Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNY1P6-201ENST00000384193 109 ntBASIC1.4□□□□□ -2.19
RAE1P78406 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
RAE1P78406 RNU6-913P-201ENST00000390913 95 ntBASIC1.4□□□□□ -2.19
RAE1P78406 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.4□□□□□ -2.19
RAE1P78406 snoU13.25-201ENST00000458945 104 ntBASIC1.4□□□□□ -2.19
RAE1P78406 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
RAE1P78406 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.4□□□□□ -2.19
RAE1P78406 RNU6-970P-201ENST00000516312 107 ntBASIC1.4□□□□□ -2.19
RAE1P78406 AL645939.4-201ENST00000604495 135 ntBASIC1.4□□□□□ -2.19
RAE1P78406 AL022345.2-201ENST00000606307 135 ntBASIC1.4□□□□□ -2.19
RAE1P78406 AL020996.3-201ENST00000606617 222 ntBASIC1.4□□□□□ -2.19
RAE1P78406 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RAE1P78406 RNU6-309P-201ENST00000364573 106 ntBASIC1.39□□□□□ -2.19
RAE1P78406 RNU4-61P-201ENST00000411243 107 ntBASIC1.39□□□□□ -2.19
RAE1P78406 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
RAE1P78406 AC009474.2-201ENST00000451383 136 ntBASIC1.39□□□□□ -2.19
RAE1P78406 SNORA31.4-201ENST00000516049 129 ntBASIC1.39□□□□□ -2.19
RAE1P78406 RNU6-548P-201ENST00000517083 115 ntBASIC1.39□□□□□ -2.19
RAE1P78406 DNAJC19P9-201ENST00000555084 351 ntBASIC1.39□□□□□ -2.19
RAE1P78406 MIR4524B-201ENST00000581569 115 ntBASIC1.39□□□□□ -2.19
RAE1P78406 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.39□□□□□ -2.19
RAE1P78406 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
RAE1P78406 RNU6-349P-201ENST00000362402 107 ntBASIC1.38□□□□□ -2.19
RAE1P78406 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
RAE1P78406 Y_RNA.280-201ENST00000364765 112 ntBASIC1.38□□□□□ -2.19
RAE1P78406 RNA5SP261-201ENST00000410536 106 ntBASIC1.38□□□□□ -2.19
RAE1P78406 RNU6-1054P-201ENST00000411293 104 ntBASIC1.38□□□□□ -2.19
RAE1P78406 AL133373.1-201ENST00000497098 94 ntBASIC1.38□□□□□ -2.19
RAE1P78406 AC108210.2-201ENST00000503681 201 ntBASIC1.38□□□□□ -2.19
RAE1P78406 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
RAE1P78406 AP003716.2-201ENST00000528260 108 ntBASIC1.38□□□□□ -2.19
RAE1P78406 CYP3A52P-201ENST00000563326 91 ntBASIC1.38□□□□□ -2.19
RAE1P78406 SNORD53B-201ENST00000577887 78 ntBASIC1.38□□□□□ -2.19
RAE1P78406 MIR3121-201ENST00000579680 77 ntBASIC1.38□□□□□ -2.19
RAE1P78406 MIR548AO-201ENST00000579992 96 ntBASIC1.38□□□□□ -2.19
RAE1P78406 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.38□□□□□ -2.19
RAE1P78406 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RAE1P78406 RNU6-508P-201ENST00000363231 103 ntBASIC1.37□□□□□ -2.19
RAE1P78406 MIR539-201ENST00000365690 78 ntBASIC1.37□□□□□ -2.19
RAE1P78406 MIR3910-1-201ENST00000580936 111 ntBASIC1.37□□□□□ -2.19
RAE1P78406 AC021613.1-201ENST00000623880 111 ntBASIC1.37□□□□□ -2.19
RAE1P78406 AP000648.3-201ENST00000623539 4507 ntBASIC1.37□□□□□ -2.19
RAE1P78406 RNU6-690P-201ENST00000365242 106 ntBASIC1.36□□□□□ -2.19
RAE1P78406 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
RAE1P78406 SNORA26.6-201ENST00000391256 115 ntBASIC1.36□□□□□ -2.19
RAE1P78406 RNU6-1190P-201ENST00000410811 104 ntBASIC1.36□□□□□ -2.19
RAE1P78406 AL591806.2-201ENST00000433122 173 ntBASIC1.36□□□□□ -2.19
RAE1P78406 AC245047.7-201ENST00000440265 293 ntBASIC1.36□□□□□ -2.19
RAE1P78406 snoU13.23-201ENST00000458863 104 ntBASIC1.36□□□□□ -2.19
RAE1P78406 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
RAE1P78406 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
RAE1P78406 MIR8055-201ENST00000610739 97 ntBASIC1.36□□□□□ -2.19
RAE1P78406 Z97988.1-201ENST00000637697 135 ntBASIC1.36□□□□□ -2.19
RAE1P78406 RNA5SP264-201ENST00000363115 107 ntBASIC1.35□□□□□ -2.19
RAE1P78406 SNORA25.3-201ENST00000363205 127 ntBASIC1.35□□□□□ -2.19
RAE1P78406 Y_RNA.114-201ENST00000363265 113 ntBASIC1.35□□□□□ -2.19
RAE1P78406 SNORA1.1-201ENST00000364671 133 ntBASIC1.35□□□□□ -2.19
RAE1P78406 RNU6-81P-201ENST00000365608 104 ntBASIC1.35□□□□□ -2.19
RAE1P78406 RNU6-1319P-201ENST00000390855 104 ntBASIC1.35□□□□□ -2.19
RAE1P78406 RNU6-747P-201ENST00000390928 104 ntBASIC1.35□□□□□ -2.19
RAE1P78406 RNU6-241P-201ENST00000391148 104 ntBASIC1.35□□□□□ -2.19
RAE1P78406 MIR1302-7-201ENST00000408841 72 ntBASIC1.35□□□□□ -2.19
RAE1P78406 RNU6-177P-201ENST00000411257 104 ntBASIC1.35□□□□□ -2.19
RAE1P78406 RNU5E-3P-201ENST00000515913 68 ntBASIC1.35□□□□□ -2.19
RAE1P78406 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.35□□□□□ -2.19
RAE1P78406 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
RAE1P78406 AP000942.3-201ENST00000603702 160 ntBASIC1.35□□□□□ -2.19
RAE1P78406 MIR6717-201ENST00000622747 73 ntBASIC1.35□□□□□ -2.19
RAE1P78406 MIR103A2-201ENST00000362154 78 ntBASIC1.34□□□□□ -2.19
RAE1P78406 RNU6-647P-201ENST00000364243 107 ntBASIC1.34□□□□□ -2.19
RAE1P78406 RNU4-16P-201ENST00000364737 141 ntBASIC1.34□□□□□ -2.19
RAE1P78406 Y_RNA.430-201ENST00000384081 110 ntBASIC1.34□□□□□ -2.19
RAE1P78406 MIR764-201ENST00000390811 85 ntBASIC1.34□□□□□ -2.19
RAE1P78406 MIR1185-1-201ENST00000408598 86 ntBASIC1.34□□□□□ -2.19
RAE1P78406 HMGN1P33-201ENST00000432945 451 ntBASIC1.34□□□□□ -2.19
RAE1P78406 RNU7-45P-201ENST00000459460 63 ntBASIC1.34□□□□□ -2.19
RAE1P78406 AC048334.1-201ENST00000477975 159 ntBASIC1.34□□□□□ -2.19
RAE1P78406 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.34□□□□□ -2.19
RAE1P78406 SNORA31.2-201ENST00000516019 134 ntBASIC1.34□□□□□ -2.19
RAE1P78406 RNU6-240P-201ENST00000516098 97 ntBASIC1.34□□□□□ -2.19
RAE1P78406 RNU11-2P-201ENST00000516898 142 ntBASIC1.34□□□□□ -2.19
RAE1P78406 RNU6-789P-201ENST00000517105 102 ntBASIC1.34□□□□□ -2.19
RAE1P78406 AC133485.4-201ENST00000561835 220 ntBASIC1.34□□□□□ -2.19
RAE1P78406 AC138907.4-201ENST00000570107 226 ntBASIC1.34□□□□□ -2.19
RAE1P78406 MIR3152-201ENST00000579801 74 ntBASIC1.34□□□□□ -2.19
RAE1P78406 MIR8065-201ENST00000620577 100 ntBASIC1.34□□□□□ -2.19
RAE1P78406 MIR6841-201ENST00000637129 72 ntBASIC1.34□□□□□ -2.19
RAE1P78406 AC132825.6-201ENST00000638861 357 ntBASIC1.34□□□□□ -2.19
RAE1P78406 RNU1-17P-201ENST00000363022 152 ntBASIC1.33□□□□□ -2.2
RAE1P78406 Y_RNA.294-201ENST00000364916 102 ntBASIC1.33□□□□□ -2.2
RAE1P78406 SNORA67.5-201ENST00000391036 107 ntBASIC1.33□□□□□ -2.2
RAE1P78406 AL158147.1-201ENST00000443970 75 ntBASIC1.33□□□□□ -2.2
RAE1P78406 RNU6-893P-201ENST00000458841 100 ntBASIC1.33□□□□□ -2.2
RAE1P78406 RNU6-406P-201ENST00000516470 107 ntBASIC1.33□□□□□ -2.2
RAE1P78406 RNU6-971P-201ENST00000516920 106 ntBASIC1.33□□□□□ -2.2
RAE1P78406 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.33□□□□□ -2.2
RAE1P78406 AC015712.3-201ENST00000559380 164 ntBASIC1.33□□□□□ -2.2
RAE1P78406 HSPE1P19-201ENST00000603327 295 ntBASIC1.33□□□□□ -2.2
RAE1P78406 PRELID3BP2-201ENST00000605362 201 ntBASIC1.33□□□□□ -2.2
RAE1P78406 RNU6-997P-201ENST00000384725 107 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms