Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RNU6-807P-201ENST00000516805 107 ntBASIC3.4□□□□□ -1.87
NKX2-3Q8TAU0 MIR8055-201ENST00000610739 97 ntBASIC3.4□□□□□ -1.87
NKX2-3Q8TAU0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.4□□□□□ -1.87
NKX2-3Q8TAU0 AL449363.1-201ENST00000617815 186 ntBASIC3.4□□□□□ -1.87
NKX2-3Q8TAU0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-3Q8TAU0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.39□□□□□ -1.87
NKX2-3Q8TAU0 HSBP1P2-201ENST00000299671 229 ntBASIC3.39□□□□□ -1.87
NKX2-3Q8TAU0 RNU6-471P-201ENST00000383944 106 ntBASIC3.39□□□□□ -1.87
NKX2-3Q8TAU0 MIR452-201ENST00000385020 85 ntBASIC3.39□□□□□ -1.87
NKX2-3Q8TAU0 MIR136-201ENST00000385207 82 ntBASIC3.39□□□□□ -1.87
NKX2-3Q8TAU0 AL513328.1-201ENST00000446460 224 ntBASIC3.39□□□□□ -1.87
NKX2-3Q8TAU0 AC006483.1-201ENST00000487308 313 ntBASIC3.39□□□□□ -1.87
NKX2-3Q8TAU0 AC018868.1-201ENST00000491307 315 ntBASIC3.39□□□□□ -1.87
NKX2-3Q8TAU0 AP001362.1-201ENST00000625165 124 ntBASIC3.39□□□□□ -1.87
NKX2-3Q8TAU0 AC108206.1-201ENST00000570186 4159 ntBASIC3.39□□□□□ -1.87
NKX2-3Q8TAU0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.39□□□□□ -1.87
NKX2-3Q8TAU0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-3Q8TAU0 Y_RNA.508-201ENST00000384502 114 ntBASIC3.38□□□□□ -1.87
NKX2-3Q8TAU0 AC104332.2-201ENST00000429959 156 ntBASIC3.38□□□□□ -1.87
NKX2-3Q8TAU0 RNU6-70P-201ENST00000516438 60 ntBASIC3.38□□□□□ -1.87
NKX2-3Q8TAU0 MIR4796-201ENST00000580742 81 ntBASIC3.38□□□□□ -1.87
NKX2-3Q8TAU0 MIR8066-201ENST00000617280 78 ntBASIC3.38□□□□□ -1.87
NKX2-3Q8TAU0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-3Q8TAU0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-3Q8TAU0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-3Q8TAU0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-3Q8TAU0 RNU5F-1-201ENST00000362507 117 ntBASIC3.37□□□□□ -1.87
NKX2-3Q8TAU0 RNU6-800P-201ENST00000384473 103 ntBASIC3.37□□□□□ -1.87
NKX2-3Q8TAU0 Y_RNA.537-201ENST00000384626 109 ntBASIC3.37□□□□□ -1.87
NKX2-3Q8TAU0 RNU6-220P-201ENST00000390919 107 ntBASIC3.37□□□□□ -1.87
NKX2-3Q8TAU0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX2-3Q8TAU0 SNORD109B-201ENST00000458961 67 ntBASIC3.37□□□□□ -1.87
NKX2-3Q8TAU0 SNORD109A-201ENST00000459128 67 ntBASIC3.37□□□□□ -1.87
NKX2-3Q8TAU0 AP004217.1-201ENST00000480579 346 ntBASIC3.37□□□□□ -1.87
NKX2-3Q8TAU0 AL355297.2-201ENST00000604792 129 ntBASIC3.37□□□□□ -1.87
NKX2-3Q8TAU0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-3Q8TAU0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-3Q8TAU0 RNU6-461P-201ENST00000364195 107 ntBASIC3.36□□□□□ -1.87
NKX2-3Q8TAU0 U8.16-201ENST00000391279 133 ntBASIC3.36□□□□□ -1.87
NKX2-3Q8TAU0 SNORA11.4-201ENST00000408823 129 ntBASIC3.36□□□□□ -1.87
NKX2-3Q8TAU0 snoU13.16-201ENST00000459350 104 ntBASIC3.36□□□□□ -1.87
NKX2-3Q8TAU0 AC008413.1-201ENST00000511864 177 ntBASIC3.36□□□□□ -1.87
NKX2-3Q8TAU0 RNA5SP24-201ENST00000516478 95 ntBASIC3.36□□□□□ -1.87
NKX2-3Q8TAU0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.36□□□□□ -1.87
NKX2-3Q8TAU0 MIR8065-201ENST00000620577 100 ntBASIC3.36□□□□□ -1.87
NKX2-3Q8TAU0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 RNU6-161P-201ENST00000363051 106 ntBASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 AL034345.1-201ENST00000407768 123 ntBASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 MIR1262-201ENST00000408276 93 ntBASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 SNORA31.10-201ENST00000516482 106 ntBASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 MIR548AR-201ENST00000582191 57 ntBASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 AC008163.1-202ENST00000636004 2889 ntBASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.35□□□□□ -1.87
NKX2-3Q8TAU0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
NKX2-3Q8TAU0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-3Q8TAU0 Y_RNA.264-201ENST00000364665 102 ntBASIC3.34□□□□□ -1.87
NKX2-3Q8TAU0 Y_RNA.532-201ENST00000384590 113 ntBASIC3.34□□□□□ -1.87
NKX2-3Q8TAU0 RNU6-296P-201ENST00000384608 107 ntBASIC3.34□□□□□ -1.87
NKX2-3Q8TAU0 RNU6-1072P-201ENST00000384703 107 ntBASIC3.34□□□□□ -1.87
NKX2-3Q8TAU0 RNU6-1067P-201ENST00000384752 107 ntBASIC3.34□□□□□ -1.87
NKX2-3Q8TAU0 RNU6-443P-201ENST00000384780 107 ntBASIC3.34□□□□□ -1.87
NKX2-3Q8TAU0 RNA5SP274-201ENST00000410484 108 ntBASIC3.34□□□□□ -1.87
NKX2-3Q8TAU0 AC003982.1-202ENST00000469928 248 ntBASIC3.34□□□□□ -1.87
NKX2-3Q8TAU0 RNA5SP168-201ENST00000516642 112 ntBASIC3.34□□□□□ -1.87
NKX2-3Q8TAU0 AC105081.1-201ENST00000617727 106 ntBASIC3.34□□□□□ -1.87
NKX2-3Q8TAU0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.88
NKX2-3Q8TAU0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.34□□□□□ -1.88
NKX2-3Q8TAU0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NKX2-3Q8TAU0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
NKX2-3Q8TAU0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-3Q8TAU0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-3Q8TAU0 RNA5SP493-201ENST00000364115 91 ntBASIC3.33□□□□□ -1.88
NKX2-3Q8TAU0 MIR520H-201ENST00000385126 88 ntBASIC3.33□□□□□ -1.88
NKX2-3Q8TAU0 MIR516B2-201ENST00000385190 85 ntBASIC3.33□□□□□ -1.88
NKX2-3Q8TAU0 RNU6-587P-201ENST00000391282 106 ntBASIC3.33□□□□□ -1.88
NKX2-3Q8TAU0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.33□□□□□ -1.88
NKX2-3Q8TAU0 HMGN1P33-201ENST00000432945 451 ntBASIC3.33□□□□□ -1.88
NKX2-3Q8TAU0 U6.111-201ENST00000636093 83 ntBASIC3.33□□□□□ -1.88
NKX2-3Q8TAU0 U8.2-201ENST00000363156 134 ntBASIC3.32□□□□□ -1.88
NKX2-3Q8TAU0 SNORA25B-201ENST00000365507 128 ntBASIC3.32□□□□□ -1.88
NKX2-3Q8TAU0 RNU7-85P-201ENST00000458851 63 ntBASIC3.32□□□□□ -1.88
NKX2-3Q8TAU0 snoU13.15-201ENST00000459407 104 ntBASIC3.32□□□□□ -1.88
NKX2-3Q8TAU0 Y_RNA.648-201ENST00000459455 110 ntBASIC3.32□□□□□ -1.88
NKX2-3Q8TAU0 RPS29P11-201ENST00000496507 171 ntBASIC3.32□□□□□ -1.88
NKX2-3Q8TAU0 RNU7-12P-201ENST00000516030 62 ntBASIC3.32□□□□□ -1.88
NKX2-3Q8TAU0 Z97988.1-201ENST00000637697 135 ntBASIC3.32□□□□□ -1.88
NKX2-3Q8TAU0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-3Q8TAU0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 SNORA9.2-201ENST00000365361 133 ntBASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 RNU6-540P-201ENST00000384622 101 ntBASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 RNU6-950P-201ENST00000384651 107 ntBASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 SNORD30.1-201ENST00000391309 70 ntBASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 SNORD123-201ENST00000459473 70 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 703.5 ms