Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MIR3670-2-201ENST00000582974 65 ntBASIC2.69□□□□□ -1.98
SIX5Q8N196 MIR3670-1-201ENST00000584160 65 ntBASIC2.69□□□□□ -1.98
SIX5Q8N196 MIR3670-3-201ENST00000584855 65 ntBASIC2.69□□□□□ -1.98
SIX5Q8N196 AL049779.4-201ENST00000604500 156 ntBASIC2.69□□□□□ -1.98
SIX5Q8N196 MIR3670-4-201ENST00000612260 65 ntBASIC2.69□□□□□ -1.98
SIX5Q8N196 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.69□□□□□ -1.98
SIX5Q8N196 MIR26A1-201ENST00000362205 77 ntBASIC2.68□□□□□ -1.98
SIX5Q8N196 Y_RNA.354-201ENST00000365448 111 ntBASIC2.68□□□□□ -1.98
SIX5Q8N196 Y_RNA.360-201ENST00000365512 102 ntBASIC2.68□□□□□ -1.98
SIX5Q8N196 RNU6-49P-201ENST00000384256 107 ntBASIC2.68□□□□□ -1.98
SIX5Q8N196 RNU6-616P-201ENST00000384353 107 ntBASIC2.68□□□□□ -1.98
SIX5Q8N196 SNORD23.1-201ENST00000408212 104 ntBASIC2.68□□□□□ -1.98
SIX5Q8N196 Y_RNA.601-201ENST00000410500 113 ntBASIC2.68□□□□□ -1.98
SIX5Q8N196 RNA5SP320-201ENST00000516263 124 ntBASIC2.68□□□□□ -1.98
SIX5Q8N196 RNU6-917P-201ENST00000516294 104 ntBASIC2.68□□□□□ -1.98
SIX5Q8N196 Y_RNA.676-201ENST00000516393 96 ntBASIC2.68□□□□□ -1.98
SIX5Q8N196 AC005336.3-201ENST00000623833 2679 ntBASIC2.68□□□□□ -1.98
SIX5Q8N196 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SIX5Q8N196 RNU6-1099P-201ENST00000363533 107 ntBASIC2.67□□□□□ -1.98
SIX5Q8N196 RNU6-203P-201ENST00000384038 104 ntBASIC2.67□□□□□ -1.98
SIX5Q8N196 RNU6-482P-201ENST00000391068 107 ntBASIC2.67□□□□□ -1.98
SIX5Q8N196 RN7SKP223-201ENST00000410582 62 ntBASIC2.67□□□□□ -1.98
SIX5Q8N196 AC234781.5-201ENST00000508429 271 ntBASIC2.67□□□□□ -1.98
SIX5Q8N196 RNA5SP282-201ENST00000516355 108 ntBASIC2.67□□□□□ -1.98
SIX5Q8N196 U4.3-201ENST00000621047 82 ntBASIC2.67□□□□□ -1.98
SIX5Q8N196 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SIX5Q8N196 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SIX5Q8N196 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX5Q8N196 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX5Q8N196 CYP3A52P-201ENST00000563326 91 ntBASIC2.66□□□□□ -1.98
SIX5Q8N196 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SIX5Q8N196 RNU6-832P-201ENST00000363319 107 ntBASIC2.65□□□□□ -1.99
SIX5Q8N196 RNA5SP259-201ENST00000365541 109 ntBASIC2.65□□□□□ -1.99
SIX5Q8N196 MIR488-201ENST00000365739 83 ntBASIC2.65□□□□□ -1.99
SIX5Q8N196 MIR27B-201ENST00000385129 97 ntBASIC2.65□□□□□ -1.99
SIX5Q8N196 MIR577-201ENST00000385196 96 ntBASIC2.65□□□□□ -1.99
SIX5Q8N196 AL451046.2-201ENST00000403074 277 ntBASIC2.65□□□□□ -1.99
SIX5Q8N196 AC004965.1-201ENST00000413033 213 ntBASIC2.65□□□□□ -1.99
SIX5Q8N196 AL603825.1-201ENST00000438481 80 ntBASIC2.65□□□□□ -1.99
SIX5Q8N196 AC245047.7-201ENST00000440265 293 ntBASIC2.65□□□□□ -1.99
SIX5Q8N196 RNU6-548P-201ENST00000517083 115 ntBASIC2.65□□□□□ -1.99
SIX5Q8N196 MIR3605-201ENST00000583214 100 ntBASIC2.65□□□□□ -1.99
SIX5Q8N196 MALAT1.1-201ENST00000618249 95 ntBASIC2.65□□□□□ -1.99
SIX5Q8N196 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SIX5Q8N196 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
SIX5Q8N196 RNA5SP276-201ENST00000362580 94 ntBASIC2.64□□□□□ -1.99
SIX5Q8N196 RNA5SP99-201ENST00000364020 114 ntBASIC2.64□□□□□ -1.99
SIX5Q8N196 MIR605-201ENST00000385078 83 ntBASIC2.64□□□□□ -1.99
SIX5Q8N196 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX5Q8N196 RPS29P6-201ENST00000438196 145 ntBASIC2.64□□□□□ -1.99
SIX5Q8N196 AC055731.1-201ENST00000474387 401 ntBASIC2.64□□□□□ -1.99
SIX5Q8N196 MIR4635-201ENST00000583759 79 ntBASIC2.64□□□□□ -1.99
SIX5Q8N196 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SIX5Q8N196 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SIX5Q8N196 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SIX5Q8N196 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SIX5Q8N196 SNORD73B-201ENST00000364394 72 ntBASIC2.63□□□□□ -1.99
SIX5Q8N196 SNORA18-201ENST00000384416 132 ntBASIC2.63□□□□□ -1.99
SIX5Q8N196 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.63□□□□□ -1.99
SIX5Q8N196 AC011753.1-201ENST00000451001 220 ntBASIC2.63□□□□□ -1.99
SIX5Q8N196 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.63□□□□□ -1.99
SIX5Q8N196 AL512310.12-203ENST00000640543 90 ntBASIC2.63□□□□□ -1.99
SIX5Q8N196 RNA5SP212-201ENST00000391223 107 ntBASIC2.62□□□□□ -1.99
SIX5Q8N196 RNU6-521P-201ENST00000516663 105 ntBASIC2.62□□□□□ -1.99
SIX5Q8N196 MIR8055-201ENST00000610739 97 ntBASIC2.62□□□□□ -1.99
SIX5Q8N196 MIR4251-201ENST00000635819 61 ntBASIC2.62□□□□□ -1.99
SIX5Q8N196 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SIX5Q8N196 SNORD45B-201ENST00000364617 72 ntBASIC2.61□□□□□ -1.99
SIX5Q8N196 MIR513A1-201ENST00000385138 129 ntBASIC2.61□□□□□ -1.99
SIX5Q8N196 RNU6-679P-201ENST00000391003 106 ntBASIC2.61□□□□□ -1.99
SIX5Q8N196 AL356320.1-201ENST00000429616 163 ntBASIC2.61□□□□□ -1.99
SIX5Q8N196 RNU6-1018P-201ENST00000516577 106 ntBASIC2.61□□□□□ -1.99
SIX5Q8N196 RNA5SP82-201ENST00000516707 92 ntBASIC2.61□□□□□ -1.99
SIX5Q8N196 AC096720.1-201ENST00000604441 183 ntBASIC2.61□□□□□ -1.99
SIX5Q8N196 AL442128.1-201ENST00000615151 90 ntBASIC2.61□□□□□ -1.99
SIX5Q8N196 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SIX5Q8N196 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SIX5Q8N196 Y_RNA.96-201ENST00000363092 109 ntBASIC2.6□□□□□ -1.99
SIX5Q8N196 RNY1P7-201ENST00000384743 110 ntBASIC2.6□□□□□ -1.99
SIX5Q8N196 MIR194-1-201ENST00000384892 85 ntBASIC2.6□□□□□ -1.99
SIX5Q8N196 Y_RNA.659-201ENST00000515994 113 ntBASIC2.6□□□□□ -1.99
SIX5Q8N196 RNU6-844P-201ENST00000517175 102 ntBASIC2.6□□□□□ -1.99
SIX5Q8N196 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.6□□□□□ -1.99
SIX5Q8N196 Z97988.1-201ENST00000637697 135 ntBASIC2.6□□□□□ -1.99
SIX5Q8N196 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
SIX5Q8N196 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SIX5Q8N196 Y_RNA.342-201ENST00000365352 113 ntBASIC2.59□□□□□ -1.99
SIX5Q8N196 Y_RNA.466-201ENST00000384294 113 ntBASIC2.59□□□□□ -1.99
SIX5Q8N196 JTBP1-201ENST00000441314 247 ntBASIC2.59□□□□□ -1.99
SIX5Q8N196 MIR1270-201ENST00000459320 83 ntBASIC2.59□□□□□ -1.99
SIX5Q8N196 MIR3935-201ENST00000583472 104 ntBASIC2.59□□□□□ -1.99
SIX5Q8N196 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.59□□□□□ -1.99
SIX5Q8N196 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
SIX5Q8N196 RNU6-170P-201ENST00000362832 104 ntBASIC2.58□□□□□ -2
SIX5Q8N196 SNORA16B-201ENST00000364674 135 ntBASIC2.58□□□□□ -2
SIX5Q8N196 RNU6-342P-201ENST00000384521 104 ntBASIC2.58□□□□□ -2
SIX5Q8N196 MIR653-201ENST00000385279 96 ntBASIC2.58□□□□□ -2
SIX5Q8N196 SNORA26.2-201ENST00000390922 122 ntBASIC2.58□□□□□ -2
SIX5Q8N196 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.58□□□□□ -2
SIX5Q8N196 AC004941.2-201ENST00000427009 228 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms