Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC108206.1-201ENST00000570186 4159 ntBASIC2.77□□□□□ -1.97
RNF144AP50876 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
RNF144AP50876 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF144AP50876 SNORA2B-201ENST00000384583 137 ntBASIC2.76□□□□□ -1.97
RNF144AP50876 AL023284.1-201ENST00000403956 276 ntBASIC2.76□□□□□ -1.97
RNF144AP50876 MIR1283-2-201ENST00000408621 87 ntBASIC2.76□□□□□ -1.97
RNF144AP50876 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF144AP50876 AP004217.1-201ENST00000480579 346 ntBASIC2.76□□□□□ -1.97
RNF144AP50876 RN7SL633P-201ENST00000488974 297 ntBASIC2.76□□□□□ -1.97
RNF144AP50876 AC099513.1-201ENST00000490423 301 ntBASIC2.76□□□□□ -1.97
RNF144AP50876 RNU7-43P-201ENST00000516554 64 ntBASIC2.76□□□□□ -1.97
RNF144AP50876 RNA5SP481-201ENST00000516814 122 ntBASIC2.76□□□□□ -1.97
RNF144AP50876 RNA5SP137-201ENST00000516833 135 ntBASIC2.76□□□□□ -1.97
RNF144AP50876 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.76□□□□□ -1.97
RNF144AP50876 AC008133.2-201ENST00000624540 351 ntBASIC2.76□□□□□ -1.97
RNF144AP50876 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RNF144AP50876 AC009487.2-201ENST00000420969 6821 ntBASIC2.75□□□□□ -1.97
RNF144AP50876 RNU6-1229P-201ENST00000364295 107 ntBASIC2.75□□□□□ -1.97
RNF144AP50876 RNA5SP465-201ENST00000391195 109 ntBASIC2.75□□□□□ -1.97
RNF144AP50876 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.75□□□□□ -1.97
RNF144AP50876 SNORA74D-201ENST00000516404 141 ntBASIC2.75□□□□□ -1.97
RNF144AP50876 SUB1P4-201ENST00000566062 339 ntBASIC2.75□□□□□ -1.97
RNF144AP50876 SNORD14A-201ENST00000606526 91 ntBASIC2.75□□□□□ -1.97
RNF144AP50876 U7.4-201ENST00000614961 63 ntBASIC2.75□□□□□ -1.97
RNF144AP50876 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
RNF144AP50876 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RNF144AP50876 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RNF144AP50876 MIR424-201ENST00000362227 98 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 VTRNA1-1-201ENST00000363120 99 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 RNU6-112P-201ENST00000363599 104 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 SNORA48.1-201ENST00000390879 135 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 AC022018.1-201ENST00000430685 241 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 RNU7-26P-201ENST00000458980 63 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 RNA5SP341-201ENST00000516261 117 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 RNU7-153P-201ENST00000516455 62 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 MIR4764-201ENST00000580680 88 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 AL162274.2-201ENST00000614406 332 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 MIR8057-201ENST00000620957 69 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 SCARNA4.1-201ENST00000628597 123 ntBASIC2.74□□□□□ -1.97
RNF144AP50876 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RNF144AP50876 AC131280.1-202ENST00000624067 4211 ntBASIC2.73□□□□□ -1.97
RNF144AP50876 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
RNF144AP50876 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RNF144AP50876 AC080100.1-201ENST00000624239 5356 ntBASIC2.73□□□□□ -1.97
RNF144AP50876 AL035425.3-201ENST00000564206 4996 ntBASIC2.73□□□□□ -1.97
RNF144AP50876 RNU6-296P-201ENST00000384608 107 ntBASIC2.73□□□□□ -1.97
RNF144AP50876 SNORD38B-201ENST00000384690 67 ntBASIC2.73□□□□□ -1.97
RNF144AP50876 MIR1236-201ENST00000408340 102 ntBASIC2.73□□□□□ -1.97
RNF144AP50876 SNORD88.1-201ENST00000408684 91 ntBASIC2.73□□□□□ -1.97
RNF144AP50876 RNA5SP237-201ENST00000410414 113 ntBASIC2.73□□□□□ -1.97
RNF144AP50876 SUMO1P4-201ENST00000429430 302 ntBASIC2.73□□□□□ -1.97
RNF144AP50876 SNORD38B-202ENST00000625943 69 ntBASIC2.73□□□□□ -1.97
RNF144AP50876 MIR6733-201ENST00000635723 61 ntBASIC2.73□□□□□ -1.97
RNF144AP50876 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
RNF144AP50876 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RNF144AP50876 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF144AP50876 MIR422A-201ENST00000362286 90 ntBASIC2.72□□□□□ -1.97
RNF144AP50876 RNU6-315P-201ENST00000362666 107 ntBASIC2.72□□□□□ -1.97
RNF144AP50876 SNORA38-201ENST00000363946 132 ntBASIC2.72□□□□□ -1.97
RNF144AP50876 SNORA71.1-201ENST00000364523 117 ntBASIC2.72□□□□□ -1.97
RNF144AP50876 RNY1P13-201ENST00000365030 105 ntBASIC2.72□□□□□ -1.97
RNF144AP50876 MIR518A2-201ENST00000384966 87 ntBASIC2.72□□□□□ -1.97
RNF144AP50876 MIR520C-201ENST00000385005 87 ntBASIC2.72□□□□□ -1.97
RNF144AP50876 AC133485.1-201ENST00000567176 124 ntBASIC2.72□□□□□ -1.97
RNF144AP50876 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
RNF144AP50876 RNU6-129P-201ENST00000391022 107 ntBASIC2.71□□□□□ -1.98
RNF144AP50876 AC027119.1-201ENST00000440877 241 ntBASIC2.71□□□□□ -1.98
RNF144AP50876 AC090255.1-201ENST00000495779 349 ntBASIC2.71□□□□□ -1.98
RNF144AP50876 RPS29P11-201ENST00000496507 171 ntBASIC2.71□□□□□ -1.98
RNF144AP50876 SNORA25.13-201ENST00000516395 103 ntBASIC2.71□□□□□ -1.98
RNF144AP50876 MIR548AO-201ENST00000579992 96 ntBASIC2.71□□□□□ -1.98
RNF144AP50876 MIR3200-201ENST00000580767 85 ntBASIC2.71□□□□□ -1.98
RNF144AP50876 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.71□□□□□ -1.98
RNF144AP50876 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
RNF144AP50876 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RNF144AP50876 RNU4-32P-201ENST00000363404 141 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 Y_RNA.545-201ENST00000384652 105 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 MIR128-1-201ENST00000384921 82 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RNF144AP50876 NDUFB4P4-201ENST00000404822 243 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 RNA5SP501-201ENST00000410990 112 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 RPS29P6-201ENST00000438196 145 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 AC105272.1-201ENST00000438604 198 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 AC087499.7-201ENST00000441958 109 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 AC011753.1-201ENST00000451001 220 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 MIR8066-201ENST00000617280 78 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 SCARNA15.3-201ENST00000626315 122 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 MIR622-201ENST00000638396 96 ntBASIC2.7□□□□□ -1.98
RNF144AP50876 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RNF144AP50876 RNU6-525P-201ENST00000363685 104 ntBASIC2.69□□□□□ -1.98
RNF144AP50876 AC141846.1-201ENST00000568348 142 ntBASIC2.69□□□□□ -1.98
RNF144AP50876 MIR4325-201ENST00000583049 90 ntBASIC2.69□□□□□ -1.98
RNF144AP50876 FO624990.1-201ENST00000636373 85 ntBASIC2.69□□□□□ -1.98
RNF144AP50876 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF144AP50876 HSBP1P2-201ENST00000299671 229 ntBASIC2.68□□□□□ -1.98
RNF144AP50876 RNU6-1094P-201ENST00000362416 104 ntBASIC2.68□□□□□ -1.98
RNF144AP50876 AP000753.3-201ENST00000604083 169 ntBASIC2.68□□□□□ -1.98
RNF144AP50876 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms