Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 RNU2-11P-201ENST00000459191 187 ntBASIC1.76□□□□□ -2.13
PTCD3Q96EY7 RNU7-45P-201ENST00000459460 63 ntBASIC1.76□□□□□ -2.13
PTCD3Q96EY7 COX6CP6-201ENST00000490840 228 ntBASIC1.76□□□□□ -2.13
PTCD3Q96EY7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.76□□□□□ -2.13
PTCD3Q96EY7 RNA5SP363-201ENST00000365072 115 ntBASIC1.75□□□□□ -2.13
PTCD3Q96EY7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PTCD3Q96EY7 AC244636.1-201ENST00000421152 228 ntBASIC1.75□□□□□ -2.13
PTCD3Q96EY7 RNU7-164P-201ENST00000459221 62 ntBASIC1.75□□□□□ -2.13
PTCD3Q96EY7 AC107297.1-201ENST00000459991 176 ntBASIC1.75□□□□□ -2.13
PTCD3Q96EY7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.75□□□□□ -2.13
PTCD3Q96EY7 RNU7-123P-201ENST00000515911 60 ntBASIC1.75□□□□□ -2.13
PTCD3Q96EY7 RNU6-958P-201ENST00000516995 106 ntBASIC1.75□□□□□ -2.13
PTCD3Q96EY7 SNORA74.3-201ENST00000517108 154 ntBASIC1.75□□□□□ -2.13
PTCD3Q96EY7 MIR4305-201ENST00000583252 102 ntBASIC1.75□□□□□ -2.13
PTCD3Q96EY7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.75□□□□□ -2.13
PTCD3Q96EY7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.74□□□□□ -2.13
PTCD3Q96EY7 Y_RNA.198-201ENST00000364013 98 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 RNU6-153P-201ENST00000364422 104 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 SNORA22-201ENST00000383907 134 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 MIR653-201ENST00000385279 96 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 JTBP1-201ENST00000441314 247 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 snoU13.23-201ENST00000458863 104 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 PDCD5P2-201ENST00000507570 312 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 AC022523.2-201ENST00000561045 150 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 DEFB122-202ENST00000569013 197 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 SNORA77B-201ENST00000578179 125 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 MIR3618-201ENST00000580330 88 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 MIR3683-201ENST00000580847 82 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 AC021613.1-201ENST00000623880 111 ntBASIC1.74□□□□□ -2.13
PTCD3Q96EY7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
PTCD3Q96EY7 RNU6-755P-201ENST00000364400 103 ntBASIC1.73□□□□□ -2.13
PTCD3Q96EY7 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
PTCD3Q96EY7 RNU6-913P-201ENST00000390913 95 ntBASIC1.73□□□□□ -2.13
PTCD3Q96EY7 AC003989.2-201ENST00000440224 169 ntBASIC1.73□□□□□ -2.13
PTCD3Q96EY7 RPS29P29-201ENST00000456396 171 ntBASIC1.73□□□□□ -2.13
PTCD3Q96EY7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.73□□□□□ -2.13
PTCD3Q96EY7 MIR4791-201ENST00000607666 84 ntBASIC1.73□□□□□ -2.13
PTCD3Q96EY7 AC243994.1-201ENST00000618627 109 ntBASIC1.73□□□□□ -2.13
PTCD3Q96EY7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.73□□□□□ -2.13
PTCD3Q96EY7 MIR302B-201ENST00000362188 73 ntBASIC1.72□□□□□ -2.13
PTCD3Q96EY7 RNU6-880P-201ENST00000384526 107 ntBASIC1.72□□□□□ -2.13
PTCD3Q96EY7 Y_RNA.549-201ENST00000384657 102 ntBASIC1.72□□□□□ -2.13
PTCD3Q96EY7 MIR583-201ENST00000384846 75 ntBASIC1.72□□□□□ -2.13
PTCD3Q96EY7 SNORA26.6-201ENST00000391256 115 ntBASIC1.72□□□□□ -2.13
PTCD3Q96EY7 RNU6-1190P-201ENST00000410811 104 ntBASIC1.72□□□□□ -2.13
PTCD3Q96EY7 RNA5SP144-201ENST00000410846 116 ntBASIC1.72□□□□□ -2.13
PTCD3Q96EY7 POLR2J4-204ENST00000418424 324 ntBASIC1.72□□□□□ -2.13
PTCD3Q96EY7 RNU7-67P-201ENST00000459003 62 ntBASIC1.72□□□□□ -2.13
PTCD3Q96EY7 AC007012.1-201ENST00000567192 175 ntBASIC1.72□□□□□ -2.13
