Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SNRPGP12-201ENST00000449481 213 ntBASIC3.27□□□□□ -1.89
RNF40O75150 snoU13.11-201ENST00000459219 104 ntBASIC3.27□□□□□ -1.89
RNF40O75150 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF40O75150 AL512598.1-201ENST00000610158 273 ntBASIC3.27□□□□□ -1.89
RNF40O75150 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF40O75150 SNORD115-3-201ENST00000363100 82 ntBASIC3.26□□□□□ -1.89
RNF40O75150 SNORA5B-201ENST00000363786 132 ntBASIC3.26□□□□□ -1.89
RNF40O75150 Y_RNA.386-201ENST00000383913 105 ntBASIC3.26□□□□□ -1.89
RNF40O75150 MIR520H-201ENST00000385126 88 ntBASIC3.26□□□□□ -1.89
RNF40O75150 MIR29C-201ENST00000385231 88 ntBASIC3.26□□□□□ -1.89
RNF40O75150 RNU4-83P-201ENST00000410863 133 ntBASIC3.26□□□□□ -1.89
RNF40O75150 SNORA74.3-201ENST00000517108 154 ntBASIC3.26□□□□□ -1.89
RNF40O75150 AC026271.5-201ENST00000577873 130 ntBASIC3.26□□□□□ -1.89
RNF40O75150 MIR2682-201ENST00000580305 110 ntBASIC3.26□□□□□ -1.89
RNF40O75150 UBL5P2-201ENST00000583788 219 ntBASIC3.26□□□□□ -1.89
RNF40O75150 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RNF40O75150 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF40O75150 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF40O75150 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF40O75150 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF40O75150 SNORD21-201ENST00000383953 95 ntBASIC3.25□□□□□ -1.89
RNF40O75150 RN7SL499P-201ENST00000481141 276 ntBASIC3.25□□□□□ -1.89
RNF40O75150 SNORA31.26-201ENST00000517250 137 ntBASIC3.25□□□□□ -1.89
RNF40O75150 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF40O75150 MIR8066-201ENST00000617280 78 ntBASIC3.25□□□□□ -1.89
RNF40O75150 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNF40O75150 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.25□□□□□ -1.89
RNF40O75150 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF40O75150 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF40O75150 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
RNF40O75150 U8.9-201ENST00000365667 134 ntBASIC3.24□□□□□ -1.89
RNF40O75150 SNORA7.4-201ENST00000384249 137 ntBASIC3.24□□□□□ -1.89
RNF40O75150 RNU6-1067P-201ENST00000384752 107 ntBASIC3.24□□□□□ -1.89
RNF40O75150 RNA5SP437-201ENST00000517249 129 ntBASIC3.24□□□□□ -1.89
RNF40O75150 MIR4796-201ENST00000580742 81 ntBASIC3.24□□□□□ -1.89
RNF40O75150 AC022202.1-201ENST00000613515 211 ntBASIC3.24□□□□□ -1.89
RNF40O75150 AL355596.1-201ENST00000565399 3996 ntBASIC3.24□□□□□ -1.89
RNF40O75150 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF40O75150 WWP1P1-201ENST00000466609 2769 ntBASIC3.23□□□□□ -1.89
RNF40O75150 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.23□□□□□ -1.89
RNF40O75150 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF40O75150 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF40O75150 SNORA38-201ENST00000363946 132 ntBASIC3.23□□□□□ -1.89
RNF40O75150 RNY1P2-201ENST00000364820 117 ntBASIC3.23□□□□□ -1.89
RNF40O75150 Y_RNA.508-201ENST00000384502 114 ntBASIC3.23□□□□□ -1.89
RNF40O75150 AC011753.1-201ENST00000451001 220 ntBASIC3.23□□□□□ -1.89
RNF40O75150 Y_RNA.648-201ENST00000459455 110 ntBASIC3.23□□□□□ -1.89
RNF40O75150 AC005908.1-201ENST00000468701 347 ntBASIC3.23□□□□□ -1.89
RNF40O75150 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF40O75150 FGF7P7-201ENST00000514120 227 ntBASIC3.23□□□□□ -1.89
