Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MIR516B2-201ENST00000385190 85 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
COL5A1P20908 AL451046.2-201ENST00000403074 277 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 AC074198.2-201ENST00000508153 258 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 RNA5SP153-201ENST00000516498 76 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 RNU7-43P-201ENST00000516554 64 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 RNU6-504P-201ENST00000516568 104 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 SNORD45.4-201ENST00000516629 73 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 SNORA18.7-201ENST00000516910 131 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.66□□□□□ -2.3
COL5A1P20908 AL513534.2-201ENST00000603836 250 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
COL5A1P20908 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.66□□□□□ -2.3
COL5A1P20908 AC067863.3-201ENST00000624172 122 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 SNORD3E-202ENST00000627253 216 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 MIR6844-201ENST00000637122 62 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
COL5A1P20908 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.66□□□□□ -2.3
COL5A1P20908 Y_RNA.91-201ENST00000363042 107 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 Y_RNA.150-201ENST00000363562 102 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 RNU6-268P-201ENST00000364174 107 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 Y_RNA.272-201ENST00000364696 102 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 SNORA22-201ENST00000383907 134 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 Y_RNA.410-201ENST00000383992 113 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 RNU6-643P-201ENST00000384018 107 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 SNORA22C-201ENST00000384614 134 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 RNU6-1067P-201ENST00000384752 107 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 MIR618-201ENST00000385287 98 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 U8.17-201ENST00000391292 132 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 SEPT7P4-201ENST00000437076 306 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 HMGN2P32-201ENST00000444648 269 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 RNU2-11P-201ENST00000459191 187 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 Y_RNA.666-201ENST00000516187 112 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 RNU6-1270P-201ENST00000517128 108 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 RNU7-181P-201ENST00000517234 74 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 RNU6-1116P-201ENST00000517269 99 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 AC112693.2-201ENST00000556538 232 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
COL5A1P20908 MIR367-201ENST00000362299 68 ntBASIC0.65□□□□□ -2.31
COL5A1P20908 SNORA24-201ENST00000384096 131 ntBASIC0.65□□□□□ -2.31
COL5A1P20908 Y_RNA.486-201ENST00000384398 107 ntBASIC0.65□□□□□ -2.31
COL5A1P20908 MIR452-201ENST00000385020 85 ntBASIC0.65□□□□□ -2.31
COL5A1P20908 MIR624-201ENST00000385217 97 ntBASIC0.65□□□□□ -2.31
COL5A1P20908 RNU2-70P-201ENST00000410718 179 ntBASIC0.65□□□□□ -2.31
COL5A1P20908 RNU6-165P-201ENST00000517170 99 ntBASIC0.65□□□□□ -2.31
COL5A1P20908 SNORA77B-201ENST00000578179 125 ntBASIC0.65□□□□□ -2.31
COL5A1P20908 AC087685.1-201ENST00000587507 141 ntBASIC0.65□□□□□ -2.31
COL5A1P20908 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.64□□□□□ -2.31
COL5A1P20908 SNORD33-201ENST00000362761 85 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 SNORA1.2-201ENST00000365189 134 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 Y_RNA.400-201ENST00000383963 111 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 RNU6-939P-201ENST00000384634 107 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 MIR520C-201ENST00000385005 87 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 PCNPP3-201ENST00000393579 471 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 RNU6-588P-201ENST00000410281 105 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 Y_RNA.621-201ENST00000411065 96 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 RNU6-602P-201ENST00000411155 105 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 AC092628.1-201ENST00000436250 252 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 STAG3L5P-204ENST00000443759 179 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 AL392103.1-201ENST00000447000 198 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 RPL39P39-201ENST00000455840 151 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 RNU6-917P-201ENST00000516294 104 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 RNU7-25P-201ENST00000516544 62 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.64□□□□□ -2.31
COL5A1P20908 Y_RNA.37-201ENST00000362606 108 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 Y_RNA.182-201ENST00000363880 111 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 Y_RNA.270-201ENST00000364693 104 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 Y_RNA.494-201ENST00000384432 111 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 RNU6-907P-201ENST00000390924 102 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 RNU6-239P-201ENST00000390990 99 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 MIR513C-201ENST00000401352 84 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 MIR548M-201ENST00000408260 86 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 Y_RNA.622-201ENST00000411091 108 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 AL121914.1-201ENST00000450188 156 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 RNU6-1219P-201ENST00000516143 112 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 AP003484.1-201ENST00000530974 250 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 MIR3144-201ENST00000579460 79 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 AC098479.1-201ENST00000609225 154 ntBASIC0.64□□□□□ -2.31
COL5A1P20908 SNORD14E-201ENST00000364009 85 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 Y_RNA.240-201ENST00000364469 95 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 RNU6-275P-201ENST00000364910 107 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 RNA5SP259-201ENST00000365541 109 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 RNU6-187P-201ENST00000384139 106 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 SNORA27-201ENST00000384323 126 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 MIR1185-1-201ENST00000408598 86 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 AC245047.7-201ENST00000440265 293 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 RPL30P7-201ENST00000479312 323 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 CYCTP-201ENST00000504253 315 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 RNU6-1299P-201ENST00000516316 100 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 SNORD116-25-201ENST00000516517 92 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 RNU6-902P-201ENST00000517212 91 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 AL512310.8-201ENST00000550183 120 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 MIR8065-201ENST00000620577 100 ntBASIC0.63□□□□□ -2.31
COL5A1P20908 Y_RNA.203-201ENST00000364106 102 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 U8.5-201ENST00000364528 136 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms