Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 RPS29P24-201ENST00000486345 171 ntBASIC2.32□□□□□ -2.04
ZNRF3Q9ULT6 RPS26P48-201ENST00000491713 339 ntBASIC2.32□□□□□ -2.04
ZNRF3Q9ULT6 AL773524.1-201ENST00000614065 229 ntBASIC2.32□□□□□ -2.04
ZNRF3Q9ULT6 AL137067.1-201ENST00000615933 120 ntBASIC2.32□□□□□ -2.04
ZNRF3Q9ULT6 AC091932.4-201ENST00000623386 200 ntBASIC2.32□□□□□ -2.04
ZNRF3Q9ULT6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
ZNRF3Q9ULT6 RNU6-661P-201ENST00000362409 107 ntBASIC2.31□□□□□ -2.04
ZNRF3Q9ULT6 Y_RNA.346-201ENST00000365385 112 ntBASIC2.31□□□□□ -2.04
ZNRF3Q9ULT6 Y_RNA.353-201ENST00000365440 108 ntBASIC2.31□□□□□ -2.04
ZNRF3Q9ULT6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.31□□□□□ -2.04
ZNRF3Q9ULT6 RPL23AP6-201ENST00000446637 472 ntBASIC2.31□□□□□ -2.04
ZNRF3Q9ULT6 RNU6-240P-201ENST00000516098 97 ntBASIC2.31□□□□□ -2.04
ZNRF3Q9ULT6 AC025166.1-201ENST00000612411 163 ntBASIC2.31□□□□□ -2.04
ZNRF3Q9ULT6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ZNRF3Q9ULT6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ZNRF3Q9ULT6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 MIR337-201ENST00000362281 93 ntBASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 Y_RNA.366-201ENST00000365540 102 ntBASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 RNU6-1064P-201ENST00000410626 104 ntBASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 SNORD123-201ENST00000459473 70 ntBASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 RNU6-998P-201ENST00000515894 101 ntBASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 RNU6-781P-201ENST00000516377 101 ntBASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 SUMO2P16-201ENST00000519475 264 ntBASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 MTND5P34-201ENST00000568888 325 ntBASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 AC002984.1-201ENST00000591692 448 ntBASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 AC084768.2-201ENST00000622736 221 ntBASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 AC106754.2-201ENST00000623006 233 ntBASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ZNRF3Q9ULT6 MIRLET7G-201ENST00000362280 84 ntBASIC2.29□□□□□ -2.04
ZNRF3Q9ULT6 SNORA6-201ENST00000384033 151 ntBASIC2.29□□□□□ -2.04
ZNRF3Q9ULT6 RNU6-476P-201ENST00000384726 107 ntBASIC2.29□□□□□ -2.04
ZNRF3Q9ULT6 RNU6-1067P-201ENST00000384752 107 ntBASIC2.29□□□□□ -2.04
ZNRF3Q9ULT6 MIR9-3-201ENST00000385084 90 ntBASIC2.29□□□□□ -2.04
ZNRF3Q9ULT6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ZNRF3Q9ULT6 MIR1263-201ENST00000408324 86 ntBASIC2.29□□□□□ -2.04
ZNRF3Q9ULT6 AC004965.1-201ENST00000413033 213 ntBASIC2.29□□□□□ -2.04
ZNRF3Q9ULT6 JTBP1-201ENST00000441314 247 ntBASIC2.29□□□□□ -2.04
ZNRF3Q9ULT6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
ZNRF3Q9ULT6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ZNRF3Q9ULT6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
ZNRF3Q9ULT6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
ZNRF3Q9ULT6 RNU4-62P-201ENST00000410125 130 ntBASIC2.28□□□□□ -2.04
ZNRF3Q9ULT6 Y_RNA.630-201ENST00000411370 108 ntBASIC2.28□□□□□ -2.04
ZNRF3Q9ULT6 AP1B1P2-201ENST00000416196 106 ntBASIC2.28□□□□□ -2.04
ZNRF3Q9ULT6 RNU6-322P-201ENST00000516010 103 ntBASIC2.28□□□□□ -2.04
ZNRF3Q9ULT6 SNORD33.1-201ENST00000516213 88 ntBASIC2.28□□□□□ -2.04
ZNRF3Q9ULT6 RNU6-250P-201ENST00000516958 103 ntBASIC2.28□□□□□ -2.04
ZNRF3Q9ULT6 AL670379.3-201ENST00000605040 251 ntBASIC2.28□□□□□ -2.04
ZNRF3Q9ULT6 AL121890.5-201ENST00000620848 304 ntBASIC2.28□□□□□ -2.04
ZNRF3Q9ULT6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
ZNRF3Q9ULT6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
ZNRF3Q9ULT6 RNA5SP259-201ENST00000365541 109 ntBASIC2.27□□□□□ -2.05
ZNRF3Q9ULT6 RNU6-439P-201ENST00000384188 106 ntBASIC2.27□□□□□ -2.05
ZNRF3Q9ULT6 MIR513A1-201ENST00000385138 129 ntBASIC2.27□□□□□ -2.05
ZNRF3Q9ULT6 RNA5SP136-201ENST00000410906 107 ntBASIC2.27□□□□□ -2.05
ZNRF3Q9ULT6 MTATP6P29-201ENST00000415057 132 ntBASIC2.27□□□□□ -2.05
ZNRF3Q9ULT6 RNU7-67P-201ENST00000459003 62 ntBASIC2.27□□□□□ -2.05
ZNRF3Q9ULT6 MIR4713-201ENST00000582691 75 ntBASIC2.27□□□□□ -2.05
ZNRF3Q9ULT6 AC021443.1-201ENST00000604478 211 ntBASIC2.27□□□□□ -2.05
ZNRF3Q9ULT6 AL359821.1-201ENST00000605519 182 ntBASIC2.27□□□□□ -2.05
ZNRF3Q9ULT6 MIR8081-201ENST00000611533 95 ntBASIC2.27□□□□□ -2.05
ZNRF3Q9ULT6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.27□□□□□ -2.05
ZNRF3Q9ULT6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ZNRF3Q9ULT6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
ZNRF3Q9ULT6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ZNRF3Q9ULT6 RNU6-349P-201ENST00000362402 107 ntBASIC2.26□□□□□ -2.05
ZNRF3Q9ULT6 RNU6-1144P-201ENST00000384247 104 ntBASIC2.26□□□□□ -2.05
ZNRF3Q9ULT6 Y_RNA.494-201ENST00000384432 111 ntBASIC2.26□□□□□ -2.05
ZNRF3Q9ULT6 SNORD20-201ENST00000384550 80 ntBASIC2.26□□□□□ -2.05
ZNRF3Q9ULT6 MIR194-1-201ENST00000384892 85 ntBASIC2.26□□□□□ -2.05
ZNRF3Q9ULT6 MIR548A3-201ENST00000385297 97 ntBASIC2.26□□□□□ -2.05
ZNRF3Q9ULT6 RNU2-11P-201ENST00000459191 187 ntBASIC2.26□□□□□ -2.05
ZNRF3Q9ULT6 RNU7-53P-201ENST00000516705 60 ntBASIC2.26□□□□□ -2.05
ZNRF3Q9ULT6 IGKV1-22-201ENST00000524313 326 ntBASIC2.26□□□□□ -2.05
ZNRF3Q9ULT6 WWP1P1-201ENST00000466609 2769 ntBASIC2.25□□□□□ -2.05
ZNRF3Q9ULT6 RNU6-1325P-201ENST00000364905 105 ntBASIC2.25□□□□□ -2.05
ZNRF3Q9ULT6 MIR144-201ENST00000384886 86 ntBASIC2.25□□□□□ -2.05
ZNRF3Q9ULT6 MIR17-201ENST00000385012 84 ntBASIC2.25□□□□□ -2.05
ZNRF3Q9ULT6 SNORA74.3-201ENST00000517108 154 ntBASIC2.25□□□□□ -2.05
ZNRF3Q9ULT6 AC022254.1-201ENST00000567857 235 ntBASIC2.25□□□□□ -2.05
ZNRF3Q9ULT6 MIR4299-201ENST00000577899 72 ntBASIC2.25□□□□□ -2.05
ZNRF3Q9ULT6 MIR548AR-201ENST00000582191 57 ntBASIC2.25□□□□□ -2.05
ZNRF3Q9ULT6 MIR8070-201ENST00000616510 88 ntBASIC2.25□□□□□ -2.05
ZNRF3Q9ULT6 MTND5P18-201ENST00000445624 1801 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 RNY1P10-201ENST00000363268 113 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 RNU4-16P-201ENST00000364737 141 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 RNU6-215P-201ENST00000365169 102 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 Y_RNA.528-201ENST00000384575 108 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 MIRLET7F2-201ENST00000385277 83 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 SNORA67.5-201ENST00000391036 107 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 RPS29P29-201ENST00000456396 171 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 RPS29P11-201ENST00000496507 171 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 TRMT112P2-201ENST00000512910 132 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 RNU6-917P-201ENST00000516294 104 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 AC095038.3-201ENST00000634439 195 ntBASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
ZNRF3Q9ULT6 Y_RNA.508-201ENST00000384502 114 ntBASIC2.23□□□□□ -2.05
ZNRF3Q9ULT6 MIR499A-201ENST00000384903 122 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms