Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNA5SP492-201ENST00000411330 114 ntBASIC2.64□□□□□ -1.99
RNF43Q68DV7 RNA5SP320-201ENST00000516263 124 ntBASIC2.64□□□□□ -1.99
RNF43Q68DV7 SNORA31.10-201ENST00000516482 106 ntBASIC2.64□□□□□ -1.99
RNF43Q68DV7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.64□□□□□ -1.99
RNF43Q68DV7 MIR4648-201ENST00000580107 72 ntBASIC2.64□□□□□ -1.99
RNF43Q68DV7 SNORA28-201ENST00000606769 126 ntBASIC2.64□□□□□ -1.99
RNF43Q68DV7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF43Q68DV7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF43Q68DV7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RNF43Q68DV7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
RNF43Q68DV7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RNF43Q68DV7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RNF43Q68DV7 RNU6-633P-201ENST00000362612 103 ntBASIC2.63□□□□□ -1.99
RNF43Q68DV7 Y_RNA.316-201ENST00000365118 111 ntBASIC2.63□□□□□ -1.99
RNF43Q68DV7 Y_RNA.370-201ENST00000365589 108 ntBASIC2.63□□□□□ -1.99
RNF43Q68DV7 U8.16-201ENST00000391279 133 ntBASIC2.63□□□□□ -1.99
RNF43Q68DV7 AL591806.2-201ENST00000433122 173 ntBASIC2.63□□□□□ -1.99
RNF43Q68DV7 Z96811.1-201ENST00000445880 108 ntBASIC2.63□□□□□ -1.99
RNF43Q68DV7 RNU7-67P-201ENST00000459003 62 ntBASIC2.63□□□□□ -1.99
RNF43Q68DV7 MIR5092-201ENST00000583139 88 ntBASIC2.63□□□□□ -1.99
RNF43Q68DV7 AC022513.1-201ENST00000624512 117 ntBASIC2.63□□□□□ -1.99
RNF43Q68DV7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.63□□□□□ -1.99
RNF43Q68DV7 Z82195.2-201ENST00000612348 18351 ntBASIC2.62□□□□□ -1.99
RNF43Q68DV7 AC016717.2-201ENST00000609089 5141 ntBASIC2.62□□□□□ -1.99
RNF43Q68DV7 RNA5SP289-201ENST00000362332 137 ntBASIC2.62□□□□□ -1.99
RNF43Q68DV7 Y_RNA.94-201ENST00000363068 106 ntBASIC2.62□□□□□ -1.99
RNF43Q68DV7 RNU6-23P-201ENST00000363283 107 ntBASIC2.62□□□□□ -1.99
RNF43Q68DV7 RNU6-1163P-201ENST00000364516 107 ntBASIC2.62□□□□□ -1.99
RNF43Q68DV7 SNORA1.2-201ENST00000365189 134 ntBASIC2.62□□□□□ -1.99
RNF43Q68DV7 MIR516B2-201ENST00000385190 85 ntBASIC2.62□□□□□ -1.99
RNF43Q68DV7 MIR3616-201ENST00000584070 92 ntBASIC2.62□□□□□ -1.99
RNF43Q68DV7 MIR4791-201ENST00000607666 84 ntBASIC2.62□□□□□ -1.99
RNF43Q68DV7 MIR6717-201ENST00000622747 73 ntBASIC2.62□□□□□ -1.99
RNF43Q68DV7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RNF43Q68DV7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.61□□□□□ -1.99
RNF43Q68DV7 Y_RNA.140-201ENST00000363474 103 ntBASIC2.61□□□□□ -1.99
RNF43Q68DV7 SNORA70.7-201ENST00000384159 133 ntBASIC2.61□□□□□ -1.99
RNF43Q68DV7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RNF43Q68DV7 SNORA11.4-201ENST00000408823 129 ntBASIC2.61□□□□□ -1.99
RNF43Q68DV7 SNORA31.11-201ENST00000516528 139 ntBASIC2.61□□□□□ -1.99
RNF43Q68DV7 RNU7-53P-201ENST00000516705 60 ntBASIC2.61□□□□□ -1.99
RNF43Q68DV7 RNU6-1006P-201ENST00000516998 103 ntBASIC2.61□□□□□ -1.99
RNF43Q68DV7 SEPT14P17-201ENST00000617978 177 ntBASIC2.61□□□□□ -1.99
RNF43Q68DV7 AC005336.3-201ENST00000623833 2679 ntBASIC2.61□□□□□ -1.99
RNF43Q68DV7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF43Q68DV7 RNU6-833P-201ENST00000363486 107 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 MIR627-201ENST00000384979 97 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 MIR764-201ENST00000390811 85 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 RNU6-1307P-201ENST00000391012 103 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 MIR1289-2-201ENST00000408360 111 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 RNA5SP261-201ENST00000410536 106 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 HSPE1P9-201ENST00000440046 311 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 RPS29P29-201ENST00000456396 171 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 RNU7-2P-201ENST00000516096 62 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 RNA5SP168-201ENST00000516642 112 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 RNU6-548P-201ENST00000517083 115 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 U4.3-201ENST00000621047 82 ntBASIC2.6□□□□□ -1.99
RNF43Q68DV7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF43Q68DV7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.59□□□□□ -1.99
RNF43Q68DV7 SNORD38.1-201ENST00000363863 68 ntBASIC2.59□□□□□ -1.99
RNF43Q68DV7 RNA5SP456-201ENST00000364002 114 ntBASIC2.59□□□□□ -1.99
RNF43Q68DV7 SNORD114-30-201ENST00000364448 72 ntBASIC2.59□□□□□ -1.99
RNF43Q68DV7 RNU6-913P-201ENST00000390913 95 ntBASIC2.59□□□□□ -1.99
RNF43Q68DV7 RNU6-788P-201ENST00000390967 104 ntBASIC2.59□□□□□ -1.99
RNF43Q68DV7 AL603825.1-201ENST00000438481 80 ntBASIC2.59□□□□□ -1.99
RNF43Q68DV7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.59□□□□□ -2
RNF43Q68DV7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RNF43Q68DV7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RNF43Q68DV7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RNF43Q68DV7 SNORD115-3-201ENST00000363100 82 ntBASIC2.58□□□□□ -2
RNF43Q68DV7 SNORD115-27-201ENST00000364430 82 ntBASIC2.58□□□□□ -2
RNF43Q68DV7 RN7SKP223-201ENST00000410582 62 ntBASIC2.58□□□□□ -2
RNF43Q68DV7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.58□□□□□ -2
RNF43Q68DV7 UBBP3-201ENST00000445497 241 ntBASIC2.58□□□□□ -2
RNF43Q68DV7 RNU7-12P-201ENST00000516030 62 ntBASIC2.58□□□□□ -2
RNF43Q68DV7 AL020996.3-201ENST00000606617 222 ntBASIC2.58□□□□□ -2
RNF43Q68DV7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RNF43Q68DV7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.57□□□□□ -2
RNF43Q68DV7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.57□□□□□ -2
RNF43Q68DV7 MAPK10-266ENST00000641066 6555 ntBASIC2.57□□□□□ -2
RNF43Q68DV7 RNU1-109P-201ENST00000383960 147 ntBASIC2.57□□□□□ -2
RNF43Q68DV7 SNORA24-201ENST00000384096 131 ntBASIC2.57□□□□□ -2
RNF43Q68DV7 MIR206-201ENST00000384872 86 ntBASIC2.57□□□□□ -2
RNF43Q68DV7 AL359511.1-201ENST00000402970 211 ntBASIC2.57□□□□□ -2
RNF43Q68DV7 AL445685.2-201ENST00000422551 342 ntBASIC2.57□□□□□ -2
RNF43Q68DV7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.57□□□□□ -2
RNF43Q68DV7 AL049779.4-201ENST00000604500 156 ntBASIC2.57□□□□□ -2
RNF43Q68DV7 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
RNF43Q68DV7 AC080100.1-201ENST00000624239 5356 ntBASIC2.57□□□□□ -2
RNF43Q68DV7 RNA5SP99-201ENST00000364020 114 ntBASIC2.56□□□□□ -2
RNF43Q68DV7 RNU6-524P-201ENST00000384270 107 ntBASIC2.56□□□□□ -2
RNF43Q68DV7 MIR34C-201ENST00000384831 77 ntBASIC2.56□□□□□ -2
RNF43Q68DV7 SNORD28B-201ENST00000390993 75 ntBASIC2.56□□□□□ -2
RNF43Q68DV7 AL034345.1-201ENST00000407768 123 ntBASIC2.56□□□□□ -2
RNF43Q68DV7 RNA5SP247-201ENST00000411181 105 ntBASIC2.56□□□□□ -2
RNF43Q68DV7 RPS29P28-201ENST00000446439 141 ntBASIC2.56□□□□□ -2
RNF43Q68DV7 AC243994.1-201ENST00000618627 109 ntBASIC2.56□□□□□ -2
RNF43Q68DV7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
RNF43Q68DV7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms