Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AL020996.3-201ENST00000606617 222 ntBASIC2.22□□□□□ -2.05
VTI1BQ9UEU0 AC046143.2-201ENST00000609789 160 ntBASIC2.22□□□□□ -2.05
VTI1BQ9UEU0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VTI1BQ9UEU0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.05
VTI1BQ9UEU0 RNU6-1319P-201ENST00000390855 104 ntBASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 RNU6-747P-201ENST00000390928 104 ntBASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 RNU6-241P-201ENST00000391148 104 ntBASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 RNU6-177P-201ENST00000411257 104 ntBASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 RNU7-164P-201ENST00000459221 62 ntBASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 RNU7-45P-201ENST00000459460 63 ntBASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 AC090255.1-201ENST00000495779 349 ntBASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 AC079140.2-201ENST00000506193 142 ntBASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 SNORD33.1-201ENST00000516213 88 ntBASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 RNY4P20-201ENST00000516678 93 ntBASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 MIR4513-201ENST00000581077 86 ntBASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 MIR4251-201ENST00000635819 61 ntBASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
VTI1BQ9UEU0 RNA5SP48-201ENST00000363969 126 ntBASIC2.2□□□□□ -2.06
VTI1BQ9UEU0 Y_RNA.298-201ENST00000364960 107 ntBASIC2.2□□□□□ -2.06
VTI1BQ9UEU0 RNA5SP144-201ENST00000410846 116 ntBASIC2.2□□□□□ -2.06
VTI1BQ9UEU0 COX6CP6-201ENST00000490840 228 ntBASIC2.2□□□□□ -2.06
VTI1BQ9UEU0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.2□□□□□ -2.06
VTI1BQ9UEU0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.2□□□□□ -2.06
VTI1BQ9UEU0 MTND5P18-201ENST00000445624 1801 ntBASIC2.19□□□□□ -2.06
VTI1BQ9UEU0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
VTI1BQ9UEU0 RNA5SP289-201ENST00000362332 137 ntBASIC2.19□□□□□ -2.06
VTI1BQ9UEU0 Y_RNA.528-201ENST00000384575 108 ntBASIC2.19□□□□□ -2.06
VTI1BQ9UEU0 SNORA26.6-201ENST00000391256 115 ntBASIC2.19□□□□□ -2.06
VTI1BQ9UEU0 RNU6-1190P-201ENST00000410811 104 ntBASIC2.19□□□□□ -2.06
VTI1BQ9UEU0 AC008834.1-201ENST00000511612 175 ntBASIC2.19□□□□□ -2.06
VTI1BQ9UEU0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.19□□□□□ -2.06
VTI1BQ9UEU0 AC019176.1-201ENST00000518519 225 ntBASIC2.19□□□□□ -2.06
VTI1BQ9UEU0 MIR3152-201ENST00000579801 74 ntBASIC2.19□□□□□ -2.06
VTI1BQ9UEU0 AC009831.4-201ENST00000620744 325 ntBASIC2.19□□□□□ -2.06
VTI1BQ9UEU0 AL359851.1-201ENST00000569460 4997 ntBASIC2.19□□□□□ -2.06
VTI1BQ9UEU0 RNU6-1056P-201ENST00000383996 107 ntBASIC2.18□□□□□ -2.06
VTI1BQ9UEU0 RNU6-1065P-201ENST00000384513 106 ntBASIC2.18□□□□□ -2.06
VTI1BQ9UEU0 RNU7-123P-201ENST00000515911 60 ntBASIC2.18□□□□□ -2.06
VTI1BQ9UEU0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.18□□□□□ -2.06
VTI1BQ9UEU0 AL670379.3-201ENST00000605040 251 ntBASIC2.18□□□□□ -2.06
VTI1BQ9UEU0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.18□□□□□ -2.06
VTI1BQ9UEU0 AL096861.1-201ENST00000610899 123 ntBASIC2.18□□□□□ -2.06
VTI1BQ9UEU0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 RNU6-476P-201ENST00000384726 107 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 RNU6-1064P-201ENST00000410626 104 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 RNU4-53P-201ENST00000410828 140 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 POLR2J4-204ENST00000418424 324 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 AC027119.1-201ENST00000440877 241 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 RNU6-893P-201ENST00000458841 100 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 RNU2-35P-201ENST00000516446 142 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 MIR3937-201ENST00000580135 106 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 MIR3192-201ENST00000584920 77 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 MIR6717-201ENST00000622747 73 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 MIR6841-201ENST00000637129 72 ntBASIC2.17□□□□□ -2.06
VTI1BQ9UEU0 Y_RNA.430-201ENST00000384081 110 ntBASIC2.16□□□□□ -2.06
VTI1BQ9UEU0 RNU6-1144P-201ENST00000384247 104 ntBASIC2.16□□□□□ -2.06
VTI1BQ9UEU0 RNA5SP489-201ENST00000410986 109 ntBASIC2.16□□□□□ -2.06
VTI1BQ9UEU0 AL022718.1-201ENST00000412004 84 ntBASIC2.16□□□□□ -2.06
VTI1BQ9UEU0 RPL39P39-201ENST00000455840 151 ntBASIC2.16□□□□□ -2.06
VTI1BQ9UEU0 RPL30P7-201ENST00000479312 323 ntBASIC2.16□□□□□ -2.06
VTI1BQ9UEU0 RPL23AP94-201ENST00000512518 302 ntBASIC2.16□□□□□ -2.06
VTI1BQ9UEU0 AL590808.1-201ENST00000618696 141 ntBASIC2.16□□□□□ -2.06
VTI1BQ9UEU0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
VTI1BQ9UEU0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
VTI1BQ9UEU0 SNORA22.1-201ENST00000362701 134 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 SNORA1.1-201ENST00000364671 133 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 RNU6-301P-201ENST00000384277 107 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 HMGN1P33-201ENST00000432945 451 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 RNA5SP200-201ENST00000516360 103 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 RNA5SP281-201ENST00000516504 135 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 MTND5P34-201ENST00000568888 325 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 MIR548AO-201ENST00000579992 96 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 MIR4435-1-201ENST00000582552 80 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 MIR3935-201ENST00000583472 104 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 MIR8055-201ENST00000610739 97 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 AL121890.5-201ENST00000620848 304 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 Z97988.1-201ENST00000637697 135 ntBASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.15□□□□□ -2.07
VTI1BQ9UEU0 Y_RNA.198-201ENST00000364013 98 ntBASIC2.14□□□□□ -2.07
VTI1BQ9UEU0 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
VTI1BQ9UEU0 MIR548A3-201ENST00000385297 97 ntBASIC2.14□□□□□ -2.07
VTI1BQ9UEU0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.14□□□□□ -2.07
VTI1BQ9UEU0 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
VTI1BQ9UEU0 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
VTI1BQ9UEU0 SNRPGP19-201ENST00000603826 189 ntBASIC2.14□□□□□ -2.07
VTI1BQ9UEU0 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
VTI1BQ9UEU0 ZNF658B-202ENST00000615961 3375 ntBASIC2.13□□□□□ -2.07
VTI1BQ9UEU0 Y_RNA.213-201ENST00000364178 111 ntBASIC2.13□□□□□ -2.07
VTI1BQ9UEU0 RNA5SP508-201ENST00000411327 119 ntBASIC2.13□□□□□ -2.07
VTI1BQ9UEU0 RPS3AP1-201ENST00000413190 320 ntBASIC2.13□□□□□ -2.07
VTI1BQ9UEU0 AC009474.2-201ENST00000451383 136 ntBASIC2.13□□□□□ -2.07
VTI1BQ9UEU0 MIR4422-201ENST00000581938 83 ntBASIC2.13□□□□□ -2.07
VTI1BQ9UEU0 RNU1-78P-201ENST00000391248 165 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms