Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.26□□□□□ -2.05
GDNFP39905 RNU6-857P-201ENST00000515893 110 ntBASIC2.26□□□□□ -2.05
GDNFP39905 MIR5092-201ENST00000583139 88 ntBASIC2.26□□□□□ -2.05
GDNFP39905 FAM106DP-201ENST00000586416 501 ntBASIC2.26□□□□□ -2.05
GDNFP39905 SEPT14P17-201ENST00000617978 177 ntBASIC2.26□□□□□ -2.05
GDNFP39905 SNORD3E-202ENST00000627253 216 ntBASIC2.26□□□□□ -2.05
GDNFP39905 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
GDNFP39905 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
GDNFP39905 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
GDNFP39905 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
GDNFP39905 SNORD38.1-201ENST00000363863 68 ntBASIC2.25□□□□□ -2.05
GDNFP39905 Y_RNA.537-201ENST00000384626 109 ntBASIC2.25□□□□□ -2.05
GDNFP39905 MIR34C-201ENST00000384831 77 ntBASIC2.25□□□□□ -2.05
GDNFP39905 AL138827.1-201ENST00000402666 306 ntBASIC2.25□□□□□ -2.05
GDNFP39905 AC087499.2-201ENST00000432861 149 ntBASIC2.25□□□□□ -2.05
GDNFP39905 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.25□□□□□ -2.05
GDNFP39905 RN7SKP132-201ENST00000516001 208 ntBASIC2.25□□□□□ -2.05
GDNFP39905 RNA5SP137-201ENST00000516833 135 ntBASIC2.25□□□□□ -2.05
GDNFP39905 MIR4709-201ENST00000577272 72 ntBASIC2.25□□□□□ -2.05
GDNFP39905 MIR8055-201ENST00000610739 97 ntBASIC2.25□□□□□ -2.05
GDNFP39905 AL513423.1-201ENST00000621695 132 ntBASIC2.25□□□□□ -2.05
GDNFP39905 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
GDNFP39905 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
GDNFP39905 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
GDNFP39905 MIR518A2-201ENST00000384966 87 ntBASIC2.24□□□□□ -2.05
GDNFP39905 RPS29P28-201ENST00000446439 141 ntBASIC2.24□□□□□ -2.05
GDNFP39905 RPL23AP6-201ENST00000446637 472 ntBASIC2.24□□□□□ -2.05
GDNFP39905 AC099513.1-201ENST00000490423 301 ntBASIC2.24□□□□□ -2.05
GDNFP39905 EIF4BP1-201ENST00000554881 351 ntBASIC2.24□□□□□ -2.05
GDNFP39905 SUB1P4-201ENST00000566062 339 ntBASIC2.24□□□□□ -2.05
GDNFP39905 AC006386.2-201ENST00000624491 75 ntBASIC2.24□□□□□ -2.05
GDNFP39905 AC012005.1-201ENST00000624575 75 ntBASIC2.24□□□□□ -2.05
GDNFP39905 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.24□□□□□ -2.05
GDNFP39905 MIR548BB-201ENST00000626714 66 ntBASIC2.24□□□□□ -2.05
GDNFP39905 AC006160.2-201ENST00000637708 154 ntBASIC2.24□□□□□ -2.05
GDNFP39905 AL365361.1-201ENST00000566942 3481 ntBASIC2.24□□□□□ -2.05
GDNFP39905 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
GDNFP39905 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
GDNFP39905 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
GDNFP39905 AC005336.3-201ENST00000623833 2679 ntBASIC2.23□□□□□ -2.05
GDNFP39905 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
GDNFP39905 RNU6-457P-201ENST00000363999 107 ntBASIC2.23□□□□□ -2.05
GDNFP39905 RNU6-652P-201ENST00000365488 107 ntBASIC2.23□□□□□ -2.05
GDNFP39905 RNU6-296P-201ENST00000384608 107 ntBASIC2.23□□□□□ -2.05
GDNFP39905 RNU6-1067P-201ENST00000384752 107 ntBASIC2.23□□□□□ -2.05
GDNFP39905 SNORA48.1-201ENST00000390879 135 ntBASIC2.23□□□□□ -2.05
GDNFP39905 Y_RNA.609-201ENST00000410669 89 ntBASIC2.23□□□□□ -2.05
GDNFP39905 AL445685.2-201ENST00000422551 342 ntBASIC2.23□□□□□ -2.05
GDNFP39905 snoU13.27-201ENST00000459278 104 ntBASIC2.23□□□□□ -2.05
GDNFP39905 snoU13.16-201ENST00000459350 104 ntBASIC2.23□□□□□ -2.05
GDNFP39905 SNORD67.1-201ENST00000516618 108 ntBASIC2.23□□□□□ -2.05
GDNFP39905 RNU7-35P-201ENST00000517174 62 ntBASIC2.23□□□□□ -2.05
GDNFP39905 MIR4658-201ENST00000584344 65 ntBASIC2.23□□□□□ -2.05
GDNFP39905 MIR7106-201ENST00000612419 65 ntBASIC2.23□□□□□ -2.05
GDNFP39905 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.23□□□□□ -2.05
GDNFP39905 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
GDNFP39905 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
GDNFP39905 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
GDNFP39905 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
GDNFP39905 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
GDNFP39905 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.22□□□□□ -2.05
GDNFP39905 AP006437.1-201ENST00000641440 3685 ntBASIC2.22□□□□□ -2.05
GDNFP39905 RNU6-112P-201ENST00000363599 104 ntBASIC2.22□□□□□ -2.05
GDNFP39905 Y_RNA.448-201ENST00000384185 108 ntBASIC2.22□□□□□ -2.05
GDNFP39905 RNU6-1086P-201ENST00000410930 100 ntBASIC2.22□□□□□ -2.05
GDNFP39905 RNA5SP501-201ENST00000410990 112 ntBASIC2.22□□□□□ -2.05
GDNFP39905 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.22□□□□□ -2.05
GDNFP39905 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.22□□□□□ -2.05
GDNFP39905 AC105081.1-201ENST00000617727 106 ntBASIC2.22□□□□□ -2.05
GDNFP39905 MIR8065-201ENST00000620577 100 ntBASIC2.22□□□□□ -2.05
GDNFP39905 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.22□□□□□ -2.05
GDNFP39905 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
GDNFP39905 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
GDNFP39905 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
GDNFP39905 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
GDNFP39905 RNU6-509P-201ENST00000363519 107 ntBASIC2.21□□□□□ -2.06
GDNFP39905 SNORA80A-201ENST00000363922 136 ntBASIC2.21□□□□□ -2.06
GDNFP39905 SNORA38-201ENST00000363946 132 ntBASIC2.21□□□□□ -2.06
GDNFP39905 RNU6-24P-201ENST00000384440 107 ntBASIC2.21□□□□□ -2.06
GDNFP39905 RNA5SP465-201ENST00000391195 109 ntBASIC2.21□□□□□ -2.06
GDNFP39905 RNA5SP21-201ENST00000410917 96 ntBASIC2.21□□□□□ -2.06
GDNFP39905 AC105272.1-201ENST00000438604 198 ntBASIC2.21□□□□□ -2.06
GDNFP39905 AC234781.5-201ENST00000508429 271 ntBASIC2.21□□□□□ -2.06
GDNFP39905 SNORA74.3-201ENST00000517108 154 ntBASIC2.21□□□□□ -2.06
GDNFP39905 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
GDNFP39905 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
GDNFP39905 RNU6-865P-201ENST00000364772 107 ntBASIC2.2□□□□□ -2.06
GDNFP39905 Y_RNA.567-201ENST00000384736 106 ntBASIC2.2□□□□□ -2.06
GDNFP39905 RNU6-602P-201ENST00000411155 105 ntBASIC2.2□□□□□ -2.06
GDNFP39905 RNU1-98P-201ENST00000458992 160 ntBASIC2.2□□□□□ -2.06
GDNFP39905 RNU7-79P-201ENST00000516082 62 ntBASIC2.2□□□□□ -2.06
GDNFP39905 RNU6-65P-201ENST00000516332 98 ntBASIC2.2□□□□□ -2.06
GDNFP39905 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.2□□□□□ -2.06
GDNFP39905 AC121758.2-201ENST00000553271 193 ntBASIC2.2□□□□□ -2.06
GDNFP39905 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.2□□□□□ -2.06
GDNFP39905 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
GDNFP39905 RNU6-633P-201ENST00000362612 103 ntBASIC2.19□□□□□ -2.06
GDNFP39905 RNU6-1244P-201ENST00000363614 108 ntBASIC2.19□□□□□ -2.06
GDNFP39905 RNU6-1296P-201ENST00000383879 107 ntBASIC2.19□□□□□ -2.06
GDNFP39905 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms