Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 RNA5SP458-201ENST00000516188 119 ntBASIC1.76□□□□□ -2.13
LRRTM3Q86VH5 Y_RNA.757-201ENST00000578934 114 ntBASIC1.76□□□□□ -2.13
LRRTM3Q86VH5 MIR4303-201ENST00000581299 66 ntBASIC1.76□□□□□ -2.13
LRRTM3Q86VH5 U7.2-201ENST00000607576 63 ntBASIC1.76□□□□□ -2.13
LRRTM3Q86VH5 AC011603.4-201ENST00000611325 277 ntBASIC1.76□□□□□ -2.13
LRRTM3Q86VH5 TUG1_4.1-201ENST00000619464 181 ntBASIC1.76□□□□□ -2.13
LRRTM3Q86VH5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
LRRTM3Q86VH5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LRRTM3Q86VH5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
LRRTM3Q86VH5 RNA5SP261-201ENST00000410536 106 ntBASIC1.75□□□□□ -2.13
LRRTM3Q86VH5 CYP3A52P-201ENST00000563326 91 ntBASIC1.75□□□□□ -2.13
LRRTM3Q86VH5 MIR3618-201ENST00000580330 88 ntBASIC1.75□□□□□ -2.13
LRRTM3Q86VH5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LRRTM3Q86VH5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LRRTM3Q86VH5 RNY1P6-201ENST00000384193 109 ntBASIC1.74□□□□□ -2.13
LRRTM3Q86VH5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.74□□□□□ -2.13
LRRTM3Q86VH5 RNU6-970P-201ENST00000516312 107 ntBASIC1.74□□□□□ -2.13
LRRTM3Q86VH5 RNU6-113P-201ENST00000516653 101 ntBASIC1.74□□□□□ -2.13
LRRTM3Q86VH5 DNAJC19P9-201ENST00000555084 351 ntBASIC1.74□□□□□ -2.13
LRRTM3Q86VH5 AL022345.2-201ENST00000606307 135 ntBASIC1.74□□□□□ -2.13
LRRTM3Q86VH5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LRRTM3Q86VH5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LRRTM3Q86VH5 RNU6-309P-201ENST00000364573 106 ntBASIC1.73□□□□□ -2.13
LRRTM3Q86VH5 RNU4-62P-201ENST00000410125 130 ntBASIC1.73□□□□□ -2.13
LRRTM3Q86VH5 RNU6-257P-201ENST00000410238 98 ntBASIC1.73□□□□□ -2.13
LRRTM3Q86VH5 MTND4LP9-201ENST00000427694 174 ntBASIC1.73□□□□□ -2.13
LRRTM3Q86VH5 AC009474.2-201ENST00000451383 136 ntBASIC1.73□□□□□ -2.13
LRRTM3Q86VH5 RNU5E-3P-201ENST00000515913 68 ntBASIC1.73□□□□□ -2.13
LRRTM3Q86VH5 MIR8065-201ENST00000620577 100 ntBASIC1.73□□□□□ -2.13
LRRTM3Q86VH5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LRRTM3Q86VH5 RNU6-913P-201ENST00000390913 95 ntBASIC1.72□□□□□ -2.13
LRRTM3Q86VH5 RNU6-1054P-201ENST00000411293 104 ntBASIC1.72□□□□□ -2.13
LRRTM3Q86VH5 TMSB4XP3-201ENST00000445144 114 ntBASIC1.72□□□□□ -2.13
LRRTM3Q86VH5 MIR3152-201ENST00000579801 74 ntBASIC1.72□□□□□ -2.13
LRRTM3Q86VH5 AL020996.3-201ENST00000606617 222 ntBASIC1.72□□□□□ -2.13
LRRTM3Q86VH5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.72□□□□□ -2.13
LRRTM3Q86VH5 SNORA67.5-201ENST00000391036 107 ntBASIC1.71□□□□□ -2.14
LRRTM3Q86VH5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.71□□□□□ -2.14
LRRTM3Q86VH5 MIR548AO-201ENST00000579992 96 ntBASIC1.71□□□□□ -2.14
LRRTM3Q86VH5 AL645939.4-201ENST00000604495 135 ntBASIC1.71□□□□□ -2.14
LRRTM3Q86VH5 SNORA25.3-201ENST00000363205 127 ntBASIC1.7□□□□□ -2.14
LRRTM3Q86VH5 RNU6-690P-201ENST00000365242 106 ntBASIC1.7□□□□□ -2.14
LRRTM3Q86VH5 MIR539-201ENST00000365690 78 ntBASIC1.7□□□□□ -2.14
LRRTM3Q86VH5 Y_RNA.586-201ENST00000391146 98 ntBASIC1.7□□□□□ -2.14
LRRTM3Q86VH5 BTF3P4-201ENST00000418852 495 ntBASIC1.7□□□□□ -2.14
LRRTM3Q86VH5 AC245047.7-201ENST00000440265 293 ntBASIC1.7□□□□□ -2.14
LRRTM3Q86VH5 MIR3121-201ENST00000579680 77 ntBASIC1.7□□□□□ -2.14
LRRTM3Q86VH5 RNA5SP264-201ENST00000363115 107 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 SNORA1.1-201ENST00000364671 133 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 RNU6-1319P-201ENST00000390855 104 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 RNU6-747P-201ENST00000390928 104 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 RNU6-241P-201ENST00000391148 104 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 RNU6-177P-201ENST00000411257 104 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 snoU13.25-201ENST00000458945 104 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 Y_RNA.651-201ENST00000459380 103 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 SNORA31.2-201ENST00000516019 134 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 SNORA31.4-201ENST00000516049 129 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 RNU11-2P-201ENST00000516898 142 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 MIR8055-201ENST00000610739 97 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 AC021613.1-201ENST00000623880 111 ntBASIC1.69□□□□□ -2.14
LRRTM3Q86VH5 MIR103A2-201ENST00000362154 78 ntBASIC1.68□□□□□ -2.14
LRRTM3Q86VH5 RNU6-349P-201ENST00000362402 107 ntBASIC1.68□□□□□ -2.14
LRRTM3Q86VH5 RNU1-42P-201ENST00000364033 160 ntBASIC1.68□□□□□ -2.14
LRRTM3Q86VH5 RNU6-997P-201ENST00000384725 107 ntBASIC1.68□□□□□ -2.14
LRRTM3Q86VH5 RNU6-893P-201ENST00000458841 100 ntBASIC1.68□□□□□ -2.14
LRRTM3Q86VH5 AC048334.1-201ENST00000477975 159 ntBASIC1.68□□□□□ -2.14
LRRTM3Q86VH5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.68□□□□□ -2.14
LRRTM3Q86VH5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
LRRTM3Q86VH5 RNU6-508P-201ENST00000363231 103 ntBASIC1.67□□□□□ -2.14
LRRTM3Q86VH5 RNU6-60P-201ENST00000364792 103 ntBASIC1.67□□□□□ -2.14
LRRTM3Q86VH5 RNU6-396P-201ENST00000365369 105 ntBASIC1.67□□□□□ -2.14
LRRTM3Q86VH5 RPS3AP1-201ENST00000413190 320 ntBASIC1.67□□□□□ -2.14
LRRTM3Q86VH5 AP1B1P2-201ENST00000416196 106 ntBASIC1.67□□□□□ -2.14
LRRTM3Q86VH5 RNU7-45P-201ENST00000459460 63 ntBASIC1.67□□□□□ -2.14
LRRTM3Q86VH5 AP003716.2-201ENST00000528260 108 ntBASIC1.67□□□□□ -2.14
LRRTM3Q86VH5 MIR6717-201ENST00000622747 73 ntBASIC1.67□□□□□ -2.14
LRRTM3Q86VH5 Z97988.1-201ENST00000637697 135 ntBASIC1.67□□□□□ -2.14
LRRTM3Q86VH5 Y_RNA.114-201ENST00000363265 113 ntBASIC1.66□□□□□ -2.14
LRRTM3Q86VH5 RNU6-647P-201ENST00000364243 107 ntBASIC1.66□□□□□ -2.14
LRRTM3Q86VH5 RNU4-16P-201ENST00000364737 141 ntBASIC1.66□□□□□ -2.14
LRRTM3Q86VH5 MIR1323-201ENST00000408090 73 ntBASIC1.66□□□□□ -2.14
LRRTM3Q86VH5 HMGN1P33-201ENST00000432945 451 ntBASIC1.66□□□□□ -2.14
LRRTM3Q86VH5 RNU6-240P-201ENST00000516098 97 ntBASIC1.66□□□□□ -2.14
LRRTM3Q86VH5 AC133485.4-201ENST00000561835 220 ntBASIC1.66□□□□□ -2.14
LRRTM3Q86VH5 AC138907.4-201ENST00000570107 226 ntBASIC1.66□□□□□ -2.14
LRRTM3Q86VH5 AL161722.3-201ENST00000605789 2983 ntBASIC1.66□□□□□ -2.14
LRRTM3Q86VH5 MIR378A-201ENST00000362177 66 ntBASIC1.65□□□□□ -2.15
LRRTM3Q86VH5 Y_RNA.354-201ENST00000365448 111 ntBASIC1.65□□□□□ -2.15
LRRTM3Q86VH5 SNORD38B-201ENST00000384690 67 ntBASIC1.65□□□□□ -2.15
LRRTM3Q86VH5 SNORA26.6-201ENST00000391256 115 ntBASIC1.65□□□□□ -2.15
LRRTM3Q86VH5 RNU6-1190P-201ENST00000410811 104 ntBASIC1.65□□□□□ -2.15
LRRTM3Q86VH5 RNU4-61P-201ENST00000411243 107 ntBASIC1.65□□□□□ -2.15
LRRTM3Q86VH5 RNU6-1211P-201ENST00000459179 105 ntBASIC1.65□□□□□ -2.15
LRRTM3Q86VH5 MIR2115-201ENST00000516657 100 ntBASIC1.65□□□□□ -2.15
LRRTM3Q86VH5 HSPE1P19-201ENST00000603327 295 ntBASIC1.65□□□□□ -2.15
LRRTM3Q86VH5 PRELID3BP2-201ENST00000605362 201 ntBASIC1.65□□□□□ -2.15
LRRTM3Q86VH5 SNORD38B-202ENST00000625943 69 ntBASIC1.65□□□□□ -2.15
LRRTM3Q86VH5 Y_RNA.430-201ENST00000384081 110 ntBASIC1.64□□□□□ -2.15
LRRTM3Q86VH5 MIR1185-1-201ENST00000408598 86 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 265.6 ms