Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CUEDC1Q9NWM3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CUEDC1Q9NWM3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CUEDC1Q9NWM3 MAPK10-266ENST00000641066 6555 ntBASIC3.02□□□□□ -1.93
CUEDC1Q9NWM3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 MIR449A-201ENST00000362113 91 ntBASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 SNORA7.4-201ENST00000384249 137 ntBASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 RNA5SP109-201ENST00000391010 116 ntBASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 HMGN2P39-201ENST00000398005 273 ntBASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 BX510359.4-201ENST00000423750 193 ntBASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 RNA5SP217-201ENST00000515959 91 ntBASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 RNU6-958P-201ENST00000516995 106 ntBASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 SEPT14P17-201ENST00000617978 177 ntBASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 AL137790.1-201ENST00000634283 177 ntBASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CUEDC1Q9NWM3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CUEDC1Q9NWM3 SNORA67.1-201ENST00000364749 141 ntBASIC3□□□□□ -1.93
CUEDC1Q9NWM3 MIR518A2-201ENST00000384966 87 ntBASIC3□□□□□ -1.93
CUEDC1Q9NWM3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3□□□□□ -1.93
CUEDC1Q9NWM3 SNORD67-201ENST00000390833 111 ntBASIC3□□□□□ -1.93
CUEDC1Q9NWM3 MIR548G-201ENST00000408442 89 ntBASIC3□□□□□ -1.93
CUEDC1Q9NWM3 RPL31P63-201ENST00000422565 375 ntBASIC3□□□□□ -1.93
CUEDC1Q9NWM3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3□□□□□ -1.93
CUEDC1Q9NWM3 AC007336.1-201ENST00000576365 3828 ntBASIC3□□□□□ -1.93
CUEDC1Q9NWM3 MIR4529-201ENST00000578110 78 ntBASIC3□□□□□ -1.93
CUEDC1Q9NWM3 RNU6-90P-201ENST00000606352 106 ntBASIC3□□□□□ -1.93
CUEDC1Q9NWM3 AL020996.3-201ENST00000606617 222 ntBASIC3□□□□□ -1.93
CUEDC1Q9NWM3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3□□□□□ -1.93
CUEDC1Q9NWM3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CUEDC1Q9NWM3 MIR206-201ENST00000384872 86 ntBASIC2.99□□□□□ -1.93
CUEDC1Q9NWM3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.99□□□□□ -1.93
CUEDC1Q9NWM3 AC114801.3-201ENST00000510231 177 ntBASIC2.99□□□□□ -1.93
CUEDC1Q9NWM3 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.99□□□□□ -1.93
CUEDC1Q9NWM3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.99□□□□□ -1.93
CUEDC1Q9NWM3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CUEDC1Q9NWM3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CUEDC1Q9NWM3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.99□□□□□ -1.93
CUEDC1Q9NWM3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CUEDC1Q9NWM3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CUEDC1Q9NWM3 AC093831.2-201ENST00000624393 3427 ntBASIC2.98□□□□□ -1.93
CUEDC1Q9NWM3 MIR452-201ENST00000385020 85 ntBASIC2.98□□□□□ -1.93
CUEDC1Q9NWM3 RNU7-193P-201ENST00000516723 65 ntBASIC2.98□□□□□ -1.93
CUEDC1Q9NWM3 RNU7-35P-201ENST00000517174 62 ntBASIC2.98□□□□□ -1.93
CUEDC1Q9NWM3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.98□□□□□ -1.93
CUEDC1Q9NWM3 AL033523.1-201ENST00000605153 153 ntBASIC2.98□□□□□ -1.93
CUEDC1Q9NWM3 MIR4791-201ENST00000607666 84 ntBASIC2.98□□□□□ -1.93
CUEDC1Q9NWM3 AC245884.12-201ENST00000615364 59 ntBASIC2.98□□□□□ -1.93
CUEDC1Q9NWM3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CUEDC1Q9NWM3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 RNA5SP393-201ENST00000363423 117 ntBASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 SNORD38.2-201ENST00000384470 69 ntBASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 SNORD15B-201ENST00000384714 146 ntBASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 MIR34C-201ENST00000384831 77 ntBASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 RNA5SP465-201ENST00000391195 109 ntBASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 AL034345.1-201ENST00000407768 123 ntBASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 RNU6-613P-201ENST00000410412 108 ntBASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 MIR3169-201ENST00000578032 83 ntBASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CUEDC1Q9NWM3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
CUEDC1Q9NWM3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 SNORA54-201ENST00000384281 123 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-950P-201ENST00000384651 107 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 MIR136-201ENST00000385207 82 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-447P-201ENST00000410293 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-1118P-201ENST00000410382 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-1076P-201ENST00000410397 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-355P-201ENST00000410427 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-791P-201ENST00000410467 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-705P-201ENST00000410601 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-1100P-201ENST00000410691 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-860P-201ENST00000410860 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNA5SP344-201ENST00000411081 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-1217P-201ENST00000411276 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-785P-201ENST00000411324 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 AC008885.1-201ENST00000514930 301 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-826P-201ENST00000516827 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 MIR4435-1-201ENST00000582552 80 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 U6.90-201ENST00000614007 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 U6.70-201ENST00000620287 104 ntBASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CUEDC1Q9NWM3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 AC073325.2-201ENST00000339545 159 ntBASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 Y_RNA.173-201ENST00000363776 113 ntBASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-865P-201ENST00000364772 107 ntBASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-480P-201ENST00000384332 107 ntBASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 MIR597-201ENST00000384968 97 ntBASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-129P-201ENST00000391022 107 ntBASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-1190P-201ENST00000410811 104 ntBASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 RNU1-98P-201ENST00000458992 160 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 220.5 ms