PTCD3Q96EY7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PTCD3Q96EY7 RNU6-661P-201ENST00000362409 107 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 RNU6-414P-201ENST00000363705 104 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 Y_RNA.537-201ENST00000384626 109 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 RNU6-1319P-201ENST00000390855 104 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 RNU6-747P-201ENST00000390928 104 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 RNU6-241P-201ENST00000391148 104 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 RNU6-177P-201ENST00000411257 104 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 AL512326.2-201ENST00000426359 151 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 RPS29P11-201ENST00000496507 171 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 RNU6-1258P-201ENST00000516911 111 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 MIR4769-201ENST00000584126 77 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.71□□□□□ -2.14
PTCD3Q96EY7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
PTCD3Q96EY7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PTCD3Q96EY7 MIR513A1-201ENST00000385138 129 ntBASIC1.7□□□□□ -2.14
PTCD3Q96EY7 MIR1289-2-201ENST00000408360 111 ntBASIC1.7□□□□□ -2.14
PTCD3Q96EY7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.7□□□□□ -2.14
PTCD3Q96EY7 RNU7-73P-201ENST00000458743 63 ntBASIC1.7□□□□□ -2.14
PTCD3Q96EY7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.7□□□□□ -2.14
PTCD3Q96EY7 AC108210.2-201ENST00000503681 201 ntBASIC1.7□□□□□ -2.14
PTCD3Q96EY7 AC015688.6-201ENST00000577737 104 ntBASIC1.7□□□□□ -2.14
PTCD3Q96EY7 MIR4764-201ENST00000580680 88 ntBASIC1.7□□□□□ -2.14
PTCD3Q96EY7 MIR4713-201ENST00000582691 75 ntBASIC1.7□□□□□ -2.14
PTCD3Q96EY7 AL020996.3-201ENST00000606617 222 ntBASIC1.7□□□□□ -2.14
PTCD3Q96EY7 AC103810.8-201ENST00000607347 118 ntBASIC1.7□□□□□ -2.14
PTCD3Q96EY7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.7□□□□□ -2.14
PTCD3Q96EY7 Y_RNA.281-201ENST00000364774 94 ntBASIC1.69□□□□□ -2.14
PTCD3Q96EY7 RNA5SP259-201ENST00000365541 109 ntBASIC1.69□□□□□ -2.14
PTCD3Q96EY7 SNORA70.7-201ENST00000384159 133 ntBASIC1.69□□□□□ -2.14
PTCD3Q96EY7 SNORA40.18-201ENST00000391200 128 ntBASIC1.69□□□□□ -2.14
PTCD3Q96EY7 AL591806.2-201ENST00000433122 173 ntBASIC1.69□□□□□ -2.14
PTCD3Q96EY7 RNU7-53P-201ENST00000516705 60 ntBASIC1.69□□□□□ -2.14
PTCD3Q96EY7 MIR8055-201ENST00000610739 97 ntBASIC1.69□□□□□ -2.14
PTCD3Q96EY7 AL035470.1-201ENST00000622571 220 ntBASIC1.69□□□□□ -2.14
PTCD3Q96EY7 MIR6841-201ENST00000637129 72 ntBASIC1.69□□□□□ -2.14
PTCD3Q96EY7 Y_RNA.171-201ENST00000363760 102 ntBASIC1.68□□□□□ -2.14
PTCD3Q96EY7 SNORD41-201ENST00000386967 70 ntBASIC1.68□□□□□ -2.14
PTCD3Q96EY7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
PTCD3Q96EY7 U8.13-201ENST00000390842 128 ntBASIC1.68□□□□□ -2.14
PTCD3Q96EY7 RNU7-43P-201ENST00000516554 64 ntBASIC1.68□□□□□ -2.14
PTCD3Q96EY7 AC004812.1-201ENST00000540773 146 ntBASIC1.68□□□□□ -2.14
PTCD3Q96EY7 MIR4679-2-201ENST00000578358 77 ntBASIC1.68□□□□□ -2.14
PTCD3Q96EY7 MIR6717-201ENST00000622747 73 ntBASIC1.68□□□□□ -2.14
PTCD3Q96EY7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PTCD3Q96EY7 Y_RNA.213-201ENST00000364178 111 ntBASIC1.67□□□□□ -2.14
PTCD3Q96EY7 SNORA51.10-201ENST00000384418 136 ntBASIC1.67□□□□□ -2.14
PTCD3Q96EY7 Y_RNA.531-201ENST00000384589 121 ntBASIC1.67□□□□□ -2.14
PTCD3Q96EY7 MIR520C-201ENST00000385005 87 ntBASIC1.67□□□□□ -2.14
PTCD3Q96EY7 HMGN1P33-201ENST00000432945 451 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 748 ms