Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RPL23AP42-201ENST00000471152 471 ntBASIC2.3□□□□□ -2.04
PRPF40AO75400 AC104984.5-201ENST00000586878 94 ntBASIC2.3□□□□□ -2.04
PRPF40AO75400 MIR6715A-201ENST00000615929 79 ntBASIC2.3□□□□□ -2.04
PRPF40AO75400 MIR6129-201ENST00000616087 109 ntBASIC2.3□□□□□ -2.04
PRPF40AO75400 MIR219B-201ENST00000637023 88 ntBASIC2.3□□□□□ -2.04
PRPF40AO75400 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PRPF40AO75400 RNU6-215P-201ENST00000365169 102 ntBASIC2.29□□□□□ -2.04
PRPF40AO75400 RNU6-1319P-201ENST00000390855 104 ntBASIC2.29□□□□□ -2.04
PRPF40AO75400 RNU6-747P-201ENST00000390928 104 ntBASIC2.29□□□□□ -2.04
PRPF40AO75400 RNU6-241P-201ENST00000391148 104 ntBASIC2.29□□□□□ -2.04
PRPF40AO75400 RNU6-177P-201ENST00000411257 104 ntBASIC2.29□□□□□ -2.04
PRPF40AO75400 RNU7-123P-201ENST00000515911 60 ntBASIC2.29□□□□□ -2.04
PRPF40AO75400 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PRPF40AO75400 SNORD41-201ENST00000386967 70 ntBASIC2.28□□□□□ -2.04
PRPF40AO75400 RNU6-913P-201ENST00000390913 95 ntBASIC2.28□□□□□ -2.04
PRPF40AO75400 RNA5SP144-201ENST00000410846 116 ntBASIC2.28□□□□□ -2.04
PRPF40AO75400 AC005908.1-201ENST00000468701 347 ntBASIC2.28□□□□□ -2.04
PRPF40AO75400 RNU6-919P-201ENST00000516731 104 ntBASIC2.28□□□□□ -2.04
PRPF40AO75400 AL020996.3-201ENST00000606617 222 ntBASIC2.28□□□□□ -2.04
PRPF40AO75400 MIR4251-201ENST00000635819 61 ntBASIC2.28□□□□□ -2.04
PRPF40AO75400 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.28□□□□□ -2.04
PRPF40AO75400 Y_RNA.198-201ENST00000364013 98 ntBASIC2.27□□□□□ -2.05
PRPF40AO75400 SNORD116-21-201ENST00000384507 92 ntBASIC2.27□□□□□ -2.05
PRPF40AO75400 MIR548A1-201ENST00000385041 97 ntBASIC2.27□□□□□ -2.05
PRPF40AO75400 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.27□□□□□ -2.05
PRPF40AO75400 SNORA31.4-201ENST00000516049 129 ntBASIC2.27□□□□□ -2.05
PRPF40AO75400 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.26□□□□□ -2.05
PRPF40AO75400 RNU2-35P-201ENST00000516446 142 ntBASIC2.26□□□□□ -2.05
PRPF40AO75400 GHRLOS.1-201ENST00000610995 70 ntBASIC2.26□□□□□ -2.05
PRPF40AO75400 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.26□□□□□ -2.05
PRPF40AO75400 SNORA22.1-201ENST00000362701 134 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 SNORD33-201ENST00000362761 85 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 RNA5SP48-201ENST00000363969 126 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 SNORA1.1-201ENST00000364671 133 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 RNU6-880P-201ENST00000384526 107 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 RNU6-429P-201ENST00000384582 108 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 RNU6-1190P-201ENST00000410811 104 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.25□□□□□ -2.05
PRPF40AO75400 AC079140.2-201ENST00000506193 142 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 RNU7-41P-201ENST00000515917 61 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 MIR3198-2-201ENST00000577868 80 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 MIR3124-201ENST00000582636 67 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 MIR6717-201ENST00000622747 73 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 ZNF355P-201ENST00000427301 3216 ntBASIC2.25□□□□□ -2.05
PRPF40AO75400 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PRPF40AO75400 SNORD114-1-201ENST00000362705 72 ntBASIC2.24□□□□□ -2.05
PRPF40AO75400 RNU6-1065P-201ENST00000384513 106 ntBASIC2.24□□□□□ -2.05
PRPF40AO75400 AL035461.1-201ENST00000421490 332 ntBASIC2.24□□□□□ -2.05
PRPF40AO75400 RPL39P39-201ENST00000455840 151 ntBASIC2.24□□□□□ -2.05
PRPF40AO75400 AC019176.1-201ENST00000518519 225 ntBASIC2.24□□□□□ -2.05
PRPF40AO75400 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PRPF40AO75400 RPS3AP1-201ENST00000413190 320 ntBASIC2.23□□□□□ -2.05
PRPF40AO75400 MTATP6P29-201ENST00000415057 132 ntBASIC2.23□□□□□ -2.05
PRPF40AO75400 HMGN1P33-201ENST00000432945 451 ntBASIC2.23□□□□□ -2.05
PRPF40AO75400 RNU7-113P-201ENST00000459273 62 ntBASIC2.23□□□□□ -2.05
PRPF40AO75400 RNU6-947P-201ENST00000516264 106 ntBASIC2.23□□□□□ -2.05
PRPF40AO75400 RNU6-250P-201ENST00000516958 103 ntBASIC2.23□□□□□ -2.05
PRPF40AO75400 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.23□□□□□ -2.05
PRPF40AO75400 MIR3937-201ENST00000580135 106 ntBASIC2.23□□□□□ -2.05
PRPF40AO75400 AL096840.1-201ENST00000603287 93 ntBASIC2.23□□□□□ -2.05
PRPF40AO75400 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
PRPF40AO75400 Y_RNA.81-201ENST00000362997 102 ntBASIC2.22□□□□□ -2.05
PRPF40AO75400 SNORA26.6-201ENST00000391256 115 ntBASIC2.22□□□□□ -2.05
PRPF40AO75400 POLR2J4-204ENST00000418424 324 ntBASIC2.22□□□□□ -2.05
PRPF40AO75400 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PRPF40AO75400 AC022523.2-201ENST00000561045 150 ntBASIC2.22□□□□□ -2.05
PRPF40AO75400 CYP3A52P-201ENST00000563326 91 ntBASIC2.22□□□□□ -2.05
PRPF40AO75400 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.22□□□□□ -2.05
PRPF40AO75400 AL391516.1-201ENST00000554380 2449 ntBASIC2.22□□□□□ -2.05
PRPF40AO75400 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRPF40AO75400 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PRPF40AO75400 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
PRPF40AO75400 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
PRPF40AO75400 Y_RNA.35-201ENST00000362601 101 ntBASIC2.21□□□□□ -2.06
PRPF40AO75400 RNY4P6-201ENST00000363667 96 ntBASIC2.21□□□□□ -2.06
PRPF40AO75400 SNORD1A-201ENST00000364968 72 ntBASIC2.21□□□□□ -2.06
PRPF40AO75400 Y_RNA.430-201ENST00000384081 110 ntBASIC2.21□□□□□ -2.06
PRPF40AO75400 AC004812.1-201ENST00000540773 146 ntBASIC2.21□□□□□ -2.06
PRPF40AO75400 AC007012.1-201ENST00000567192 175 ntBASIC2.21□□□□□ -2.06
PRPF40AO75400 MIR3163-201ENST00000581592 73 ntBASIC2.21□□□□□ -2.06
PRPF40AO75400 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PRPF40AO75400 MIR302D-201ENST00000362275 68 ntBASIC2.2□□□□□ -2.06
PRPF40AO75400 Y_RNA.531-201ENST00000384589 121 ntBASIC2.2□□□□□ -2.06
PRPF40AO75400 MIR504-201ENST00000385065 83 ntBASIC2.2□□□□□ -2.06
PRPF40AO75400 MIR1289-2-201ENST00000408360 111 ntBASIC2.2□□□□□ -2.06
PRPF40AO75400 AL512326.2-201ENST00000426359 151 ntBASIC2.2□□□□□ -2.06
PRPF40AO75400 Y_RNA.709-201ENST00000516952 92 ntBASIC2.2□□□□□ -2.06
PRPF40AO75400 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.2□□□□□ -2.06
PRPF40AO75400 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.2□□□□□ -2.06
PRPF40AO75400 MIR548AO-201ENST00000579992 96 ntBASIC2.2□□□□□ -2.06
PRPF40AO75400 MIR7843-201ENST00000622274 79 ntBASIC2.2□□□□□ -2.06
PRPF40AO75400 MIR6841-201ENST00000637129 72 ntBASIC2.2□□□□□ -2.06
PRPF40AO75400 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
PRPF40AO75400 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
PRPF40AO75400 Y_RNA.171-201ENST00000363760 102 ntBASIC2.19□□□□□ -2.06
PRPF40AO75400 Y_RNA.354-201ENST00000365448 111 ntBASIC2.19□□□□□ -2.06
PRPF40AO75400 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.19□□□□□ -2.06
PRPF40AO75400 AL096861.1-201ENST00000610899 123 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 495.7 ms