RNF40O75150 RNU6-871P-201ENST00000516122 100 ntBASIC3.23□□□□□ -1.89
RNF40O75150 AC008133.2-201ENST00000624540 351 ntBASIC3.23□□□□□ -1.89
RNF40O75150 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF40O75150 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
RNF40O75150 Y_RNA.340-201ENST00000365330 92 ntBASIC3.22□□□□□ -1.89
RNF40O75150 RNU1-109P-201ENST00000383960 147 ntBASIC3.22□□□□□ -1.89
RNF40O75150 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF40O75150 AC125388.1-201ENST00000459631 156 ntBASIC3.22□□□□□ -1.89
RNF40O75150 RPS29P11-201ENST00000496507 171 ntBASIC3.22□□□□□ -1.89
RNF40O75150 Y_RNA.660-201ENST00000516002 120 ntBASIC3.22□□□□□ -1.89
RNF40O75150 RNU7-43P-201ENST00000516554 64 ntBASIC3.22□□□□□ -1.89
RNF40O75150 CYP3A52P-201ENST00000563326 91 ntBASIC3.22□□□□□ -1.89
RNF40O75150 AC141846.1-201ENST00000568348 142 ntBASIC3.22□□□□□ -1.89
RNF40O75150 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.22□□□□□ -1.89
RNF40O75150 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF40O75150 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.21□□□□□ -1.89
RNF40O75150 MIR597-201ENST00000384968 97 ntBASIC3.21□□□□□ -1.9
RNF40O75150 MIR1283-2-201ENST00000408621 87 ntBASIC3.21□□□□□ -1.9
RNF40O75150 SNORD88.1-201ENST00000408684 91 ntBASIC3.21□□□□□ -1.9
RNF40O75150 RNU6-634P-201ENST00000459134 106 ntBASIC3.21□□□□□ -1.9
RNF40O75150 RNU6-687P-201ENST00000516443 89 ntBASIC3.21□□□□□ -1.9
RNF40O75150 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF40O75150 AC006023.1-201ENST00000603944 259 ntBASIC3.21□□□□□ -1.9
RNF40O75150 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RNF40O75150 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RNF40O75150 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF40O75150 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.2□□□□□ -1.9
RNF40O75150 RNU6-161P-201ENST00000363051 106 ntBASIC3.2□□□□□ -1.9
RNF40O75150 SNORA71.1-201ENST00000364523 117 ntBASIC3.2□□□□□ -1.9
RNF40O75150 RN7SL633P-201ENST00000488974 297 ntBASIC3.2□□□□□ -1.9
RNF40O75150 MIR548AO-201ENST00000579992 96 ntBASIC3.2□□□□□ -1.9
RNF40O75150 AC090897.1-201ENST00000580909 226 ntBASIC3.2□□□□□ -1.9
RNF40O75150 MIR4672-201ENST00000583126 81 ntBASIC3.2□□□□□ -1.9
RNF40O75150 AP000753.3-201ENST00000604083 169 ntBASIC3.2□□□□□ -1.9
RNF40O75150 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.2□□□□□ -1.9
RNF40O75150 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RNF40O75150 SNORA54-201ENST00000384281 123 ntBASIC3.19□□□□□ -1.9
RNF40O75150 RNA5SP292-201ENST00000390974 118 ntBASIC3.19□□□□□ -1.9
RNF40O75150 AC019129.1-201ENST00000403786 261 ntBASIC3.19□□□□□ -1.9
RNF40O75150 RNU6-448P-201ENST00000517052 107 ntBASIC3.19□□□□□ -1.9
RNF40O75150 AC133485.1-201ENST00000567176 124 ntBASIC3.19□□□□□ -1.9
RNF40O75150 AL662814.1-201ENST00000617364 121 ntBASIC3.19□□□□□ -1.9
RNF40O75150 RNU6-296P-201ENST00000384608 107 ntBASIC3.18□□□□□ -1.9
RNF40O75150 RNU6-380P-201ENST00000410207 107 ntBASIC3.18□□□□□ -1.9
RNF40O75150 RNA5SP274-201ENST00000410484 108 ntBASIC3.18□□□□□ -1.9
RNF40O75150 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF40O75150 AC022018.1-201ENST00000430685 241 ntBASIC3.18□□□□□ -1.9
RNF40O75150 RPS29P6-201ENST00000438196 145 ntBASIC3.18□□□□□ -1.9
RNF40O75150 RNU6-1108P-201ENST00000516308 104 ntBASIC3.18□□□□□ -1.9
RNF40O75150 RNVU1-2-201ENST00000516326 135 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms