Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 SUMO2P16-201ENST00000519475 264 ntBASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 AC091895.1-201ENST00000624494 256 ntBASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 AC010332.2-201ENST00000613083 1904 ntBASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 U8.1-201ENST00000362843 134 ntBASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 RNU6-833P-201ENST00000363486 107 ntBASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 SNORA25.9-201ENST00000365087 128 ntBASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 SNORD24-201ENST00000383884 75 ntBASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 MIR499A-201ENST00000384903 122 ntBASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 SNORD77.3-201ENST00000391113 65 ntBASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 RNU6-257P-201ENST00000410238 98 ntBASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 MIR7974-201ENST00000615835 79 ntBASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 AL513423.1-201ENST00000621695 132 ntBASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 AC106754.2-201ENST00000623006 233 ntBASIC1.2□□□□□ -2.22
FOXN4Q96NZ1 AL157777.2-201ENST00000258070 137 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 SNORD115-28-201ENST00000363931 81 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 Y_RNA.251-201ENST00000364551 99 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 RNU6-392P-201ENST00000364926 101 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 SNORD38C-201ENST00000384381 69 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 Y_RNA.542-201ENST00000384641 111 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 SNORA19-201ENST00000384737 128 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 MIR526A1-201ENST00000384897 85 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 Y_RNA.584-201ENST00000391090 114 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 RNA5SP127-201ENST00000411051 133 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 TMSB4XP3-201ENST00000445144 114 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 AL365205.2-201ENST00000594586 68 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 MIR376A2-201ENST00000636782 80 ntBASIC1.19□□□□□ -2.22
FOXN4Q96NZ1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 Y_RNA.37-201ENST00000362606 108 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 RNU6-508P-201ENST00000363231 103 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 RNU6-915P-201ENST00000364943 103 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 SNORD50.2-201ENST00000365465 70 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 MTND4LP9-201ENST00000427694 174 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 JTBP1-201ENST00000441314 247 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 AC079140.2-201ENST00000506193 142 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 Y_RNA.686-201ENST00000516548 134 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 SNORD36C-201ENST00000516733 66 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 RNU6-789P-201ENST00000517105 102 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 RNU7-181P-201ENST00000517234 74 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 AC131055.1-201ENST00000584626 316 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 U2.22-201ENST00000636441 106 ntBASIC1.18□□□□□ -2.22
FOXN4Q96NZ1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 MTND5P32-201ENST00000560711 1802 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 Y_RNA.52-201ENST00000362760 96 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 Y_RNA.294-201ENST00000364916 102 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 MIR194-1-201ENST00000384892 85 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 MIR624-201ENST00000385217 97 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 Y_RNA.586-201ENST00000391146 98 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 RNU1-123P-201ENST00000458950 160 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 RNU5E-3P-201ENST00000515913 68 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 RNU4-57P-201ENST00000515980 135 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 RNU6-406P-201ENST00000516470 107 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 MIR3937-201ENST00000580135 106 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 FAM106DP-201ENST00000586416 501 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 AC134878.1-201ENST00000619901 243 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 AC132825.6-201ENST00000638861 357 ntBASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.17□□□□□ -2.22
FOXN4Q96NZ1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 SNORD1A-201ENST00000364968 72 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 RNA5SP259-201ENST00000365541 109 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 Y_RNA.494-201ENST00000384432 111 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 MIR452-201ENST00000385020 85 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 MIR136-201ENST00000385207 82 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 SNORA40-201ENST00000388090 126 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 RNU6-938P-201ENST00000411285 103 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 AL606753.1-201ENST00000427435 87 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 RPS29P29-201ENST00000456396 171 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 RNU6-1211P-201ENST00000459179 105 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 AC004223.1-201ENST00000479840 271 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 RNU6-1149P-201ENST00000516810 97 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 SNORA18.7-201ENST00000516910 131 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 RNU6-971P-201ENST00000516920 106 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 RNU2-60P-201ENST00000517290 128 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 AC019176.1-201ENST00000518519 225 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 AP001328.1-201ENST00000528550 176 ntBASIC1.16□□□□□ -2.22
FOXN4Q96NZ1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.22
FOXN4Q96NZ1 MIR342-201ENST00000362212 99 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 MIR302D-201ENST00000362275 68 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 SNORD33-201ENST00000362761 85 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 Y_RNA.241-201ENST00000364470 117 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 RNU6-1292P-201ENST00000383856 107 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 RNU6-1189P-201ENST00000383958 107 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 MIR513A1-201ENST00000385138 129 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 U8.17-201ENST00000391292 132 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 RPS27P16-201ENST00000425758 201 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 RNU6-917P-201ENST00000516294 104 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 RNU7-40P-201ENST00000516397 64 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 AP003484.1-201ENST00000530974 250 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 AC011603.4-201ENST00000611325 277 ntBASIC1.15□□□□□ -2.23
FOXN4Q96NZ1 RNU6-309P-201ENST00000364573 106 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 380.4 ms