 ntBASIC0.94□□□□□ -2.26
ZIM3Q96PE6 BTF3P4-201ENST00000418852 495 ntBASIC0.94□□□□□ -2.26
ZIM3Q96PE6 MIR3937-201ENST00000580135 106 ntBASIC0.94□□□□□ -2.26
ZIM3Q96PE6 MIR3910-1-201ENST00000580936 111 ntBASIC0.94□□□□□ -2.26
ZIM3Q96PE6 AC091932.4-201ENST00000623386 200 ntBASIC0.94□□□□□ -2.26
ZIM3Q96PE6 AP001340.1-201ENST00000624405 217 ntBASIC0.94□□□□□ -2.26
ZIM3Q96PE6 AC008133.2-201ENST00000624540 351 ntBASIC0.94□□□□□ -2.26
ZIM3Q96PE6 AC010332.2-201ENST00000613083 1904 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 RNU6-349P-201ENST00000362402 107 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.120-201ENST00000363304 110 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.218-201ENST00000364218 104 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 SNORA27-201ENST00000384323 126 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 MIR802-201ENST00000390235 94 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.93□□□□□ -2.26
ZIM3Q96PE6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.93□□□□□ -2.26
ZIM3Q96PE6 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 SNORD111.1-201ENST00000516421 86 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 RNU6-406P-201ENST00000516470 107 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 MIR3121-201ENST00000579680 77 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 MIR548AO-201ENST00000579992 96 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 MIR4791-201ENST00000607666 84 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 GHRLOS.1-201ENST00000610995 70 ntBASIC0.93□□□□□ -2.26
ZIM3Q96PE6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
ZIM3Q96PE6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.93□□□□□ -2.26
ZIM3Q96PE6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
ZIM3Q96PE6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
ZIM3Q96PE6 RNA5SP327-201ENST00000362494 101 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.241-201ENST00000364470 117 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 RNU6-915P-201ENST00000364943 103 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.370-201ENST00000365589 108 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 MIR613-201ENST00000385248 95 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 AL603914.1-201ENST00000401964 204 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 MIR1185-1-201ENST00000408598 86 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 RNU7-45P-201ENST00000459460 63 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 RPS29P24-201ENST00000486345 171 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 AC108210.2-201ENST00000503681 201 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 RNU7-43P-201ENST00000516554 64 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 MIR8055-201ENST00000610739 97 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 AL353997.5-201ENST00000618886 171 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 AC012676.2-201ENST00000619258 186 ntBASIC0.92□□□□□ -2.26
ZIM3Q96PE6 RNU6-81P-201ENST00000365608 104 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 RNU6-1065P-201ENST00000384513 106 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.525-201ENST00000384570 113 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.537-201ENST00000384626 109 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 SNORD37.2-201ENST00000391075 66 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.584-201ENST00000391090 114 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 AL451046.2-201ENST00000403074 277 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.91□□□□□ -2.26
ZIM3Q96PE6 HMGN1P33-201ENST00000432945 451 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 RNU7-73P-201ENST00000458743 63 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 AL133373.1-201ENST00000497098 94 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 RNU6-1258P-201ENST00000516911 111 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 AL020996.3-201ENST00000606617 222 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 AC243994.1-201ENST00000618627 109 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 MIR6841-201ENST00000637129 72 ntBASIC0.91□□□□□ -2.26
ZIM3Q96PE6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
ZIM3Q96PE6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.9□□□□□ -2.26
ZIM3Q96PE6 MIR520C-201ENST00000385005 87 ntBASIC0.9□□□□□ -2.27
ZIM3Q96PE6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
ZIM3Q96PE6 RNU6-1054P-201ENST00000411293 104 ntBASIC0.9□□□□□ -2.27
ZIM3Q96PE6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.9□□□□□ -2.27
ZIM3Q96PE6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.9□□□□□ -2.27
ZIM3Q96PE6 RNU6-971P-201ENST00000516920 106 ntBASIC0.9□□□□□ -2.27
ZIM3Q96PE6 CYP3A52P-201ENST00000563326 91 ntBASIC0.9□□□□□ -2.27
ZIM3Q96PE6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.9□□□□□ -2.27
ZIM3Q96PE6 PRELID3BP2-201ENST00000605362 201 ntBASIC0.9□□□□□ -2.27
ZIM3Q96PE6 AL157777.2-201ENST00000258070 137 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 MIRLET7F2-201ENST00000385277 83 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 MIR513C-201ENST00000401352 84 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 Y_RNA.617-201ENST00000410920 90 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 POLR2J4-204ENST00000418424 324 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms