Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6-296P-201ENST00000384608 107 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 MIR526A1-201ENST00000384897 85 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 SNORA11.2-201ENST00000408318 127 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 MIR1912-201ENST00000410389 80 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 RNU6-1190P-201ENST00000410811 104 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 RNU7-113P-201ENST00000459273 62 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 RPS23P4-201ENST00000487908 423 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 DEFB131E-201ENST00000532329 154 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 MIR3618-201ENST00000580330 88 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 MIR548AR-201ENST00000582191 57 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 MIR4791-201ENST00000607666 84 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 MIR203B-201ENST00000636080 86 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 AC016717.2-201ENST00000609089 5141 ntBASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 Y_RNA.78-201ENST00000362970 110 ntBASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 Y_RNA.155-201ENST00000363632 101 ntBASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 RNA5SP508-201ENST00000411327 119 ntBASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 MTATP8P2-201ENST00000435212 202 ntBASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 RNU6-762P-201ENST00000517107 102 ntBASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 SNORD53-201ENST00000579969 78 ntBASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 MIR4435-1-201ENST00000582552 80 ntBASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 Y_RNA.818-201ENST00000618813 71 ntBASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 SNORD3E-202ENST00000627253 216 ntBASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.03□□□□□ -2.08
SEC61A2Q9H9S3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 RNY3P2-201ENST00000362918 102 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 SNORA3A-201ENST00000364113 130 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 Y_RNA.470-201ENST00000384307 117 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 Y_RNA.507-201ENST00000384500 99 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 RNU4-53P-201ENST00000410828 140 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 RNA5SP270-201ENST00000411361 118 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 PGBD4P5-201ENST00000445958 426 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 snoU13.27-201ENST00000459278 104 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 SNORD123-201ENST00000459473 70 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 AC079804.2-201ENST00000490376 200 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 AC099513.1-201ENST00000490423 301 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 MIR6766-201ENST00000622641 72 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 AC064859.1-201ENST00000624741 174 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 AL442644.1-201ENST00000454390 3105 ntBASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SEC61A2Q9H9S3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 SNORA22.1-201ENST00000362701 134 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 RNU1-52P-201ENST00000384190 164 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-301P-201ENST00000384277 107 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 MIR605-201ENST00000385078 83 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 MIR660-201ENST00000385235 97 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-1319P-201ENST00000390855 104 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-747P-201ENST00000390928 104 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-241P-201ENST00000391148 104 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 SNORA3.2-201ENST00000408221 125 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-177P-201ENST00000411257 104 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 RPS29P29-201ENST00000456396 171 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 RNA5SP33-201ENST00000516687 98 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 RNU7-53P-201ENST00000516705 60 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 MIR3152-201ENST00000579801 74 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 FAM106DP-201ENST00000586416 501 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 AC243994.1-201ENST00000618627 109 ntBASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-661P-201ENST00000362409 107 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-457P-201ENST00000363999 107 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 Y_RNA.220-201ENST00000364244 109 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 RNU4-36P-201ENST00000364294 144 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 Y_RNA.388-201ENST00000383919 113 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 SNORA70.7-201ENST00000384159 133 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-913P-201ENST00000390913 95 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 MIR1302-4-201ENST00000408701 150 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 SNORA7.5-201ENST00000410672 110 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 RNU4-69P-201ENST00000410677 143 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 RNY4P29-201ENST00000410801 97 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 RNA5SP57-201ENST00000459463 123 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 MIR5007-201ENST00000583098 95 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 MIR548AE2-201ENST00000583456 67 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 AL590808.1-201ENST00000618696 141 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 AL513423.1-201ENST00000621695 132 ntBASIC2□□□□□ -2.09
SEC61A2Q9H9S3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 Y_RNA.107-201ENST00000363190 121 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-1099P-201ENST00000363533 107 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 RNU4-67P-201ENST00000364569 141 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 SNORA32-201ENST00000384072 121 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-409P-201ENST00000384114 104 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-616P-201ENST00000384353 107 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 Y_RNA.558-201ENST00000384685 113 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 SNORA26.2-201ENST00000390922 122 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-733P-201ENST00000410759 104 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 Z98742.3-201ENST00000418637 326 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms