Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MIR4791-201ENST00000607666 84 ntBASIC1.67□□□□□ -2.14
VRK1Q99986 AL353997.5-201ENST00000618886 171 ntBASIC1.67□□□□□ -2.14
VRK1Q99986 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
VRK1Q99986 U8.1-201ENST00000362843 134 ntBASIC1.66□□□□□ -2.14
VRK1Q99986 RPS29P29-201ENST00000456396 171 ntBASIC1.66□□□□□ -2.14
VRK1Q99986 SNORD111.1-201ENST00000516421 86 ntBASIC1.66□□□□□ -2.14
VRK1Q99986 AP001328.1-201ENST00000528550 176 ntBASIC1.66□□□□□ -2.14
VRK1Q99986 MIR3664-201ENST00000579074 99 ntBASIC1.66□□□□□ -2.14
VRK1Q99986 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.66□□□□□ -2.14
VRK1Q99986 SNRPGP19-201ENST00000603826 189 ntBASIC1.66□□□□□ -2.14
VRK1Q99986 AP001485.1-201ENST00000604799 199 ntBASIC1.66□□□□□ -2.14
VRK1Q99986 AC243994.1-201ENST00000618627 109 ntBASIC1.66□□□□□ -2.14
VRK1Q99986 AC008133.2-201ENST00000624540 351 ntBASIC1.66□□□□□ -2.14
VRK1Q99986 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
VRK1Q99986 AC092881.1-201ENST00000638218 2733 ntBASIC1.66□□□□□ -2.14
VRK1Q99986 RNA5SP99-201ENST00000364020 114 ntBASIC1.65□□□□□ -2.15
VRK1Q99986 SNORA51.10-201ENST00000384418 136 ntBASIC1.65□□□□□ -2.15
VRK1Q99986 SNORA40-201ENST00000388090 126 ntBASIC1.65□□□□□ -2.15
VRK1Q99986 U8.13-201ENST00000390842 128 ntBASIC1.65□□□□□ -2.15
VRK1Q99986 RNU6-902P-201ENST00000517212 91 ntBASIC1.65□□□□□ -2.15
VRK1Q99986 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
VRK1Q99986 MIR5089-201ENST00000580047 84 ntBASIC1.65□□□□□ -2.15
VRK1Q99986 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.65□□□□□ -2.15
VRK1Q99986 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
VRK1Q99986 RNU6-915P-201ENST00000364943 103 ntBASIC1.64□□□□□ -2.15
VRK1Q99986 RNU6-257P-201ENST00000410238 98 ntBASIC1.64□□□□□ -2.15
VRK1Q99986 RNU7-73P-201ENST00000458743 63 ntBASIC1.64□□□□□ -2.15
VRK1Q99986 RNU7-67P-201ENST00000459003 62 ntBASIC1.64□□□□□ -2.15
VRK1Q99986 RNA5SP182-201ENST00000516064 82 ntBASIC1.64□□□□□ -2.15
VRK1Q99986 RNU7-53P-201ENST00000516705 60 ntBASIC1.64□□□□□ -2.15
VRK1Q99986 RNU7-70P-201ENST00000516941 66 ntBASIC1.64□□□□□ -2.15
VRK1Q99986 AL512310.8-201ENST00000550183 120 ntBASIC1.64□□□□□ -2.15
VRK1Q99986 MIR6845-201ENST00000613182 61 ntBASIC1.64□□□□□ -2.15
VRK1Q99986 TUG1_4.1-201ENST00000619464 181 ntBASIC1.64□□□□□ -2.15
VRK1Q99986 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
VRK1Q99986 RNU1-133P-201ENST00000364867 167 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 RNU6-482P-201ENST00000391068 107 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 SNORA26.9-201ENST00000391322 122 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 RPS27P16-201ENST00000425758 201 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 MTND4LP9-201ENST00000427694 174 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 RPL39P39-201ENST00000455840 151 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 snoU13.16-201ENST00000459350 104 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 RNU7-41P-201ENST00000515917 61 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 RNA5SP272-201ENST00000516095 111 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 Y_RNA.690-201ENST00000516603 95 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 Y_RNA.692-201ENST00000516627 105 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 RNU6-113P-201ENST00000516653 101 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 AL096861.1-201ENST00000610899 123 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 AC011603.4-201ENST00000611325 277 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.63□□□□□ -2.15
VRK1Q99986 AC091932.4-201ENST00000623386 200 ntBASIC1.63□□□□□ -2.15
VRK1Q99986 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
VRK1Q99986 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VRK1Q99986 RNA5SP48-201ENST00000363969 126 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 SNORA20-201ENST00000384662 132 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 MIR570-201ENST00000384917 97 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 Y_RNA.586-201ENST00000391146 98 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 TMSB4XP3-201ENST00000445144 114 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.62□□□□□ -2.15
VRK1Q99986 RNU2-11P-201ENST00000459191 187 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 Y_RNA.686-201ENST00000516548 134 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 RNU6-958P-201ENST00000516995 106 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 MIR3121-201ENST00000579680 77 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 MIR3192-201ENST00000584920 77 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 U7.2-201ENST00000607576 63 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 AL121890.5-201ENST00000620848 304 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 MIR4251-201ENST00000635819 61 ntBASIC1.62□□□□□ -2.15
VRK1Q99986 RNU6-309P-201ENST00000364573 106 ntBASIC1.61□□□□□ -2.15
VRK1Q99986 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
VRK1Q99986 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
VRK1Q99986 AL133373.1-201ENST00000497098 94 ntBASIC1.61□□□□□ -2.15
VRK1Q99986 RNU6-165P-201ENST00000517170 99 ntBASIC1.61□□□□□ -2.15
VRK1Q99986 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.61□□□□□ -2.15
VRK1Q99986 MIR4285-201ENST00000581001 85 ntBASIC1.61□□□□□ -2.15
VRK1Q99986 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.6□□□□□ -2.15
VRK1Q99986 MIR302B-201ENST00000362188 73 ntBASIC1.6□□□□□ -2.15
VRK1Q99986 Y_RNA.757-201ENST00000578934 114 ntBASIC1.6□□□□□ -2.15
VRK1Q99986 MIR3910-1-201ENST00000580936 111 ntBASIC1.6□□□□□ -2.15
VRK1Q99986 AC091895.1-201ENST00000624494 256 ntBASIC1.6□□□□□ -2.15
VRK1Q99986 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VRK1Q99986 MIR342-201ENST00000362212 99 ntBASIC1.59□□□□□ -2.15
VRK1Q99986 Y_RNA.140-201ENST00000363474 103 ntBASIC1.59□□□□□ -2.15
VRK1Q99986 MIR539-201ENST00000365690 78 ntBASIC1.59□□□□□ -2.15
VRK1Q99986 RNU6-1054P-201ENST00000411293 104 ntBASIC1.59□□□□□ -2.15
VRK1Q99986 Y_RNA.651-201ENST00000459380 103 ntBASIC1.59□□□□□ -2.15
VRK1Q99986 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.59□□□□□ -2.15
VRK1Q99986 MIR3618-201ENST00000580330 88 ntBASIC1.59□□□□□ -2.15
VRK1Q99986 AL022345.2-201ENST00000606307 135 ntBASIC1.59□□□□□ -2.15
VRK1Q99986 AL596211.1-201ENST00000569873 2277 ntBASIC1.59□□□□□ -2.16
VRK1Q99986 ZNF355P-201ENST00000427301 3216 ntBASIC1.59□□□□□ -2.16
VRK1Q99986 RNU6-349P-201ENST00000362402 107 ntBASIC1.58□□□□□ -2.16
VRK1Q99986 RNU6-81P-201ENST00000365608 104 ntBASIC1.58□□□□□ -2.16
VRK1Q99986 RNY1P6-201ENST00000384193 109 ntBASIC1.58□□□□□ -2.16
VRK1Q99986 RNU4-61P-201ENST00000411243 107 ntBASIC1.58□□□□□ -2.16
VRK1Q99986 SNORA31.4-201ENST00000516049 129 ntBASIC1.58□□□□□ -2.16
VRK1Q99986 RNU6-947P-201ENST00000516264 106 ntBASIC1.58□□□□□ -2.16
VRK1Q99986 SNORA25.15-201ENST00000516487 89 ntBASIC1.58□□□□□ -2.16
VRK1Q99986 RNU6-789P-201ENST00000517105 102 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms