Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRAF7Q6Q0C0 MIRLET7F1-201ENST00000362202 87 ntBASIC3.41□□□□□ -1.86
TRAF7Q6Q0C0 SNORA25.5-201ENST00000363782 126 ntBASIC3.41□□□□□ -1.86
TRAF7Q6Q0C0 RNU6-424P-201ENST00000384367 105 ntBASIC3.41□□□□□ -1.86
TRAF7Q6Q0C0 SNORA72.6-201ENST00000384520 129 ntBASIC3.41□□□□□ -1.86
TRAF7Q6Q0C0 MIR548U-201ENST00000390728 81 ntBASIC3.41□□□□□ -1.86
TRAF7Q6Q0C0 RPS29P11-201ENST00000496507 171 ntBASIC3.41□□□□□ -1.86
TRAF7Q6Q0C0 RNA5SP356-201ENST00000515972 94 ntBASIC3.41□□□□□ -1.86
TRAF7Q6Q0C0 RNU6-1116P-201ENST00000517269 99 ntBASIC3.41□□□□□ -1.86
TRAF7Q6Q0C0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.41□□□□□ -1.86
TRAF7Q6Q0C0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.41□□□□□ -1.86
TRAF7Q6Q0C0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TRAF7Q6Q0C0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRAF7Q6Q0C0 RNU6-940P-201ENST00000363433 104 ntBASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 SNORA71.1-201ENST00000364523 117 ntBASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 SNORA24-201ENST00000384096 131 ntBASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 SNORA11.4-201ENST00000408823 129 ntBASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 AC015922.2-201ENST00000435593 184 ntBASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 RPS29P29-201ENST00000456396 171 ntBASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 RNU7-28P-201ENST00000516759 62 ntBASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 AP006437.1-201ENST00000641440 3685 ntBASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRAF7Q6Q0C0 RNU6-862P-201ENST00000362804 105 ntBASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 SNORA38-201ENST00000363946 132 ntBASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 RNY1P2-201ENST00000364820 117 ntBASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 Y_RNA.370-201ENST00000365589 108 ntBASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 SNORA70.7-201ENST00000384159 133 ntBASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 SNORD67-201ENST00000390833 111 ntBASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 RNA5SP482-201ENST00000391269 118 ntBASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 HMGN1P33-201ENST00000432945 451 ntBASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 SNRPGP12-201ENST00000449481 213 ntBASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 RN7SKP132-201ENST00000516001 208 ntBASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 RNU6-850P-201ENST00000516934 103 ntBASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 AC026271.5-201ENST00000577873 130 ntBASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.39□□□□□ -1.87
TRAF7Q6Q0C0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAF7Q6Q0C0 RNA5SP126-201ENST00000365092 109 ntBASIC3.38□□□□□ -1.87
TRAF7Q6Q0C0 SNORD15B-201ENST00000384714 146 ntBASIC3.38□□□□□ -1.87
TRAF7Q6Q0C0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.38□□□□□ -1.87
TRAF7Q6Q0C0 RNU7-73P-201ENST00000458743 63 ntBASIC3.38□□□□□ -1.87
TRAF7Q6Q0C0 RN7SL297P-201ENST00000483161 293 ntBASIC3.38□□□□□ -1.87
TRAF7Q6Q0C0 MIR3162-201ENST00000581818 82 ntBASIC3.38□□□□□ -1.87
TRAF7Q6Q0C0 AP000753.3-201ENST00000604083 169 ntBASIC3.38□□□□□ -1.87
TRAF7Q6Q0C0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAF7Q6Q0C0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.38□□□□□ -1.87
TRAF7Q6Q0C0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAF7Q6Q0C0 AL161722.3-201ENST00000605789 2983 ntBASIC3.38□□□□□ -1.87
TRAF7Q6Q0C0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 AC073325.2-201ENST00000339545 159 ntBASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 MIR30E-201ENST00000362104 92 ntBASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 MIR449A-201ENST00000362113 91 ntBASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 Y_RNA.207-201ENST00000364142 106 ntBASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 Y_RNA.283-201ENST00000364798 112 ntBASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 RNU6-604P-201ENST00000390917 100 ntBASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 Y_RNA.606-201ENST00000410579 103 ntBASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 TRBV12-1-201ENST00000479785 344 ntBASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 SNORA74.3-201ENST00000517108 154 ntBASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 GTF3AP2-201ENST00000557014 266 ntBASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 AC090897.1-201ENST00000580909 226 ntBASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.37□□□□□ -1.87
TRAF7Q6Q0C0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 MIR22-201ENST00000362190 85 ntBASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 SNORD36A-201ENST00000362874 73 ntBASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 RNU6-23P-201ENST00000363283 107 ntBASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 RNA5SP493-201ENST00000364115 91 ntBASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 MIR660-201ENST00000385235 97 ntBASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 MIR518E-201ENST00000385252 88 ntBASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 AC245047.3-201ENST00000429428 127 ntBASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 SNORD92-201ENST00000585078 85 ntBASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.36□□□□□ -1.87
TRAF7Q6Q0C0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
TRAF7Q6Q0C0 SNORA1.2-201ENST00000365189 134 ntBASIC3.35□□□□□ -1.87
TRAF7Q6Q0C0 SNORA48.8-201ENST00000391324 134 ntBASIC3.35□□□□□ -1.87
TRAF7Q6Q0C0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.35□□□□□ -1.87
TRAF7Q6Q0C0 AC108938.1-201ENST00000451204 136 ntBASIC3.35□□□□□ -1.87
TRAF7Q6Q0C0 MIR3938-201ENST00000582157 103 ntBASIC3.35□□□□□ -1.87
TRAF7Q6Q0C0 AL357312.1-201ENST00000603879 298 ntBASIC3.35□□□□□ -1.87
TRAF7Q6Q0C0 MIR8065-201ENST00000620577 100 ntBASIC3.35□□□□□ -1.87
TRAF7Q6Q0C0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
TRAF7Q6Q0C0 ZNF209P-201ENST00000593450 2304 ntBASIC3.35□□□□□ -1.87
TRAF7Q6Q0C0 RNU6-1312P-201ENST00000362425 108 ntBASIC3.34□□□□□ -1.87
TRAF7Q6Q0C0 RNU6-1051P-201ENST00000365471 102 ntBASIC3.34□□□□□ -1.87
TRAF7Q6Q0C0 RNU6-301P-201ENST00000384277 107 ntBASIC3.34□□□□□ -1.87
TRAF7Q6Q0C0 RNU6-163P-201ENST00000384396 106 ntBASIC3.34□□□□□ -1.87
TRAF7Q6Q0C0 RPS27P29-201ENST00000463110 252 ntBASIC3.34□□□□□ -1.87
TRAF7Q6Q0C0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms