Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 SNORD12C-201ENST00000386307 89 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 SNORA26.5-201ENST00000391215 123 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 MTND4P19-201ENST00000446659 478 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL18A1P39060 RNU2-11P-201ENST00000459191 187 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 AC005357.1-201ENST00000588399 301 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 AC099654.14-201ENST00000638599 341 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 MIR145-201ENST00000384967 88 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 RNU4-83P-201ENST00000410863 133 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 MTND1P34-201ENST00000438556 671 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 MTATP6P23-201ENST00000440153 476 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 AC113139.1-201ENST00000605049 239 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 SNORD113-5-201ENST00000607261 78 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 AC073869.6-201ENST00000640656 341 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 AC091304.10-201ENST00000641554 121 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.18□□□□□ -2.44
COL18A1P39060 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.18□□□□□ -2.44
COL18A1P39060 RNU6-652P-201ENST00000365488 107 ntBASIC-0.18□□□□□ -2.44
COL18A1P39060 AL160004.2-201ENST00000432935 350 ntBASIC-0.18□□□□□ -2.44
COL18A1P39060 AL138825.1-201ENST00000618587 192 ntBASIC-0.18□□□□□ -2.44
COL18A1P39060 MIR6828-201ENST00000636181 60 ntBASIC-0.18□□□□□ -2.44
COL18A1P39060 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 MIR593-201ENST00000384856 100 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 RNA5SP261-201ENST00000410536 106 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 AC069439.1-201ENST00000494739 167 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 RNU6-365P-201ENST00000517113 106 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.19□□□□□ -2.44
COL18A1P39060 AC122108.2-201ENST00000611946 526 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 SNORD115-24-201ENST00000363528 82 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 PCNPP3-201ENST00000393579 471 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 RNU4-30P-201ENST00000410245 143 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 RNU6-320P-201ENST00000516511 106 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 RNU6-504P-201ENST00000516568 104 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 MIR3152-201ENST00000579801 74 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 AL049861.1-201ENST00000603130 150 ntBASIC-0.19□□□□□ -2.44
COL18A1P39060 MIR302B-201ENST00000362188 73 ntBASIC-0.2□□□□□ -2.44
COL18A1P39060 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.2□□□□□ -2.44
COL18A1P39060 MIR643-201ENST00000385267 97 ntBASIC-0.2□□□□□ -2.44
COL18A1P39060 RNA5SP237-201ENST00000410414 113 ntBASIC-0.2□□□□□ -2.44
COL18A1P39060 RNU6-938P-201ENST00000411285 103 ntBASIC-0.2□□□□□ -2.44
COL18A1P39060 RNU7-96P-201ENST00000459535 64 ntBASIC-0.2□□□□□ -2.44
COL18A1P39060 RNU6-559P-201ENST00000516151 98 ntBASIC-0.2□□□□□ -2.44
COL18A1P39060 RNU6-782P-201ENST00000516852 104 ntBASIC-0.2□□□□□ -2.44
COL18A1P39060 SNORD116.3-201ENST00000517176 78 ntBASIC-0.2□□□□□ -2.44
COL18A1P39060 AC131281.1-201ENST00000522984 164 ntBASIC-0.2□□□□□ -2.44
COL18A1P39060 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.21□□□□□ -2.44
COL18A1P39060 SNORD114-5-201ENST00000362928 70 ntBASIC-0.21□□□□□ -2.44
COL18A1P39060 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.21□□□□□ -2.44
COL18A1P39060 RNU6-937P-201ENST00000384325 106 ntBASIC-0.21□□□□□ -2.44
COL18A1P39060 RNU6-383P-201ENST00000410864 94 ntBASIC-0.21□□□□□ -2.44
COL18A1P39060 MTND4P17-201ENST00000470444 350 ntBASIC-0.21□□□□□ -2.44
COL18A1P39060 RNU6-764P-201ENST00000516396 105 ntBASIC-0.21□□□□□ -2.44
COL18A1P39060 SNORA40.14-201ENST00000516543 86 ntBASIC-0.21□□□□□ -2.44
COL18A1P39060 MIR5692C2-201ENST00000577959 77 ntBASIC-0.21□□□□□ -2.44
COL18A1P39060 MIR4724-201ENST00000579485 89 ntBASIC-0.21□□□□□ -2.44
COL18A1P39060 RN7SL660P-201ENST00000614852 299 ntBASIC-0.21□□□□□ -2.44
COL18A1P39060 AC013791.1-201ENST00000616619 62 ntBASIC-0.21□□□□□ -2.44
COL18A1P39060 RNU6-403P-201ENST00000363163 104 ntBASIC-0.22□□□□□ -2.44
COL18A1P39060 RNU4-80P-201ENST00000363200 141 ntBASIC-0.22□□□□□ -2.44
COL18A1P39060 RNA5SP128-201ENST00000365305 116 ntBASIC-0.22□□□□□ -2.44
COL18A1P39060 MIR559-201ENST00000385188 96 ntBASIC-0.22□□□□□ -2.44
COL18A1P39060 MIR760-201ENST00000390220 80 ntBASIC-0.22□□□□□ -2.44
COL18A1P39060 RNU6-308P-201ENST00000390957 107 ntBASIC-0.22□□□□□ -2.44
COL18A1P39060 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.22□□□□□ -2.44
COL18A1P39060 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.22□□□□□ -2.44
COL18A1P39060 SNORA31.14-201ENST00000516728 116 ntBASIC-0.22□□□□□ -2.44
COL18A1P39060 RNA5SP47-201ENST00000517230 109 ntBASIC-0.22□□□□□ -2.44
COL18A1P39060 MIR5688-201ENST00000580619 83 ntBASIC-0.22□□□□□ -2.44
COL18A1P39060 MIR6082-201ENST00000613604 109 ntBASIC-0.22□□□□□ -2.44
COL18A1P39060 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.22□□□□□ -2.45
COL18A1P39060 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.22□□□□□ -2.45
COL18A1P39060 SNORD28-201ENST00000384706 75 ntBASIC-0.22□□□□□ -2.45
COL18A1P39060 MIR548I3-201ENST00000408378 149 ntBASIC-0.22□□□□□ -2.45
COL18A1P39060 RNU6-998P-201ENST00000515894 101 ntBASIC-0.22□□□□□ -2.45
COL18A1P39060 SNORD77.4-201ENST00000516158 81 ntBASIC-0.22□□□□□ -2.45
COL18A1P39060 AL021707.8-201ENST00000609428 183 ntBASIC-0.22□□□□□ -2.45
COL18A1P39060 MIR7107-201ENST00000611489 80 ntBASIC-0.22□□□□□ -2.45
COL18A1P39060 MIR8066-201ENST00000617280 78 ntBASIC-0.22□□□□□ -2.45
COL18A1P39060 MIR4272-201ENST00000635924 64 ntBASIC-0.22□□□□□ -2.45
COL18A1P39060 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 SNORD81.2-201ENST00000365153 76 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 SNORD61-201ENST00000384252 73 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 RNU6-127P-201ENST00000390897 107 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 SNORA26-201ENST00000391286 122 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 AL138752.1-201ENST00000452964 351 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 RPL39P34-201ENST00000477141 156 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 RNU6-765P-201ENST00000516916 99 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 MIR4491-201ENST00000581087 68 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 MIR4639-201ENST00000584938 69 ntBASIC-0.23□□□□□ -2.45
COL18A1P39060 MIR4320-201ENST00000636981 65 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms