Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC022202.1-201ENST00000613515 211 ntBASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 Y_RNA.171-201ENST00000363760 102 ntBASIC2.21□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU1-148P-201ENST00000384472 162 ntBASIC2.21□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR1255A-201ENST00000408338 113 ntBASIC2.21□□□□□ -2.06
CDK5RAP1Q96SZ6 STAG3L5P-204ENST00000443759 179 ntBASIC2.21□□□□□ -2.06
CDK5RAP1Q96SZ6 AC109327.2-201ENST00000448339 378 ntBASIC2.21□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR1270-201ENST00000459320 83 ntBASIC2.21□□□□□ -2.06
CDK5RAP1Q96SZ6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.21□□□□□ -2.06
CDK5RAP1Q96SZ6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.21□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR2052-201ENST00000636055 55 ntBASIC2.21□□□□□ -2.06
CDK5RAP1Q96SZ6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-1125P-201ENST00000363601 107 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.155-201ENST00000363632 101 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.190-201ENST00000363964 101 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 RNA5SP493-201ENST00000364115 91 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.219-201ENST00000364232 113 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU4-36P-201ENST00000364294 144 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.241-201ENST00000364470 117 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.360-201ENST00000365512 102 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 SNORA64-201ENST00000384674 134 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR561-201ENST00000385216 97 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 SRIP3-201ENST00000413200 219 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 BTF3P4-201ENST00000418852 495 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 SNORA31.10-201ENST00000516482 106 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.685-201ENST00000516532 108 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-267P-201ENST00000516714 103 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.2□□□□□ -2.06
CDK5RAP1Q96SZ6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 MIRLET7C-201ENST00000362160 84 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-170P-201ENST00000362832 104 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 SNORA27-201ENST00000384323 126 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR1261-201ENST00000408659 82 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR1912-201ENST00000410389 80 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 SNORA7.5-201ENST00000410672 110 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 POLR2J4-204ENST00000418424 324 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 HSPE1P9-201ENST00000440046 311 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 RPS23P4-201ENST00000487908 423 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR3169-201ENST00000578032 83 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR3683-201ENST00000580847 82 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CDK5RAP1Q96SZ6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.99-201ENST00000363138 105 ntBASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-832P-201ENST00000363319 107 ntBASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-679P-201ENST00000391003 106 ntBASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.601-201ENST00000410500 113 ntBASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 CST2P1-201ENST00000425770 87 ntBASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU2-11P-201ENST00000459191 187 ntBASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU7-80P-201ENST00000459562 61 ntBASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 AC090821.2-201ENST00000523552 176 ntBASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR4777-201ENST00000583710 86 ntBASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
CDK5RAP1Q96SZ6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 SNORD114-1-201ENST00000362705 72 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.242-201ENST00000364473 110 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU4-67P-201ENST00000364569 141 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.336-201ENST00000365307 109 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-787P-201ENST00000384032 107 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU4-52P-201ENST00000384209 138 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.467-201ENST00000384297 102 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.470-201ENST00000384307 117 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-163P-201ENST00000384396 106 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-160P-201ENST00000384591 107 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU11-5P-201ENST00000391216 129 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-733P-201ENST00000410759 104 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-1190P-201ENST00000410811 104 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 RNA5SP233-201ENST00000459153 113 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU7-94P-201ENST00000459576 63 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 AC104435.1-201ENST00000483483 166 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 SNORA31.25-201ENST00000517242 134 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU2-19P-201ENST00000517288 84 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR8054-201ENST00000620877 86 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 AC021613.1-201ENST00000623880 111 ntBASIC2.17□□□□□ -2.06
CDK5RAP1Q96SZ6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 RNY1P1-201ENST00000364372 112 ntBASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-616P-201ENST00000384353 107 ntBASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 Y_RNA.507-201ENST00000384500 99 ntBASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR516B2-201ENST00000385190 85 ntBASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-402P-201ENST00000410678 103 ntBASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 AC004941.2-201ENST00000427009 228 ntBASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 AC087499.4-201ENST00000448505 178 ntBASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 snoU13.15-201ENST00000459407 104 ntBASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 snoU13.26-201ENST00000459452 105 ntBASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-998P-201ENST00000515894 101 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms