Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR5004-201ENST00000579078 107 ntBASIC2.86□□□□□ -1.95
CCDC116Q8IYX3 MIR6852-201ENST00000621699 66 ntBASIC2.86□□□□□ -1.95
CCDC116Q8IYX3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC116Q8IYX3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CCDC116Q8IYX3 RNU6-296P-201ENST00000384608 107 ntBASIC2.85□□□□□ -1.95
CCDC116Q8IYX3 RNU6-1237P-201ENST00000384777 107 ntBASIC2.85□□□□□ -1.95
CCDC116Q8IYX3 SNORA48.1-201ENST00000390879 135 ntBASIC2.85□□□□□ -1.95
CCDC116Q8IYX3 RNA5SP465-201ENST00000391195 109 ntBASIC2.85□□□□□ -1.95
CCDC116Q8IYX3 AL023284.1-201ENST00000403956 276 ntBASIC2.85□□□□□ -1.95
CCDC116Q8IYX3 UBE2DNL-203ENST00000474922 222 ntBASIC2.85□□□□□ -1.95
CCDC116Q8IYX3 MIR4764-201ENST00000580680 88 ntBASIC2.85□□□□□ -1.95
CCDC116Q8IYX3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC116Q8IYX3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC116Q8IYX3 RNU6-315P-201ENST00000362666 107 ntBASIC2.84□□□□□ -1.95
CCDC116Q8IYX3 RNU6-112P-201ENST00000363599 104 ntBASIC2.84□□□□□ -1.95
CCDC116Q8IYX3 AC087499.7-201ENST00000441958 109 ntBASIC2.84□□□□□ -1.95
CCDC116Q8IYX3 RN7SL75P-201ENST00000461926 281 ntBASIC2.84□□□□□ -1.95
CCDC116Q8IYX3 AC008885.1-201ENST00000514930 301 ntBASIC2.84□□□□□ -1.95
CCDC116Q8IYX3 RNA5SP481-201ENST00000516814 122 ntBASIC2.84□□□□□ -1.95
CCDC116Q8IYX3 AC007318.2-201ENST00000620999 243 ntBASIC2.84□□□□□ -1.95
CCDC116Q8IYX3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC116Q8IYX3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.84□□□□□ -1.96
CCDC116Q8IYX3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC116Q8IYX3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.84□□□□□ -1.96
CCDC116Q8IYX3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
CCDC116Q8IYX3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 MIR424-201ENST00000362227 98 ntBASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 SNORA71.1-201ENST00000364523 117 ntBASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 RNY1P13-201ENST00000365030 105 ntBASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 SNORA48.2-201ENST00000390926 124 ntBASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 RNU7-26P-201ENST00000458980 63 ntBASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 RN7SL633P-201ENST00000488974 297 ntBASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 RNU7-153P-201ENST00000516455 62 ntBASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 U7.4-201ENST00000614961 63 ntBASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 AL035425.3-201ENST00000564206 4996 ntBASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 AC093831.2-201ENST00000624393 3427 ntBASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
CCDC116Q8IYX3 AC073325.2-201ENST00000339545 159 ntBASIC2.82□□□□□ -1.96
CCDC116Q8IYX3 MIR518A2-201ENST00000384966 87 ntBASIC2.82□□□□□ -1.96
CCDC116Q8IYX3 AC011753.1-201ENST00000451001 220 ntBASIC2.82□□□□□ -1.96
CCDC116Q8IYX3 MIR548AO-201ENST00000579992 96 ntBASIC2.82□□□□□ -1.96
CCDC116Q8IYX3 MIR5194-201ENST00000582634 120 ntBASIC2.82□□□□□ -1.96
CCDC116Q8IYX3 AL365361.1-201ENST00000566942 3481 ntBASIC2.82□□□□□ -1.96
CCDC116Q8IYX3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CCDC116Q8IYX3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 HSBP1P2-201ENST00000299671 229 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 RNA5SP374-201ENST00000362939 125 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 RNA5SP133-201ENST00000363368 119 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 RNA5SP393-201ENST00000363423 117 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 SNORA54-201ENST00000384281 123 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 MIR128-1-201ENST00000384921 82 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 RNU6-129P-201ENST00000391022 107 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 MIR1236-201ENST00000408340 102 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 AC090255.1-201ENST00000495779 349 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 SNORA25.13-201ENST00000516395 103 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 AC133485.1-201ENST00000567176 124 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 FO624990.1-201ENST00000636373 85 ntBASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC116Q8IYX3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC116Q8IYX3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC116Q8IYX3 MIR520C-201ENST00000385005 87 ntBASIC2.8□□□□□ -1.96
CCDC116Q8IYX3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC116Q8IYX3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.8□□□□□ -1.96
CCDC116Q8IYX3 RNA5SP501-201ENST00000410990 112 ntBASIC2.8□□□□□ -1.96
CCDC116Q8IYX3 AP006437.1-201ENST00000641440 3685 ntBASIC2.8□□□□□ -1.96
CCDC116Q8IYX3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CCDC116Q8IYX3 RNU4-32P-201ENST00000363404 141 ntBASIC2.79□□□□□ -1.96
CCDC116Q8IYX3 Y_RNA.545-201ENST00000384652 105 ntBASIC2.79□□□□□ -1.96
CCDC116Q8IYX3 SNORD38B-201ENST00000384690 67 ntBASIC2.79□□□□□ -1.96
CCDC116Q8IYX3 AC019129.1-201ENST00000403786 261 ntBASIC2.79□□□□□ -1.96
CCDC116Q8IYX3 RNA5SP237-201ENST00000410414 113 ntBASIC2.79□□□□□ -1.96
CCDC116Q8IYX3 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.79□□□□□ -1.96
CCDC116Q8IYX3 SNORD38B-202ENST00000625943 69 ntBASIC2.79□□□□□ -1.96
CCDC116Q8IYX3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC116Q8IYX3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 MIR422A-201ENST00000362286 90 ntBASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 RNU6-478P-201ENST00000363904 110 ntBASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 SNORD4B-201ENST00000459083 72 ntBASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 RPS29P11-201ENST00000496507 171 ntBASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 RNU6-917P-201ENST00000516294 104 ntBASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 AC141846.1-201ENST00000568348 142 ntBASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 MIR4446-201ENST00000578505 67 ntBASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 MIR8066-201ENST00000617280 78 ntBASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 MIR8057-201ENST00000620957 69 ntBASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC116Q8IYX3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.77□□□□□ -1.97
CCDC116Q8IYX3 AC022018.1-201ENST00000430685 241 ntBASIC2.77□□□□□ -1.97
CCDC116Q8IYX3 AC105272.1-201ENST00000438604 198 ntBASIC2.77□□□□□ -1.97
CCDC116Q8IYX3 AC027119.1-201ENST00000440877 241 ntBASIC2.77□□□□□ -1.97
CCDC116Q8IYX3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC116Q8IYX3 AL162274.2-201ENST00000614406 332 ntBASIC2.77□□□□□ -1.97
CCDC116Q8IYX3 MIR4251-201ENST00000635819 61 ntBASIC2.77□□□□□ -1.97
CCDC116Q8IYX3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC116Q8IYX3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC116Q8IYX3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 213.3 ms