Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RETREG3Q86VR2 RNU6-1123P-201ENST00000362347 106 ntBASIC2.91□□□□□ -1.94
RETREG3Q86VR2 RNA5SP274-201ENST00000410484 108 ntBASIC2.91□□□□□ -1.94
RETREG3Q86VR2 RPS29P11-201ENST00000496507 171 ntBASIC2.91□□□□□ -1.94
RETREG3Q86VR2 AC140658.3-201ENST00000567603 271 ntBASIC2.91□□□□□ -1.94
RETREG3Q86VR2 AC007318.2-201ENST00000620999 243 ntBASIC2.91□□□□□ -1.94
RETREG3Q86VR2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.91□□□□□ -1.94
RETREG3Q86VR2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
RETREG3Q86VR2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RETREG3Q86VR2 RNVU1-14-201ENST00000384770 164 ntBASIC2.9□□□□□ -1.95
RETREG3Q86VR2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RETREG3Q86VR2 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.95
RETREG3Q86VR2 RNA5SP100-201ENST00000410903 110 ntBASIC2.9□□□□□ -1.95
RETREG3Q86VR2 RNA5SP59-201ENST00000410922 110 ntBASIC2.9□□□□□ -1.95
RETREG3Q86VR2 RNU6-322P-201ENST00000516010 103 ntBASIC2.9□□□□□ -1.95
RETREG3Q86VR2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.9□□□□□ -1.95
RETREG3Q86VR2 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.9□□□□□ -1.95
RETREG3Q86VR2 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.9□□□□□ -1.95
RETREG3Q86VR2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
RETREG3Q86VR2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
RETREG3Q86VR2 HSBP1P2-201ENST00000299671 229 ntBASIC2.89□□□□□ -1.95
RETREG3Q86VR2 RNU1-33P-201ENST00000364249 162 ntBASIC2.89□□□□□ -1.95
RETREG3Q86VR2 SNORA31.17-201ENST00000516953 127 ntBASIC2.89□□□□□ -1.95
RETREG3Q86VR2 DEFB122-202ENST00000569013 197 ntBASIC2.89□□□□□ -1.95
RETREG3Q86VR2 AL662814.1-201ENST00000617364 121 ntBASIC2.89□□□□□ -1.95
RETREG3Q86VR2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RETREG3Q86VR2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RETREG3Q86VR2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
RETREG3Q86VR2 SNORA38.1-201ENST00000364172 131 ntBASIC2.88□□□□□ -1.95
RETREG3Q86VR2 SNORA7.4-201ENST00000384249 137 ntBASIC2.88□□□□□ -1.95
RETREG3Q86VR2 MIR491-201ENST00000384877 84 ntBASIC2.88□□□□□ -1.95
RETREG3Q86VR2 MIR483-201ENST00000385070 76 ntBASIC2.88□□□□□ -1.95
RETREG3Q86VR2 RNU6-360P-201ENST00000390944 104 ntBASIC2.88□□□□□ -1.95
RETREG3Q86VR2 RNA5SP492-201ENST00000411330 114 ntBASIC2.88□□□□□ -1.95
RETREG3Q86VR2 RNU7-41P-201ENST00000515917 61 ntBASIC2.88□□□□□ -1.95
RETREG3Q86VR2 AP000753.3-201ENST00000604083 169 ntBASIC2.88□□□□□ -1.95
RETREG3Q86VR2 AL161756.2-201ENST00000604597 246 ntBASIC2.88□□□□□ -1.95
RETREG3Q86VR2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.88□□□□□ -1.95
RETREG3Q86VR2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RETREG3Q86VR2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.87□□□□□ -1.95
RETREG3Q86VR2 MIR1236-201ENST00000408340 102 ntBASIC2.87□□□□□ -1.95
RETREG3Q86VR2 BX510359.1-201ENST00000456973 237 ntBASIC2.87□□□□□ -1.95
RETREG3Q86VR2 UBL5P2-201ENST00000583788 219 ntBASIC2.87□□□□□ -1.95
RETREG3Q86VR2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.87□□□□□ -1.95
RETREG3Q86VR2 MIR8066-201ENST00000617280 78 ntBASIC2.87□□□□□ -1.95
RETREG3Q86VR2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.87□□□□□ -1.95
RETREG3Q86VR2 RNA5SP133-201ENST00000363368 119 ntBASIC2.86□□□□□ -1.95
RETREG3Q86VR2 RNU6-525P-201ENST00000363685 104 ntBASIC2.86□□□□□ -1.95
RETREG3Q86VR2 RNY1P2-201ENST00000364820 117 ntBASIC2.86□□□□□ -1.95
RETREG3Q86VR2 SNORD15B-201ENST00000384714 146 ntBASIC2.86□□□□□ -1.95
RETREG3Q86VR2 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.86□□□□□ -1.95
RETREG3Q86VR2 AC087499.7-201ENST00000441958 109 ntBASIC2.86□□□□□ -1.95
RETREG3Q86VR2 RNU7-153P-201ENST00000516455 62 ntBASIC2.86□□□□□ -1.95
RETREG3Q86VR2 AC090897.1-201ENST00000580909 226 ntBASIC2.86□□□□□ -1.95
RETREG3Q86VR2 AC145423.2-201ENST00000610631 239 ntBASIC2.86□□□□□ -1.95
RETREG3Q86VR2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RETREG3Q86VR2 AL161431.1-201ENST00000618966 4205 ntBASIC2.86□□□□□ -1.95
RETREG3Q86VR2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.86□□□□□ -1.95
RETREG3Q86VR2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.85□□□□□ -1.95
RETREG3Q86VR2 RNU4-32P-201ENST00000363404 141 ntBASIC2.85□□□□□ -1.95
RETREG3Q86VR2 RNU6-203P-201ENST00000384038 104 ntBASIC2.85□□□□□ -1.95
RETREG3Q86VR2 Y_RNA.565-201ENST00000384719 101 ntBASIC2.85□□□□□ -1.95
RETREG3Q86VR2 RNA5SP120-201ENST00000410900 112 ntBASIC2.85□□□□□ -1.95
RETREG3Q86VR2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.85□□□□□ -1.95
RETREG3Q86VR2 AC009474.2-201ENST00000451383 136 ntBASIC2.85□□□□□ -1.95
RETREG3Q86VR2 RN7SL863P-201ENST00000462370 296 ntBASIC2.85□□□□□ -1.95
RETREG3Q86VR2 RN7SKP57-201ENST00000517248 293 ntBASIC2.85□□□□□ -1.95
RETREG3Q86VR2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.85□□□□□ -1.95
RETREG3Q86VR2 MIR6733-201ENST00000635723 61 ntBASIC2.85□□□□□ -1.95
RETREG3Q86VR2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
RETREG3Q86VR2 AL035425.3-201ENST00000564206 4996 ntBASIC2.84□□□□□ -1.95
RETREG3Q86VR2 RNU6-949P-201ENST00000384040 107 ntBASIC2.84□□□□□ -1.95
RETREG3Q86VR2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.84□□□□□ -1.95
RETREG3Q86VR2 RPS27P21-201ENST00000486977 252 ntBASIC2.84□□□□□ -1.95
RETREG3Q86VR2 RNA5SP445-201ENST00000515889 115 ntBASIC2.84□□□□□ -1.95
RETREG3Q86VR2 SNORA31.15-201ENST00000516771 132 ntBASIC2.84□□□□□ -1.95
RETREG3Q86VR2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.84□□□□□ -1.95
RETREG3Q86VR2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RETREG3Q86VR2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RETREG3Q86VR2 RNU6-315P-201ENST00000362666 107 ntBASIC2.83□□□□□ -1.96
RETREG3Q86VR2 Y_RNA.57-201ENST00000362806 113 ntBASIC2.83□□□□□ -1.96
RETREG3Q86VR2 RNU6-1229P-201ENST00000364295 107 ntBASIC2.83□□□□□ -1.96
RETREG3Q86VR2 RNU6-129P-201ENST00000391022 107 ntBASIC2.83□□□□□ -1.96
RETREG3Q86VR2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.83□□□□□ -1.96
RETREG3Q86VR2 AC005326.1-201ENST00000429197 123 ntBASIC2.83□□□□□ -1.96
RETREG3Q86VR2 AC003982.1-202ENST00000469928 248 ntBASIC2.83□□□□□ -1.96
RETREG3Q86VR2 SNORA25.13-201ENST00000516395 103 ntBASIC2.83□□□□□ -1.96
RETREG3Q86VR2 SNORD111.1-201ENST00000516421 86 ntBASIC2.83□□□□□ -1.96
RETREG3Q86VR2 MIR622-201ENST00000638396 96 ntBASIC2.83□□□□□ -1.96
RETREG3Q86VR2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.83□□□□□ -1.96
RETREG3Q86VR2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RETREG3Q86VR2 AC131280.1-202ENST00000624067 4211 ntBASIC2.83□□□□□ -1.96
RETREG3Q86VR2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RETREG3Q86VR2 RNA5SP48-201ENST00000363969 126 ntBASIC2.82□□□□□ -1.96
RETREG3Q86VR2 SNORA9-201ENST00000384215 133 ntBASIC2.82□□□□□ -1.96
RETREG3Q86VR2 SNORA54-201ENST00000384281 123 ntBASIC2.82□□□□□ -1.96
RETREG3Q86VR2 MIR653-201ENST00000385279 96 ntBASIC2.82□□□□□ -1.96
RETREG3Q86VR2 RNU6-788P-201ENST00000390967 104 ntBASIC2.82□□□□□ -1.96
RETREG3Q86VR2 SNORD88.1-201ENST00000408684 91 ntBASIC2.82□□□□□ -1.96
RETREG3Q86VR2 RNA5SP450-201ENST00000411206 102 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms