Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RNU1-112P-201ENST00000364401 164 ntBASIC2.64□□□□□ -1.99
EPHA4P54764 RNU6-242P-201ENST00000384359 107 ntBASIC2.64□□□□□ -1.99
EPHA4P54764 SNORD116-22-201ENST00000384430 92 ntBASIC2.64□□□□□ -1.99
EPHA4P54764 MIR196B-201ENST00000384852 84 ntBASIC2.64□□□□□ -1.99
EPHA4P54764 RPS29P6-201ENST00000438196 145 ntBASIC2.64□□□□□ -1.99
EPHA4P54764 RPS29P28-201ENST00000446439 141 ntBASIC2.64□□□□□ -1.99
EPHA4P54764 AC108938.1-201ENST00000451204 136 ntBASIC2.64□□□□□ -1.99
EPHA4P54764 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.64□□□□□ -1.99
EPHA4P54764 MIR548Z-201ENST00000584743 97 ntBASIC2.64□□□□□ -1.99
EPHA4P54764 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
EPHA4P54764 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
EPHA4P54764 RNY1P10-201ENST00000363268 113 ntBASIC2.63□□□□□ -1.99
EPHA4P54764 SNORD38.1-201ENST00000363863 68 ntBASIC2.63□□□□□ -1.99
EPHA4P54764 RNU6-865P-201ENST00000364772 107 ntBASIC2.63□□□□□ -1.99
EPHA4P54764 BTF3P4-201ENST00000418852 495 ntBASIC2.63□□□□□ -1.99
EPHA4P54764 SNORA9.3-201ENST00000516383 129 ntBASIC2.63□□□□□ -1.99
EPHA4P54764 RNU7-35P-201ENST00000517174 62 ntBASIC2.63□□□□□ -1.99
EPHA4P54764 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
EPHA4P54764 VTRNA1-1-201ENST00000363120 99 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 SNORD116-10-201ENST00000363791 102 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 Y_RNA.467-201ENST00000384297 102 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 RNU6-342P-201ENST00000384521 104 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 RNU6-813P-201ENST00000384691 107 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 MIR206-201ENST00000384872 86 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 RNU2-40P-201ENST00000410833 196 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 RNU6-1086P-201ENST00000410930 100 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 Y_RNA.685-201ENST00000516532 108 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 SNORA31.25-201ENST00000517242 134 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 MIR3670-2-201ENST00000582974 65 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 MIR3670-1-201ENST00000584160 65 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 MIR3670-3-201ENST00000584855 65 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 MIR3670-4-201ENST00000612260 65 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 MIR8065-201ENST00000620577 100 ntBASIC2.62□□□□□ -1.99
EPHA4P54764 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
EPHA4P54764 RNU1-52P-201ENST00000384190 164 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-447P-201ENST00000410293 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-1118P-201ENST00000410382 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-1076P-201ENST00000410397 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-355P-201ENST00000410427 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-791P-201ENST00000410467 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-705P-201ENST00000410601 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-1100P-201ENST00000410691 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-860P-201ENST00000410860 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-1217P-201ENST00000411276 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-785P-201ENST00000411324 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-592P-201ENST00000411333 103 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 AC011753.1-201ENST00000451001 220 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 AC234781.5-201ENST00000508429 271 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-917P-201ENST00000516294 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 RNU6-638P-201ENST00000516582 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.61□□□□□ -1.99
EPHA4P54764 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.61□□□□□ -1.99
EPHA4P54764 U6.90-201ENST00000614007 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 MIR376B-201ENST00000614515 100 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 U6.70-201ENST00000620287 104 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 MIR4251-201ENST00000635819 61 ntBASIC2.61□□□□□ -1.99
EPHA4P54764 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.6□□□□□ -1.99
EPHA4P54764 SNORD38.2-201ENST00000384470 69 ntBASIC2.6□□□□□ -1.99
EPHA4P54764 SNORD38B-201ENST00000384690 67 ntBASIC2.6□□□□□ -1.99
EPHA4P54764 RNU6-1275P-201ENST00000391087 107 ntBASIC2.6□□□□□ -1.99
EPHA4P54764 RNU6-602P-201ENST00000411155 105 ntBASIC2.6□□□□□ -1.99
EPHA4P54764 AC109327.2-201ENST00000448339 378 ntBASIC2.6□□□□□ -1.99
EPHA4P54764 RNA5SP282-201ENST00000516355 108 ntBASIC2.6□□□□□ -1.99
EPHA4P54764 MIR3935-201ENST00000583472 104 ntBASIC2.6□□□□□ -1.99
EPHA4P54764 SNORD38B-202ENST00000625943 69 ntBASIC2.6□□□□□ -1.99
EPHA4P54764 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
EPHA4P54764 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
EPHA4P54764 MIR449A-201ENST00000362113 91 ntBASIC2.59□□□□□ -1.99
EPHA4P54764 SNORA3A-201ENST00000364113 130 ntBASIC2.59□□□□□ -1.99
EPHA4P54764 SNORD78.1-201ENST00000390866 65 ntBASIC2.59□□□□□ -1.99
EPHA4P54764 AC090844.1-201ENST00000422019 156 ntBASIC2.59□□□□□ -1.99
EPHA4P54764 AL445685.2-201ENST00000422551 342 ntBASIC2.59□□□□□ -1.99
EPHA4P54764 AC022137.1-201ENST00000483735 151 ntBASIC2.59□□□□□ -1.99
EPHA4P54764 RNU7-193P-201ENST00000516723 65 ntBASIC2.59□□□□□ -1.99
EPHA4P54764 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.59□□□□□ -1.99
EPHA4P54764 MIR3202-2-201ENST00000635980 79 ntBASIC2.59□□□□□ -1.99
EPHA4P54764 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
EPHA4P54764 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.58□□□□□ -2
EPHA4P54764 SNORD114-10-201ENST00000363409 72 ntBASIC2.58□□□□□ -2
EPHA4P54764 Y_RNA.448-201ENST00000384185 108 ntBASIC2.58□□□□□ -2
EPHA4P54764 RNA5SP237-201ENST00000410414 113 ntBASIC2.58□□□□□ -2
EPHA4P54764 AC004965.1-201ENST00000413033 213 ntBASIC2.58□□□□□ -2
EPHA4P54764 RNU7-79P-201ENST00000516082 62 ntBASIC2.58□□□□□ -2
EPHA4P54764 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.58□□□□□ -2
EPHA4P54764 RNA5SP48-201ENST00000363969 126 ntBASIC2.57□□□□□ -2
EPHA4P54764 U8.15-201ENST00000390947 134 ntBASIC2.57□□□□□ -2
EPHA4P54764 SNORD67.1-201ENST00000516618 108 ntBASIC2.57□□□□□ -2
EPHA4P54764 SNORA31.15-201ENST00000516771 132 ntBASIC2.57□□□□□ -2
EPHA4P54764 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.57□□□□□ -2
EPHA4P54764 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.57□□□□□ -2
EPHA4P54764 Y_RNA.140-201ENST00000363474 103 ntBASIC2.56□□□□□ -2
EPHA4P54764 Y_RNA.190-201ENST00000363964 101 ntBASIC2.56□□□□□ -2
EPHA4P54764 RNA5SP259-201ENST00000365541 109 ntBASIC2.56□□□□□ -2
EPHA4P54764 MIR524-201ENST00000385242 87 ntBASIC2.56□□□□□ -2
EPHA4P54764 RPL31P63-201ENST00000422565 375 ntBASIC2.56□□□□□ -2
EPHA4P54764 RPL39P39-201ENST00000455840 151 ntBASIC2.56□□□□□ -2
EPHA4P54764 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.56□□□□□ -2
EPHA4P54764 MIR6817-201ENST00000615588 66 ntBASIC2.56□□□□□ -2
EPHA4P54764 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
EPHA4P54764 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms