Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 Y_RNA.491-201ENST00000384417 107 ntBASIC3.36□□□□□ -1.87
PTCD2Q8WV60 RNU6-540P-201ENST00000384622 101 ntBASIC3.36□□□□□ -1.87
PTCD2Q8WV60 RNU6-987P-201ENST00000384759 104 ntBASIC3.36□□□□□ -1.87
PTCD2Q8WV60 MIR154-201ENST00000385243 84 ntBASIC3.36□□□□□ -1.87
PTCD2Q8WV60 RNU6-243P-201ENST00000391140 107 ntBASIC3.36□□□□□ -1.87
PTCD2Q8WV60 HMGN2P39-201ENST00000398005 273 ntBASIC3.36□□□□□ -1.87
PTCD2Q8WV60 MTND4LP19-201ENST00000403051 166 ntBASIC3.36□□□□□ -1.87
PTCD2Q8WV60 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.36□□□□□ -1.87
PTCD2Q8WV60 AC011753.1-201ENST00000451001 220 ntBASIC3.36□□□□□ -1.87
PTCD2Q8WV60 AC099513.1-201ENST00000490423 301 ntBASIC3.36□□□□□ -1.87
PTCD2Q8WV60 MIR3064-201ENST00000581130 66 ntBASIC3.36□□□□□ -1.87
PTCD2Q8WV60 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.36□□□□□ -1.87
PTCD2Q8WV60 AC067747.1-201ENST00000608026 250 ntBASIC3.36□□□□□ -1.87
PTCD2Q8WV60 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCD2Q8WV60 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PTCD2Q8WV60 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTCD2Q8WV60 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PTCD2Q8WV60 RNA5SP383-201ENST00000362934 120 ntBASIC3.35□□□□□ -1.87
PTCD2Q8WV60 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PTCD2Q8WV60 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.35□□□□□ -1.87
PTCD2Q8WV60 RNA5SP120-201ENST00000410900 112 ntBASIC3.35□□□□□ -1.87
PTCD2Q8WV60 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.35□□□□□ -1.87
PTCD2Q8WV60 AC104027.1-201ENST00000521887 300 ntBASIC3.35□□□□□ -1.87
PTCD2Q8WV60 uc_338.1-201ENST00000612113 180 ntBASIC3.35□□□□□ -1.87
PTCD2Q8WV60 WWP1P1-201ENST00000466609 2769 ntBASIC3.35□□□□□ -1.87
PTCD2Q8WV60 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PTCD2Q8WV60 MIR148B-201ENST00000362252 99 ntBASIC3.34□□□□□ -1.87
PTCD2Q8WV60 Y_RNA.119-201ENST00000363301 96 ntBASIC3.34□□□□□ -1.87
PTCD2Q8WV60 RNU6-296P-201ENST00000384608 107 ntBASIC3.34□□□□□ -1.87
PTCD2Q8WV60 RNU6-1254P-201ENST00000391266 104 ntBASIC3.34□□□□□ -1.87
PTCD2Q8WV60 RNU4-37P-201ENST00000410214 84 ntBASIC3.34□□□□□ -1.87
PTCD2Q8WV60 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.34□□□□□ -1.87
PTCD2Q8WV60 HMGN2P3-201ENST00000433603 273 ntBASIC3.34□□□□□ -1.87
PTCD2Q8WV60 HMGN2P5-201ENST00000436882 273 ntBASIC3.34□□□□□ -1.87
PTCD2Q8WV60 AC115115.1-201ENST00000449927 248 ntBASIC3.34□□□□□ -1.87
PTCD2Q8WV60 SNORD92-201ENST00000585078 85 ntBASIC3.34□□□□□ -1.87
PTCD2Q8WV60 MIR7112-201ENST00000616126 65 ntBASIC3.34□□□□□ -1.87
PTCD2Q8WV60 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
PTCD2Q8WV60 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
PTCD2Q8WV60 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PTCD2Q8WV60 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTCD2Q8WV60 AC108206.1-201ENST00000570186 4159 ntBASIC3.33□□□□□ -1.88
PTCD2Q8WV60 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTCD2Q8WV60 Y_RNA.283-201ENST00000364798 112 ntBASIC3.33□□□□□ -1.88
PTCD2Q8WV60 RNU6-132P-201ENST00000383863 107 ntBASIC3.33□□□□□ -1.88
PTCD2Q8WV60 AC005908.1-201ENST00000468701 347 ntBASIC3.33□□□□□ -1.88
PTCD2Q8WV60 AL096861.1-201ENST00000610899 123 ntBASIC3.33□□□□□ -1.88
PTCD2Q8WV60 MIR3651-201ENST00000630427 90 ntBASIC3.33□□□□□ -1.88
PTCD2Q8WV60 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PTCD2Q8WV60 Y_RNA.12-201ENST00000362393 112 ntBASIC3.32□□□□□ -1.88
