Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU11-5P-201ENST00000391216 129 ntBASIC2.26□□□□□ -2.05
SH3RF3Q8TEJ3 HMGN2P39-201ENST00000398005 273 ntBASIC2.26□□□□□ -2.05
SH3RF3Q8TEJ3 AC055731.1-201ENST00000474387 401 ntBASIC2.26□□□□□ -2.05
SH3RF3Q8TEJ3 SNORD45.4-201ENST00000516629 73 ntBASIC2.26□□□□□ -2.05
SH3RF3Q8TEJ3 RNU7-70P-201ENST00000516941 66 ntBASIC2.26□□□□□ -2.05
SH3RF3Q8TEJ3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.26□□□□□ -2.05
SH3RF3Q8TEJ3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.26□□□□□ -2.05
SH3RF3Q8TEJ3 SNORD115-35-201ENST00000365122 82 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 MIR9-3-201ENST00000385084 90 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 RNU6-402P-201ENST00000410678 103 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 AL606517.2-201ENST00000442855 241 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 AC087499.4-201ENST00000448505 178 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 RNU7-80P-201ENST00000459562 61 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 RPS29P11-201ENST00000496507 171 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 AL163195.1-201ENST00000496941 348 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 RNU1-142P-201ENST00000516682 145 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 SNORA18.7-201ENST00000516910 131 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 AC004812.1-201ENST00000540773 146 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 MIR5588-201ENST00000581890 63 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 IGLL4P-201ENST00000614590 133 ntBASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SH3RF3Q8TEJ3 snoU2-30.1-201ENST00000365012 70 ntBASIC2.24□□□□□ -2.05
SH3RF3Q8TEJ3 Y_RNA.336-201ENST00000365307 109 ntBASIC2.24□□□□□ -2.05
SH3RF3Q8TEJ3 MIR802-201ENST00000390235 94 ntBASIC2.24□□□□□ -2.05
SH3RF3Q8TEJ3 RNU6-679P-201ENST00000391003 106 ntBASIC2.24□□□□□ -2.05
SH3RF3Q8TEJ3 SRIP3-201ENST00000413200 219 ntBASIC2.24□□□□□ -2.05
SH3RF3Q8TEJ3 POLR2J4-204ENST00000418424 324 ntBASIC2.24□□□□□ -2.05
SH3RF3Q8TEJ3 HMGN2P38-201ENST00000423806 265 ntBASIC2.24□□□□□ -2.05
SH3RF3Q8TEJ3 RNU6-717P-201ENST00000459076 104 ntBASIC2.24□□□□□ -2.05
SH3RF3Q8TEJ3 MIR1270-201ENST00000459320 83 ntBASIC2.24□□□□□ -2.05
SH3RF3Q8TEJ3 RNU7-171P-201ENST00000459581 62 ntBASIC2.24□□□□□ -2.05
SH3RF3Q8TEJ3 RNU6-857P-201ENST00000515893 110 ntBASIC2.24□□□□□ -2.05
SH3RF3Q8TEJ3 AL513534.2-201ENST00000603836 250 ntBASIC2.24□□□□□ -2.05
SH3RF3Q8TEJ3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 Y_RNA.10-201ENST00000362371 110 ntBASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 RNU6-1084P-201ENST00000362498 107 ntBASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 RNU1-17P-201ENST00000363022 152 ntBASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 Y_RNA.226-201ENST00000364337 114 ntBASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 RNU4-67P-201ENST00000364569 141 ntBASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 RNU6-60P-201ENST00000364792 103 ntBASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 RNU6-1296P-201ENST00000383879 107 ntBASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 SNORA8-201ENST00000384574 139 ntBASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 AL627390.1-201ENST00000396055 340 ntBASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 RN7SKP200-201ENST00000410564 320 ntBASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 RNU6-733P-201ENST00000410759 104 ntBASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 RNU6-1258P-201ENST00000516911 111 ntBASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SH3RF3Q8TEJ3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SH3RF3Q8TEJ3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SH3RF3Q8TEJ3 Y_RNA.118-201ENST00000363300 101 ntBASIC2.22□□□□□ -2.05
SH3RF3Q8TEJ3 Y_RNA.155-201ENST00000363632 101 ntBASIC2.22□□□□□ -2.05
SH3RF3Q8TEJ3 Y_RNA.454-201ENST00000384224 113 ntBASIC2.22□□□□□ -2.05
SH3RF3Q8TEJ3 Y_RNA.507-201ENST00000384500 99 ntBASIC2.22□□□□□ -2.05
SH3RF3Q8TEJ3 MIR17-201ENST00000385012 84 ntBASIC2.22□□□□□ -2.05
SH3RF3Q8TEJ3 RNU6-998P-201ENST00000515894 101 ntBASIC2.22□□□□□ -2.05
SH3RF3Q8TEJ3 RNU1-40P-201ENST00000516816 164 ntBASIC2.22□□□□□ -2.05
SH3RF3Q8TEJ3 RNU1-97P-201ENST00000516872 164 ntBASIC2.22□□□□□ -2.05
SH3RF3Q8TEJ3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.22□□□□□ -2.05
SH3RF3Q8TEJ3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SH3RF3Q8TEJ3 SNORD115-13-201ENST00000363358 82 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 SNORD115-16-201ENST00000363887 82 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 SNORD115-1-201ENST00000364961 82 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 RNU6-409P-201ENST00000384114 104 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 RNU6-242P-201ENST00000384359 107 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 MIR518A2-201ENST00000384966 87 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 SNX2P2-201ENST00000424553 323 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 RNU7-94P-201ENST00000459576 63 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 AC090255.1-201ENST00000495779 349 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 AC024995.1-201ENST00000523014 93 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 MIR4778-201ENST00000577635 80 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 MIR4448-201ENST00000584360 86 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 MIR8081-201ENST00000611533 95 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 AC021613.1-201ENST00000623880 111 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SH3RF3Q8TEJ3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 MIRLET7C-201ENST00000362160 84 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 Y_RNA.377-201ENST00000365644 108 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 Y_RNA.467-201ENST00000384297 102 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 SNORA27-201ENST00000384323 126 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 RNA5SP465-201ENST00000391195 109 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 MIR1287-201ENST00000408492 90 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 AC139453.2-201ENST00000487255 133 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 RNU6-1116P-201ENST00000517269 99 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 AC022202.1-201ENST00000613515 211 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 AC084768.2-201ENST00000622736 221 ntBASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.2□□□□□ -2.06
SH3RF3Q8TEJ3 MIR342-201ENST00000362212 99 ntBASIC2.19□□□□□ -2.06
SH3RF3Q8TEJ3 Y_RNA.95-201ENST00000363079 95 ntBASIC2.19□□□□□ -2.06
SH3RF3Q8TEJ3 Y_RNA.171-201ENST00000363760 102 ntBASIC2.19□□□□□ -2.06
SH3RF3Q8TEJ3 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms