Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRPF38BQ5VTL8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRPF38BQ5VTL8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.9
PRPF38BQ5VTL8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PRPF38BQ5VTL8 Y_RNA.430-201ENST00000384081 110 ntBASIC3.15□□□□□ -1.91
PRPF38BQ5VTL8 MIR526A1-201ENST00000384897 85 ntBASIC3.15□□□□□ -1.91
PRPF38BQ5VTL8 MIR27B-201ENST00000385129 97 ntBASIC3.15□□□□□ -1.91
PRPF38BQ5VTL8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PRPF38BQ5VTL8 SUB1P4-201ENST00000566062 339 ntBASIC3.15□□□□□ -1.91
PRPF38BQ5VTL8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.15□□□□□ -1.91
PRPF38BQ5VTL8 MIR4439-201ENST00000583746 80 ntBASIC3.15□□□□□ -1.91
PRPF38BQ5VTL8 MIR4658-201ENST00000584344 65 ntBASIC3.15□□□□□ -1.91
PRPF38BQ5VTL8 FAM106DP-201ENST00000586416 501 ntBASIC3.15□□□□□ -1.91
PRPF38BQ5VTL8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PRPF38BQ5VTL8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PRPF38BQ5VTL8 RNU6-509P-201ENST00000363519 107 ntBASIC3.14□□□□□ -1.91
PRPF38BQ5VTL8 RNU6-112P-201ENST00000363599 104 ntBASIC3.14□□□□□ -1.91
PRPF38BQ5VTL8 SNORA1.1-201ENST00000364671 133 ntBASIC3.14□□□□□ -1.91
PRPF38BQ5VTL8 RNA5SP501-201ENST00000410990 112 ntBASIC3.14□□□□□ -1.91
PRPF38BQ5VTL8 AL356320.1-201ENST00000429616 163 ntBASIC3.14□□□□□ -1.91
PRPF38BQ5VTL8 RPL23AP42-201ENST00000471152 471 ntBASIC3.14□□□□□ -1.91
PRPF38BQ5VTL8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.14□□□□□ -1.91
PRPF38BQ5VTL8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PRPF38BQ5VTL8 RNA5SP289-201ENST00000362332 137 ntBASIC3.13□□□□□ -1.91
PRPF38BQ5VTL8 Y_RNA.540-201ENST00000384638 111 ntBASIC3.13□□□□□ -1.91
PRPF38BQ5VTL8 HMGN2P39-201ENST00000398005 273 ntBASIC3.13□□□□□ -1.91
PRPF38BQ5VTL8 AC090844.1-201ENST00000422019 156 ntBASIC3.13□□□□□ -1.91
PRPF38BQ5VTL8 MIR2276-201ENST00000516886 89 ntBASIC3.13□□□□□ -1.91
PRPF38BQ5VTL8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.13□□□□□ -1.91
PRPF38BQ5VTL8 MIR376B-201ENST00000614515 100 ntBASIC3.13□□□□□ -1.91
PRPF38BQ5VTL8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRPF38BQ5VTL8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRPF38BQ5VTL8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRPF38BQ5VTL8 Y_RNA.247-201ENST00000364500 92 ntBASIC3.12□□□□□ -1.91
PRPF38BQ5VTL8 Y_RNA.537-201ENST00000384626 109 ntBASIC3.12□□□□□ -1.91
PRPF38BQ5VTL8 AL138827.1-201ENST00000402666 306 ntBASIC3.12□□□□□ -1.91
PRPF38BQ5VTL8 Y_RNA.607-201ENST00000410597 98 ntBASIC3.12□□□□□ -1.91
PRPF38BQ5VTL8 HMGN1P33-201ENST00000432945 451 ntBASIC3.12□□□□□ -1.91
PRPF38BQ5VTL8 RPL23AP6-201ENST00000446637 472 ntBASIC3.12□□□□□ -1.91
PRPF38BQ5VTL8 RN7SL442P-201ENST00000473804 320 ntBASIC3.12□□□□□ -1.91
PRPF38BQ5VTL8 MIR8070-201ENST00000616510 88 ntBASIC3.12□□□□□ -1.91
PRPF38BQ5VTL8 AC131280.1-202ENST00000624067 4211 ntBASIC3.12□□□□□ -1.91
PRPF38BQ5VTL8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF38BQ5VTL8 Y_RNA.94-201ENST00000363068 106 ntBASIC3.11□□□□□ -1.91
PRPF38BQ5VTL8 SNORA25.9-201ENST00000365087 128 ntBASIC3.11□□□□□ -1.91
PRPF38BQ5VTL8 RNU6-296P-201ENST00000384608 107 ntBASIC3.11□□□□□ -1.91
PRPF38BQ5VTL8 RNA5SP21-201ENST00000410917 96 ntBASIC3.11□□□□□ -1.91
PRPF38BQ5VTL8 RNA5SP270-201ENST00000411361 118 ntBASIC3.11□□□□□ -1.91
PRPF38BQ5VTL8 HMGN1P18-201ENST00000457642 277 ntBASIC3.11□□□□□ -1.91
PRPF38BQ5VTL8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF38BQ5VTL8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF38BQ5VTL8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 AC073325.2-201ENST00000339545 159 ntBASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 RNU6-633P-201ENST00000362612 103 ntBASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 RNU6-788P-201ENST00000390967 104 ntBASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 AC245047.7-201ENST00000440265 293 ntBASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 snoU13.16-201ENST00000459350 104 ntBASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 UBL5P1-201ENST00000507979 193 ntBASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 AC103810.7-201ENST00000607821 91 ntBASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRPF38BQ5VTL8 Y_RNA.316-201ENST00000365118 111 ntBASIC3.09□□□□□ -1.91
PRPF38BQ5VTL8 RNU1-51P-201ENST00000365345 176 ntBASIC3.09□□□□□ -1.91
PRPF38BQ5VTL8 MIR889-201ENST00000401280 79 ntBASIC3.09□□□□□ -1.91
PRPF38BQ5VTL8 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.09□□□□□ -1.91
PRPF38BQ5VTL8 AC099513.1-201ENST00000490423 301 ntBASIC3.09□□□□□ -1.91
PRPF38BQ5VTL8 RNU6-1006P-201ENST00000516998 103 ntBASIC3.09□□□□□ -1.91
PRPF38BQ5VTL8 MIR1273D-201ENST00000577266 86 ntBASIC3.09□□□□□ -1.91
PRPF38BQ5VTL8 U1.36-201ENST00000620684 176 ntBASIC3.09□□□□□ -1.91
PRPF38BQ5VTL8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
PRPF38BQ5VTL8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.09□□□□□ -1.92
PRPF38BQ5VTL8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 MIR424-201ENST00000362227 98 ntBASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 RNU6-457P-201ENST00000363999 107 ntBASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 RNU1-112P-201ENST00000364401 164 ntBASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 RNU6-1163P-201ENST00000364516 107 ntBASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 RNU6-805P-201ENST00000365643 106 ntBASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 SNORA64.4-201ENST00000516632 81 ntBASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 RNA5SP480-201ENST00000516840 109 ntBASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 SNORA74.3-201ENST00000517108 154 ntBASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 RNU6-86P-201ENST00000606534 107 ntBASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 MAPK10-266ENST00000641066 6555 ntBASIC3.08□□□□□ -1.92
PRPF38BQ5VTL8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.07□□□□□ -1.92
PRPF38BQ5VTL8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PRPF38BQ5VTL8 RNA5SP383-201ENST00000362934 120 ntBASIC3.07□□□□□ -1.92
PRPF38BQ5VTL8 Y_RNA.354-201ENST00000365448 111 ntBASIC3.07□□□□□ -1.92
PRPF38BQ5VTL8 RPS12P2-201ENST00000439728 269 ntBASIC3.07□□□□□ -1.92
PRPF38BQ5VTL8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.07□□□□□ -1.92
PRPF38BQ5VTL8 RNU7-2P-201ENST00000516096 62 ntBASIC3.07□□□□□ -1.92
PRPF38BQ5VTL8 AC104027.1-201ENST00000521887 300 ntBASIC3.07□□□□□ -1.92
PRPF38BQ5VTL8 SEPT14P17-201ENST00000617978 177 ntBASIC3.07□□□□□ -1.92
PRPF38BQ5VTL8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.07□□□□□ -1.92
PRPF38BQ5VTL8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PRPF38BQ5VTL8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms