Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 MIR4666B-201ENST00000578142 81 ntBASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 AC092881.1-201ENST00000638218 2733 ntBASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 Y_RNA.171-201ENST00000363760 102 ntBASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 SNORA67.1-201ENST00000364749 141 ntBASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 AL627390.1-201ENST00000396055 340 ntBASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 SNORA7.5-201ENST00000410672 110 ntBASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 RNU2-63P-201ENST00000410792 194 ntBASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 MRPL35P3-201ENST00000421557 364 ntBASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 RNU7-45P-201ENST00000459460 63 ntBASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 RNU7-171P-201ENST00000459581 62 ntBASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 MIR6132-201ENST00000622083 109 ntBASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 AC021613.1-201ENST00000623880 111 ntBASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SMPD4Q9NXE4 AL442644.1-201ENST00000454390 3105 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 Y_RNA.95-201ENST00000363079 95 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 SNORA38-201ENST00000363946 132 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 RNU6-1296P-201ENST00000383879 107 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 Y_RNA.437-201ENST00000384113 113 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 RNU1-52P-201ENST00000384190 164 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 SNORA27-201ENST00000384323 126 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 MIR1289-2-201ENST00000408360 111 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 RNU6-998P-201ENST00000515894 101 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 MIR7843-201ENST00000622274 79 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 AC005336.3-201ENST00000623833 2679 ntBASIC2.26□□□□□ -2.05
SMPD4Q9NXE4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.25□□□□□ -2.05
SMPD4Q9NXE4 RNU6-862P-201ENST00000362804 105 ntBASIC2.25□□□□□ -2.05
SMPD4Q9NXE4 RNU6-1201P-201ENST00000384227 107 ntBASIC2.25□□□□□ -2.05
SMPD4Q9NXE4 RNU6-616P-201ENST00000384353 107 ntBASIC2.25□□□□□ -2.05
SMPD4Q9NXE4 SNORD116-22-201ENST00000384430 92 ntBASIC2.25□□□□□ -2.05
SMPD4Q9NXE4 AL022718.1-201ENST00000412004 84 ntBASIC2.25□□□□□ -2.05
SMPD4Q9NXE4 RNU7-94P-201ENST00000459576 63 ntBASIC2.25□□□□□ -2.05
SMPD4Q9NXE4 AC114811.1-201ENST00000507207 168 ntBASIC2.25□□□□□ -2.05
SMPD4Q9NXE4 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.25□□□□□ -2.05
SMPD4Q9NXE4 MIR4778-201ENST00000577635 80 ntBASIC2.25□□□□□ -2.05
SMPD4Q9NXE4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.25□□□□□ -2.05
SMPD4Q9NXE4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMPD4Q9NXE4 Y_RNA.241-201ENST00000364470 117 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 Y_RNA.377-201ENST00000365644 108 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 Y_RNA.470-201ENST00000384307 117 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 SNORA18-201ENST00000384416 132 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 MIR1262-201ENST00000408276 93 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 Y_RNA.620-201ENST00000411009 88 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 SRIP3-201ENST00000413200 219 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 AL035398.1-201ENST00000430869 322 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 CYP2C59P-201ENST00000457790 269 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 RNU2-11P-201ENST00000459191 187 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 CKS1BP2-201ENST00000497342 240 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 RPL23AP63-201ENST00000498752 471 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 AC024995.1-201ENST00000523014 93 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 AC090821.2-201ENST00000523552 176 ntBASIC2.24□□□□□ -2.05
SMPD4Q9NXE4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 MIRLET7C-201ENST00000362160 84 ntBASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 SNORD114-1-201ENST00000362705 72 ntBASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 SNORD45B-201ENST00000364617 72 ntBASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 RNA5SP109-201ENST00000391010 116 ntBASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 RNU6-887P-201ENST00000410660 100 ntBASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 RNU4-69P-201ENST00000410677 143 ntBASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 CST2P1-201ENST00000425770 87 ntBASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 AC069257.2-201ENST00000441819 155 ntBASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 UBL5P3-201ENST00000475112 231 ntBASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 RNA5SP200-201ENST00000516360 103 ntBASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 MIR4668-201ENST00000582284 70 ntBASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SMPD4Q9NXE4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 MIR144-201ENST00000384886 86 ntBASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 MIR504-201ENST00000385065 83 ntBASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 RNA5SP482-201ENST00000391269 118 ntBASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 AC245047.3-201ENST00000429428 127 ntBASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 RNU7-96P-201ENST00000459535 64 ntBASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 Y_RNA.659-201ENST00000515994 113 ntBASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 Y_RNA.705-201ENST00000516862 110 ntBASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 RNU7-181P-201ENST00000517234 74 ntBASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 MIR548AE2-201ENST00000583456 67 ntBASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 AL355297.2-201ENST00000604792 129 ntBASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 AC022513.1-201ENST00000624512 117 ntBASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 AC006160.2-201ENST00000637708 154 ntBASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.22□□□□□ -2.05
SMPD4Q9NXE4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SMPD4Q9NXE4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.21□□□□□ -2.06
SMPD4Q9NXE4 MIR515-2-201ENST00000384883 83 ntBASIC2.21□□□□□ -2.06
SMPD4Q9NXE4 MIR515-1-201ENST00000384884 83 ntBASIC2.21□□□□□ -2.06
SMPD4Q9NXE4 RNU2-40P-201ENST00000410833 196 ntBASIC2.21□□□□□ -2.06
SMPD4Q9NXE4 AC003685.2-201ENST00000422795 395 ntBASIC2.21□□□□□ -2.06
SMPD4Q9NXE4 HMGN2P3-201ENST00000433603 273 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 259.2 ms