Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SNORA38.1-201ENST00000364172 131 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 RNU6-499P-201ENST00000365615 107 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 RNU1-109P-201ENST00000383960 147 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 MIR490-201ENST00000384865 128 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 RNA5SP120-201ENST00000410900 112 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.94□□□□□ -1.94
HPS1Q92902 AC115115.1-201ENST00000449927 248 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 AC005908.1-201ENST00000468701 347 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 AC023790.1-201ENST00000482174 347 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 AC104996.3-201ENST00000590718 94 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 AL357312.1-201ENST00000603879 298 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 AC067747.1-201ENST00000608026 250 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 AL513423.1-201ENST00000621695 132 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 MIR3651-201ENST00000630427 90 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 WWP1P1-201ENST00000466609 2769 ntBASIC2.94□□□□□ -1.94
HPS1Q92902 RNU1-58P-201ENST00000362413 163 ntBASIC2.93□□□□□ -1.94
HPS1Q92902 HSPE1P24-201ENST00000450782 238 ntBASIC2.93□□□□□ -1.94
HPS1Q92902 SCARNA16.3-201ENST00000516595 184 ntBASIC2.93□□□□□ -1.94
HPS1Q92902 SNORA70.18-201ENST00000516696 98 ntBASIC2.93□□□□□ -1.94
HPS1Q92902 MIR5094-201ENST00000578766 85 ntBASIC2.93□□□□□ -1.94
HPS1Q92902 MIR3064-201ENST00000581130 66 ntBASIC2.93□□□□□ -1.94
HPS1Q92902 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
HPS1Q92902 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HPS1Q92902 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HPS1Q92902 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HPS1Q92902 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.92□□□□□ -1.94
HPS1Q92902 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HPS1Q92902 RNU4-35P-201ENST00000362588 141 ntBASIC2.92□□□□□ -1.94
HPS1Q92902 MIR660-201ENST00000385235 97 ntBASIC2.92□□□□□ -1.94
HPS1Q92902 MIR154-201ENST00000385243 84 ntBASIC2.92□□□□□ -1.94
HPS1Q92902 AC015818.7-201ENST00000428754 109 ntBASIC2.92□□□□□ -1.94
HPS1Q92902 AC005326.1-201ENST00000429197 123 ntBASIC2.92□□□□□ -1.94
HPS1Q92902 RPS27P21-201ENST00000486977 252 ntBASIC2.92□□□□□ -1.94
HPS1Q92902 RNU7-43P-201ENST00000516554 64 ntBASIC2.92□□□□□ -1.94
HPS1Q92902 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.92□□□□□ -1.94
HPS1Q92902 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HPS1Q92902 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
HPS1Q92902 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HPS1Q92902 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
HPS1Q92902 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HPS1Q92902 AC009487.2-201ENST00000420969 6821 ntBASIC2.91□□□□□ -1.94
HPS1Q92902 SNORD115-31-201ENST00000365318 82 ntBASIC2.91□□□□□ -1.94
HPS1Q92902 SNORD38B-201ENST00000384690 67 ntBASIC2.91□□□□□ -1.94
HPS1Q92902 SNORD17-201ENST00000390930 237 ntBASIC2.91□□□□□ -1.94
HPS1Q92902 RNA5SP237-201ENST00000410414 113 ntBASIC2.91□□□□□ -1.94
HPS1Q92902 RNU6-141P-201ENST00000410499 105 ntBASIC2.91□□□□□ -1.94
HPS1Q92902 RNU7-156P-201ENST00000517214 74 ntBASIC2.91□□□□□ -1.94
HPS1Q92902 AC026271.5-201ENST00000577873 130 ntBASIC2.91□□□□□ -1.94
HPS1Q92902 MIR4500-201ENST00000579472 76 ntBASIC2.91□□□□□ -1.94
HPS1Q92902 MIR3616-201ENST00000584070 92 ntBASIC2.91□□□□□ -1.94
HPS1Q92902 AC008133.2-201ENST00000624540 351 ntBASIC2.91□□□□□ -1.94
HPS1Q92902 SNORD38B-202ENST00000625943 69 ntBASIC2.91□□□□□ -1.94
HPS1Q92902 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.91□□□□□ -1.94
HPS1Q92902 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HPS1Q92902 RNU6-132P-201ENST00000383863 107 ntBASIC2.9□□□□□ -1.95
HPS1Q92902 RNU6-949P-201ENST00000384040 107 ntBASIC2.9□□□□□ -1.95
HPS1Q92902 Y_RNA.491-201ENST00000384417 107 ntBASIC2.9□□□□□ -1.95
HPS1Q92902 MIR548U-201ENST00000390728 81 ntBASIC2.9□□□□□ -1.95
HPS1Q92902 RNU6-75P-201ENST00000515944 104 ntBASIC2.9□□□□□ -1.95
HPS1Q92902 YWHAEP2-201ENST00000580066 112 ntBASIC2.9□□□□□ -1.95
HPS1Q92902 YWHAEP3-201ENST00000582767 121 ntBASIC2.9□□□□□ -1.95
HPS1Q92902 AC005520.4-201ENST00000604337 90 ntBASIC2.9□□□□□ -1.95
HPS1Q92902 AL662814.1-201ENST00000617364 121 ntBASIC2.9□□□□□ -1.95
HPS1Q92902 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HPS1Q92902 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HPS1Q92902 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HPS1Q92902 Y_RNA.12-201ENST00000362393 112 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 SNORD36A-201ENST00000362874 73 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 MIR634-201ENST00000385208 97 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 MIR29C-201ENST00000385231 88 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 AL023284.1-201ENST00000403956 276 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 AC244636.1-201ENST00000421152 228 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 AC027119.1-201ENST00000440877 241 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 AC025518.1-201ENST00000479856 347 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 AP004217.1-201ENST00000480579 346 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 AC138749.4-201ENST00000563970 127 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 Z82195.2-201ENST00000612348 18351 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 AC021506.2-201ENST00000612354 169 ntBASIC2.89□□□□□ -1.95
HPS1Q92902 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HPS1Q92902 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HPS1Q92902 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HPS1Q92902 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
HPS1Q92902 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
HPS1Q92902 SNORD92-201ENST00000585078 85 ntBASIC2.88□□□□□ -1.95
HPS1Q92902 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HPS1Q92902 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HPS1Q92902 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.87□□□□□ -1.95
HPS1Q92902 Y_RNA.36-201ENST00000362602 112 ntBASIC2.87□□□□□ -1.95
HPS1Q92902 SNORD115-3-201ENST00000363100 82 ntBASIC2.87□□□□□ -1.95
HPS1Q92902 Y_RNA.283-201ENST00000364798 112 ntBASIC2.87□□□□□ -1.95
HPS1Q92902 SNORA8.1-201ENST00000384250 140 ntBASIC2.87□□□□□ -1.95
HPS1Q92902 RNU6-205P-201ENST00000390858 107 ntBASIC2.87□□□□□ -1.95
HPS1Q92902 MIR548AO-201ENST00000579992 96 ntBASIC2.87□□□□□ -1.95
HPS1Q92902 MIR4764-201ENST00000580680 88 ntBASIC2.87□□□□□ -1.95
HPS1Q92902 MIR8057-201ENST00000620957 69 ntBASIC2.87□□□□□ -1.95
HPS1Q92902 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HPS1Q92902 MAPK10-266ENST00000641066 6555 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 236.3 ms