PTCD2Q8WV60 SNORD36A-201ENST00000362874 73 ntBASIC3.32□□□□□ -1.88
PTCD2Q8WV60 SNORA8.1-201ENST00000384250 140 ntBASIC3.32□□□□□ -1.88
PTCD2Q8WV60 MIR516A2-201ENST00000384888 90 ntBASIC3.32□□□□□ -1.88
PTCD2Q8WV60 MIR516A1-201ENST00000385033 90 ntBASIC3.32□□□□□ -1.88
PTCD2Q8WV60 MIR520H-201ENST00000385126 88 ntBASIC3.32□□□□□ -1.88
PTCD2Q8WV60 RNU6-663P-201ENST00000391105 106 ntBASIC3.32□□□□□ -1.88
PTCD2Q8WV60 RNU6-466P-201ENST00000391224 103 ntBASIC3.32□□□□□ -1.88
PTCD2Q8WV60 RNA5SP229-201ENST00000410809 99 ntBASIC3.32□□□□□ -1.88
PTCD2Q8WV60 SNORA64.4-201ENST00000516632 81 ntBASIC3.32□□□□□ -1.88
PTCD2Q8WV60 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.32□□□□□ -1.88
PTCD2Q8WV60 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.32□□□□□ -1.88
PTCD2Q8WV60 MIR4276-201ENST00000584832 70 ntBASIC3.32□□□□□ -1.88
PTCD2Q8WV60 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTCD2Q8WV60 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PTCD2Q8WV60 RNU6-471P-201ENST00000383944 106 ntBASIC3.31□□□□□ -1.88
PTCD2Q8WV60 RNU6-1241P-201ENST00000384536 107 ntBASIC3.31□□□□□ -1.88
PTCD2Q8WV60 AC074348.1-201ENST00000426503 132 ntBASIC3.31□□□□□ -1.88
PTCD2Q8WV60 AC093423.1-201ENST00000440817 142 ntBASIC3.31□□□□□ -1.88
PTCD2Q8WV60 YWHAEP2-201ENST00000580066 112 ntBASIC3.31□□□□□ -1.88
PTCD2Q8WV60 YWHAEP3-201ENST00000582767 121 ntBASIC3.31□□□□□ -1.88
PTCD2Q8WV60 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTCD2Q8WV60 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.3□□□□□ -1.88
PTCD2Q8WV60 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.3□□□□□ -1.88
PTCD2Q8WV60 SNORD56.3-201ENST00000363507 71 ntBASIC3.3□□□□□ -1.88
PTCD2Q8WV60 RNU6-112P-201ENST00000363599 104 ntBASIC3.3□□□□□ -1.88
PTCD2Q8WV60 SNORA48.1-201ENST00000390879 135 ntBASIC3.3□□□□□ -1.88
PTCD2Q8WV60 RNA5SP465-201ENST00000391195 109 ntBASIC3.3□□□□□ -1.88
PTCD2Q8WV60 AC104389.3-201ENST00000445629 235 ntBASIC3.3□□□□□ -1.88
PTCD2Q8WV60 snoU13.2-201ENST00000459201 104 ntBASIC3.3□□□□□ -1.88
PTCD2Q8WV60 SCARNA20.6-201ENST00000517251 106 ntBASIC3.3□□□□□ -1.88
PTCD2Q8WV60 MIR588-201ENST00000384900 83 ntBASIC3.29□□□□□ -1.88
PTCD2Q8WV60 AC245517.4-201ENST00000448601 281 ntBASIC3.29□□□□□ -1.88
PTCD2Q8WV60 RNA5SP445-201ENST00000515889 115 ntBASIC3.29□□□□□ -1.88
PTCD2Q8WV60 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
PTCD2Q8WV60 MIR4513-201ENST00000581077 86 ntBASIC3.29□□□□□ -1.88
PTCD2Q8WV60 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.29□□□□□ -1.88
PTCD2Q8WV60 AC092435.3-201ENST00000565538 3654 ntBASIC3.29□□□□□ -1.88
PTCD2Q8WV60 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.28□□□□□ -1.88
PTCD2Q8WV60 MIR1283-2-201ENST00000408621 87 ntBASIC3.28□□□□□ -1.88
PTCD2Q8WV60 RNU6-75P-201ENST00000515944 104 ntBASIC3.28□□□□□ -1.88
PTCD2Q8WV60 RNA5SP385-201ENST00000515947 110 ntBASIC3.28□□□□□ -1.88
PTCD2Q8WV60 MIR4298-201ENST00000584380 73 ntBASIC3.28□□□□□ -1.88
PTCD2Q8WV60 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.28□□□□□ -1.88
PTCD2Q8WV60 MIRLET7F1-201ENST00000362202 87 ntBASIC3.27□□□□□ -1.89
PTCD2Q8WV60 MIR627-201ENST00000384979 97 ntBASIC3.27□□□□□ -1.89
PTCD2Q8WV60 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PTCD2Q8WV60 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PTCD2Q8WV60 AC009474.2-201ENST00000451383 136 ntBASIC3.27□□□□□ -1.89
PTCD2Q8WV60 RNU7-41P-201ENST00000515917 61 ntBASIC3.27□□□□□ -1.89
PTCD2Q8WV60 RNU6-322P-201ENST00000516010 103 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 231.3 ms