Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AP001340.1-201ENST00000624405 217 ntBASIC2.32□□□□□ -2.04
TRAIPQ9BWF2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
TRAIPQ9BWF2 SNORD50.2-201ENST00000365465 70 ntBASIC2.31□□□□□ -2.04
TRAIPQ9BWF2 SNORA20-201ENST00000384662 132 ntBASIC2.31□□□□□ -2.04
TRAIPQ9BWF2 RPL31P63-201ENST00000422565 375 ntBASIC2.31□□□□□ -2.04
TRAIPQ9BWF2 MIR4524B-201ENST00000581569 115 ntBASIC2.31□□□□□ -2.04
TRAIPQ9BWF2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.31□□□□□ -2.04
TRAIPQ9BWF2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRAIPQ9BWF2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
TRAIPQ9BWF2 RNA5SP37-201ENST00000365420 130 ntBASIC2.3□□□□□ -2.04
TRAIPQ9BWF2 SNORA24-201ENST00000384096 131 ntBASIC2.3□□□□□ -2.04
TRAIPQ9BWF2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.3□□□□□ -2.04
TRAIPQ9BWF2 RNU7-73P-201ENST00000458743 63 ntBASIC2.3□□□□□ -2.04
TRAIPQ9BWF2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAIPQ9BWF2 AL133373.1-201ENST00000497098 94 ntBASIC2.3□□□□□ -2.04
TRAIPQ9BWF2 RNU1-40P-201ENST00000516816 164 ntBASIC2.3□□□□□ -2.04
TRAIPQ9BWF2 RNU1-97P-201ENST00000516872 164 ntBASIC2.3□□□□□ -2.04
TRAIPQ9BWF2 AL096861.1-201ENST00000610899 123 ntBASIC2.3□□□□□ -2.04
TRAIPQ9BWF2 AC011603.4-201ENST00000611325 277 ntBASIC2.3□□□□□ -2.04
TRAIPQ9BWF2 MIR8065-201ENST00000620577 100 ntBASIC2.3□□□□□ -2.04
TRAIPQ9BWF2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRAIPQ9BWF2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAIPQ9BWF2 RNU6-187P-201ENST00000384139 106 ntBASIC2.29□□□□□ -2.04
TRAIPQ9BWF2 DNAJC19P9-201ENST00000555084 351 ntBASIC2.29□□□□□ -2.04
TRAIPQ9BWF2 U7.2-201ENST00000607576 63 ntBASIC2.29□□□□□ -2.04
TRAIPQ9BWF2 AL591806.2-201ENST00000433122 173 ntBASIC2.28□□□□□ -2.04
TRAIPQ9BWF2 RNU6-113P-201ENST00000516653 101 ntBASIC2.28□□□□□ -2.04
TRAIPQ9BWF2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.28□□□□□ -2.04
TRAIPQ9BWF2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAIPQ9BWF2 U8.13-201ENST00000390842 128 ntBASIC2.27□□□□□ -2.05
TRAIPQ9BWF2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAIPQ9BWF2 RNA5SP272-201ENST00000516095 111 ntBASIC2.27□□□□□ -2.05
TRAIPQ9BWF2 Y_RNA.686-201ENST00000516548 134 ntBASIC2.27□□□□□ -2.05
TRAIPQ9BWF2 AC015712.3-201ENST00000559380 164 ntBASIC2.27□□□□□ -2.05
TRAIPQ9BWF2 MIR3192-201ENST00000584920 77 ntBASIC2.27□□□□□ -2.05
TRAIPQ9BWF2 AL022345.2-201ENST00000606307 135 ntBASIC2.27□□□□□ -2.05
TRAIPQ9BWF2 RNU6-704P-201ENST00000364162 103 ntBASIC2.26□□□□□ -2.05
TRAIPQ9BWF2 MIR539-201ENST00000365690 78 ntBASIC2.26□□□□□ -2.05
TRAIPQ9BWF2 RNY1P6-201ENST00000384193 109 ntBASIC2.26□□□□□ -2.05
TRAIPQ9BWF2 AL392103.1-201ENST00000447000 198 ntBASIC2.26□□□□□ -2.05
TRAIPQ9BWF2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.26□□□□□ -2.05
TRAIPQ9BWF2 MIR4769-201ENST00000584126 77 ntBASIC2.26□□□□□ -2.05
TRAIPQ9BWF2 MIR5002-201ENST00000584713 97 ntBASIC2.26□□□□□ -2.05
TRAIPQ9BWF2 SNORA1.1-201ENST00000364671 133 ntBASIC2.25□□□□□ -2.05
TRAIPQ9BWF2 RNU6-690P-201ENST00000365242 106 ntBASIC2.25□□□□□ -2.05
TRAIPQ9BWF2 MIR764-201ENST00000390811 85 ntBASIC2.25□□□□□ -2.05
TRAIPQ9BWF2 TMSB4XP3-201ENST00000445144 114 ntBASIC2.25□□□□□ -2.05
TRAIPQ9BWF2 RNU6-893P-201ENST00000458841 100 ntBASIC2.25□□□□□ -2.05
TRAIPQ9BWF2 CYP3A52P-201ENST00000563326 91 ntBASIC2.25□□□□□ -2.05
TRAIPQ9BWF2 AP000553.5-201ENST00000641933 54 ntBASIC2.25□□□□□ -2.05
TRAIPQ9BWF2 RNY1P11-201ENST00000363759 113 ntBASIC2.24□□□□□ -2.05
TRAIPQ9BWF2 SNORA26.9-201ENST00000391322 122 ntBASIC2.24□□□□□ -2.05
TRAIPQ9BWF2 AC019129.1-201ENST00000403786 261 ntBASIC2.24□□□□□ -2.05
TRAIPQ9BWF2 RNA5SP182-201ENST00000516064 82 ntBASIC2.24□□□□□ -2.05
TRAIPQ9BWF2 RNA5SP236-201ENST00000516169 116 ntBASIC2.24□□□□□ -2.05
TRAIPQ9BWF2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.23□□□□□ -2.05
TRAIPQ9BWF2 AC009474.2-201ENST00000451383 136 ntBASIC2.23□□□□□ -2.05
TRAIPQ9BWF2 RNU6-717P-201ENST00000459076 104 ntBASIC2.23□□□□□ -2.05
TRAIPQ9BWF2 AC025033.1-201ENST00000463883 194 ntBASIC2.23□□□□□ -2.05
TRAIPQ9BWF2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAIPQ9BWF2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.23□□□□□ -2.05
TRAIPQ9BWF2 MIR103A2-201ENST00000362154 78 ntBASIC2.22□□□□□ -2.05
TRAIPQ9BWF2 RNU6-309P-201ENST00000364573 106 ntBASIC2.22□□□□□ -2.05
TRAIPQ9BWF2 Y_RNA.354-201ENST00000365448 111 ntBASIC2.22□□□□□ -2.05
TRAIPQ9BWF2 SNORA31.4-201ENST00000516049 129 ntBASIC2.22□□□□□ -2.05
TRAIPQ9BWF2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.22□□□□□ -2.05
TRAIPQ9BWF2 uc_338.20-201ENST00000621563 178 ntBASIC2.22□□□□□ -2.05
TRAIPQ9BWF2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TRAIPQ9BWF2 SNORA25.3-201ENST00000363205 127 ntBASIC2.21□□□□□ -2.06
TRAIPQ9BWF2 RNU6-482P-201ENST00000391068 107 ntBASIC2.21□□□□□ -2.06
TRAIPQ9BWF2 RNU6-257P-201ENST00000410238 98 ntBASIC2.21□□□□□ -2.06
TRAIPQ9BWF2 MTND4LP9-201ENST00000427694 174 ntBASIC2.21□□□□□ -2.06
TRAIPQ9BWF2 AC245047.7-201ENST00000440265 293 ntBASIC2.21□□□□□ -2.06
TRAIPQ9BWF2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRAIPQ9BWF2 AC108210.2-201ENST00000503681 201 ntBASIC2.21□□□□□ -2.06
TRAIPQ9BWF2 RNU2-60P-201ENST00000517290 128 ntBASIC2.21□□□□□ -2.06
TRAIPQ9BWF2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
TRAIPQ9BWF2 RNU6-396P-201ENST00000365369 105 ntBASIC2.2□□□□□ -2.06
TRAIPQ9BWF2 RNU6-165P-201ENST00000517170 99 ntBASIC2.2□□□□□ -2.06
TRAIPQ9BWF2 MIR548AO-201ENST00000579992 96 ntBASIC2.2□□□□□ -2.06
TRAIPQ9BWF2 AL020996.3-201ENST00000606617 222 ntBASIC2.2□□□□□ -2.06
TRAIPQ9BWF2 RNU6-647P-201ENST00000364243 107 ntBASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 SNORD38B-201ENST00000384690 67 ntBASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 RNU6-913P-201ENST00000390913 95 ntBASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 RPS3AP1-201ENST00000413190 320 ntBASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 RNU6-1211P-201ENST00000459179 105 ntBASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 RNU6-970P-201ENST00000516312 107 ntBASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 RNU11-2P-201ENST00000516898 142 ntBASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 RNU6-295P-201ENST00000516901 104 ntBASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 AC133485.4-201ENST00000561835 220 ntBASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 AC138907.4-201ENST00000570107 226 ntBASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 AC021613.1-201ENST00000623880 111 ntBASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 SNORD38B-202ENST00000625943 69 ntBASIC2.19□□□□□ -2.06
TRAIPQ9BWF2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAIPQ9BWF2 RNA5SP264-201ENST00000363115 107 ntBASIC2.18□□□□□ -2.06
TRAIPQ9BWF2 RNU6-1319P-201ENST00000390855 104 ntBASIC2.18□□□□□ -2.06
TRAIPQ9BWF2 RNU6-747P-201ENST00000390928 104 ntBASIC2.18□□□□□ -2.06
TRAIPQ9BWF2 RNU6-241P-201ENST00000391148 104 ntBASIC2.18□□□□□ -2.06
TRAIPQ9BWF2 RNU6-177P-201ENST00000411257 104 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 216.4 ms