Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 AC104435.1-201ENST00000483483 166 ntBASIC2.21□□□□□ -2.06
UBP1Q9NZI7 RNA5SP82-201ENST00000516707 92 ntBASIC2.21□□□□□ -2.06
UBP1Q9NZI7 AC103810.8-201ENST00000607347 118 ntBASIC2.21□□□□□ -2.06
UBP1Q9NZI7 MIR6129-201ENST00000616087 109 ntBASIC2.21□□□□□ -2.06
UBP1Q9NZI7 AC008133.2-201ENST00000624540 351 ntBASIC2.21□□□□□ -2.06
UBP1Q9NZI7 AC092881.1-201ENST00000638218 2733 ntBASIC2.21□□□□□ -2.06
UBP1Q9NZI7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
UBP1Q9NZI7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
UBP1Q9NZI7 SNORD116-21-201ENST00000384507 92 ntBASIC2.2□□□□□ -2.06
UBP1Q9NZI7 RNU6-429P-201ENST00000384582 108 ntBASIC2.2□□□□□ -2.06
UBP1Q9NZI7 MIR144-201ENST00000384886 86 ntBASIC2.2□□□□□ -2.06
UBP1Q9NZI7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
UBP1Q9NZI7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.2□□□□□ -2.06
UBP1Q9NZI7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.2□□□□□ -2.06
UBP1Q9NZI7 RNU4-16P-201ENST00000364737 141 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 RNU6-880P-201ENST00000384526 107 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 MIR1261-201ENST00000408659 82 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 RNA5SP144-201ENST00000410846 116 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 AL022718.1-201ENST00000412004 84 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 AL356379.1-201ENST00000414105 126 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 RNU7-123P-201ENST00000515911 60 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 SNORA31.4-201ENST00000516049 129 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 HSPE1P19-201ENST00000603327 295 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 AL357312.1-201ENST00000603879 298 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 MIR6715A-201ENST00000615929 79 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 MIR6873-201ENST00000622788 63 ntBASIC2.19□□□□□ -2.06
UBP1Q9NZI7 MIR30A-201ENST00000385092 71 ntBASIC2.18□□□□□ -2.06
UBP1Q9NZI7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.18□□□□□ -2.06
UBP1Q9NZI7 RNU6-589P-201ENST00000516485 107 ntBASIC2.18□□□□□ -2.06
UBP1Q9NZI7 Y_RNA.709-201ENST00000516952 92 ntBASIC2.18□□□□□ -2.06
UBP1Q9NZI7 AL020996.3-201ENST00000606617 222 ntBASIC2.18□□□□□ -2.06
UBP1Q9NZI7 MIR6132-201ENST00000622083 109 ntBASIC2.18□□□□□ -2.06
UBP1Q9NZI7 Y_RNA.430-201ENST00000384081 110 ntBASIC2.17□□□□□ -2.06
UBP1Q9NZI7 Z98742.3-201ENST00000418637 326 ntBASIC2.17□□□□□ -2.06
UBP1Q9NZI7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.17□□□□□ -2.06
UBP1Q9NZI7 snoU13.9-201ENST00000458927 103 ntBASIC2.17□□□□□ -2.06
UBP1Q9NZI7 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
UBP1Q9NZI7 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.17□□□□□ -2.06
UBP1Q9NZI7 MIR3945-201ENST00000581853 98 ntBASIC2.17□□□□□ -2.06
UBP1Q9NZI7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.17□□□□□ -2.06
UBP1Q9NZI7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.17□□□□□ -2.06
UBP1Q9NZI7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
UBP1Q9NZI7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.16□□□□□ -2.06
UBP1Q9NZI7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
UBP1Q9NZI7 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
UBP1Q9NZI7 SNORD33-201ENST00000362761 85 ntBASIC2.16□□□□□ -2.06
UBP1Q9NZI7 RNU2-35P-201ENST00000516446 142 ntBASIC2.16□□□□□ -2.06
UBP1Q9NZI7 MIR5002-201ENST00000584713 97 ntBASIC2.16□□□□□ -2.06
UBP1Q9NZI7 MIR6840-201ENST00000611937 71 ntBASIC2.16□□□□□ -2.06
UBP1Q9NZI7 WWP1P1-201ENST00000466609 2769 ntBASIC2.16□□□□□ -2.06
UBP1Q9NZI7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
UBP1Q9NZI7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
UBP1Q9NZI7 RNY4P6-201ENST00000363667 96 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 SNORA67.3-201ENST00000384366 140 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 MIR548A1-201ENST00000385041 97 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 SNORD41-201ENST00000386967 70 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
UBP1Q9NZI7 RNU6-913P-201ENST00000390913 95 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 SNORA26.6-201ENST00000391256 115 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 RNU6-922P-201ENST00000516753 99 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 RNU6-250P-201ENST00000516958 103 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 AC121758.2-201ENST00000553271 193 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 AC104984.5-201ENST00000586878 94 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 GHRLOS.1-201ENST00000610995 70 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 MIR6717-201ENST00000622747 73 ntBASIC2.15□□□□□ -2.07
UBP1Q9NZI7 U8.2-201ENST00000363156 134 ntBASIC2.14□□□□□ -2.07
UBP1Q9NZI7 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
UBP1Q9NZI7 SNORA3.2-201ENST00000408221 125 ntBASIC2.14□□□□□ -2.07
UBP1Q9NZI7 POLR2J4-204ENST00000418424 324 ntBASIC2.14□□□□□ -2.07
UBP1Q9NZI7 RNU7-45P-201ENST00000459460 63 ntBASIC2.14□□□□□ -2.07
UBP1Q9NZI7 SNORD111.1-201ENST00000516421 86 ntBASIC2.14□□□□□ -2.07
UBP1Q9NZI7 RNU6-412P-201ENST00000516434 106 ntBASIC2.14□□□□□ -2.07
UBP1Q9NZI7 MIR3198-2-201ENST00000577868 80 ntBASIC2.14□□□□□ -2.07
UBP1Q9NZI7 AL590808.1-201ENST00000618696 141 ntBASIC2.14□□□□□ -2.07
UBP1Q9NZI7 MIR4251-201ENST00000635819 61 ntBASIC2.14□□□□□ -2.07
UBP1Q9NZI7 MIR6841-201ENST00000637129 72 ntBASIC2.14□□□□□ -2.07
UBP1Q9NZI7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.14□□□□□ -2.07
UBP1Q9NZI7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
UBP1Q9NZI7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
UBP1Q9NZI7 Y_RNA.35-201ENST00000362601 101 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 SNORA22.1-201ENST00000362701 134 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 RNA5SP48-201ENST00000363969 126 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 RNU6-44P-201ENST00000384045 107 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 SNORA64-201ENST00000384674 134 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 RNY4P18-201ENST00000391107 89 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 HMGN2P23-201ENST00000456759 269 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 AC007012.1-201ENST00000567192 175 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 MIR4679-2-201ENST00000578358 77 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 MIR3163-201ENST00000581592 73 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 AL096840.1-201ENST00000603287 93 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 MIR8055-201ENST00000610739 97 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 AC064859.1-201ENST00000624741 174 ntBASIC2.13□□□□□ -2.07
UBP1Q9NZI7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
UBP1Q9NZI7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
UBP1Q9NZI7 MIR302D-201ENST00000362275 68 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms