Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RPL30P7-201ENST00000479312 323 ntBASIC1.59□□□□□ -2.15
SNX27Q96L92 RNU6-693P-201ENST00000516134 107 ntBASIC1.59□□□□□ -2.15
SNX27Q96L92 RNU6-504P-201ENST00000516568 104 ntBASIC1.59□□□□□ -2.15
SNX27Q96L92 RNU6-197P-201ENST00000516680 100 ntBASIC1.59□□□□□ -2.15
SNX27Q96L92 AP002392.1-201ENST00000537692 208 ntBASIC1.59□□□□□ -2.15
SNX27Q96L92 U6.106-201ENST00000636360 105 ntBASIC1.59□□□□□ -2.15
SNX27Q96L92 AC008163.1-202ENST00000636004 2889 ntBASIC1.59□□□□□ -2.16
SNX27Q96L92 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNX27Q96L92 Y_RNA.29-201ENST00000362570 113 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 Y_RNA.233-201ENST00000364407 101 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 RNU6-275P-201ENST00000364910 107 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 Y_RNA.412-201ENST00000384001 104 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 SNORD61-201ENST00000384252 73 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 RNU6-947P-201ENST00000516264 106 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 Y_RNA.700-201ENST00000516806 100 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 SNORA74.3-201ENST00000517108 154 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 RNU6-794P-201ENST00000517261 64 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 AL357312.1-201ENST00000603879 298 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 AP001485.1-201ENST00000604799 199 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 AL020996.3-201ENST00000606617 222 ntBASIC1.58□□□□□ -2.16
SNX27Q96L92 Y_RNA.75-201ENST00000362927 97 ntBASIC1.57□□□□□ -2.16
SNX27Q96L92 SNORD24-201ENST00000383884 75 ntBASIC1.57□□□□□ -2.16
SNX27Q96L92 MIR222-201ENST00000384992 110 ntBASIC1.57□□□□□ -2.16
SNX27Q96L92 MIR320A-201ENST00000385302 82 ntBASIC1.57□□□□□ -2.16
SNX27Q96L92 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
SNX27Q96L92 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SNX27Q96L92 U8.17-201ENST00000391292 132 ntBASIC1.57□□□□□ -2.16
SNX27Q96L92 RNU4-43P-201ENST00000410628 137 ntBASIC1.57□□□□□ -2.16
SNX27Q96L92 RNU6-1270P-201ENST00000517128 108 ntBASIC1.57□□□□□ -2.16
SNX27Q96L92 SNORA81.3-201ENST00000517283 198 ntBASIC1.57□□□□□ -2.16
SNX27Q96L92 AL160236.1-201ENST00000556317 195 ntBASIC1.57□□□□□ -2.16
SNX27Q96L92 AC072026.1-201ENST00000605023 201 ntBASIC1.57□□□□□ -2.16
SNX27Q96L92 Y_RNA.66-201ENST00000362862 102 ntBASIC1.56□□□□□ -2.16
SNX27Q96L92 Y_RNA.280-201ENST00000364765 112 ntBASIC1.56□□□□□ -2.16
SNX27Q96L92 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.56□□□□□ -2.16
SNX27Q96L92 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.56□□□□□ -2.16
SNX27Q96L92 RNU6-1219P-201ENST00000516143 112 ntBASIC1.56□□□□□ -2.16
SNX27Q96L92 RNU7-181P-201ENST00000517234 74 ntBASIC1.56□□□□□ -2.16
SNX27Q96L92 MRPS18CP4-201ENST00000535821 231 ntBASIC1.56□□□□□ -2.16
SNX27Q96L92 AC097639.2-201ENST00000603159 172 ntBASIC1.56□□□□□ -2.16
SNX27Q96L92 RNU6-888P-201ENST00000363010 101 ntBASIC1.55□□□□□ -2.16
SNX27Q96L92 Y_RNA.785-201ENST00000384290 109 ntBASIC1.55□□□□□ -2.16
SNX27Q96L92 MIR520C-201ENST00000385005 87 ntBASIC1.55□□□□□ -2.16
SNX27Q96L92 RNU4-57P-201ENST00000515980 135 ntBASIC1.55□□□□□ -2.16
SNX27Q96L92 RNU11-2P-201ENST00000516898 142 ntBASIC1.55□□□□□ -2.16
SNX27Q96L92 AC007751.1-201ENST00000529260 376 ntBASIC1.55□□□□□ -2.16
SNX27Q96L92 CYP3A52P-201ENST00000563326 91 ntBASIC1.55□□□□□ -2.16
SNX27Q96L92 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
SNX27Q96L92 SNORD115-28-201ENST00000363931 81 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 MIR548A2-201ENST00000384956 97 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 MIR518F-201ENST00000384973 87 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 RPL39P39-201ENST00000455840 151 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 AC023790.1-201ENST00000482174 347 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 SNORD111.1-201ENST00000516421 86 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 RN7SKP88-201ENST00000516847 250 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 MIR548AR-201ENST00000582191 57 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 7SK.8-201ENST00000612110 250 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 AC004792.1-201ENST00000614523 137 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 7SK.11-201ENST00000615477 250 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 7SK.13-201ENST00000622040 250 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 AC010487.4-201ENST00000637027 61 ntBASIC1.54□□□□□ -2.16
SNX27Q96L92 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.16
SNX27Q96L92 Y_RNA.23-201ENST00000362496 106 ntBASIC1.53□□□□□ -2.16
SNX27Q96L92 RNU6-643P-201ENST00000384018 107 ntBASIC1.53□□□□□ -2.16
SNX27Q96L92 SNORD28B-201ENST00000390993 75 ntBASIC1.53□□□□□ -2.16
SNX27Q96L92 AC006461.1-201ENST00000412637 326 ntBASIC1.53□□□□□ -2.16
SNX27Q96L92 RNU7-120P-201ENST00000459334 63 ntBASIC1.53□□□□□ -2.16
SNX27Q96L92 RNU7-43P-201ENST00000516554 64 ntBASIC1.53□□□□□ -2.16
SNX27Q96L92 RNU6-165P-201ENST00000517170 99 ntBASIC1.53□□□□□ -2.16
SNX27Q96L92 MIR378D2-201ENST00000580636 98 ntBASIC1.53□□□□□ -2.16
SNX27Q96L92 MIR4764-201ENST00000580680 88 ntBASIC1.53□□□□□ -2.16
SNX27Q96L92 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SNX27Q96L92 U8.1-201ENST00000362843 134 ntBASIC1.52□□□□□ -2.17
SNX27Q96L92 RNU6-312P-201ENST00000364629 107 ntBASIC1.52□□□□□ -2.17
SNX27Q96L92 SNORA1.2-201ENST00000365189 134 ntBASIC1.52□□□□□ -2.17
SNX27Q96L92 Y_RNA.370-201ENST00000365589 108 ntBASIC1.52□□□□□ -2.17
SNX27Q96L92 RNU6-182P-201ENST00000516970 105 ntBASIC1.52□□□□□ -2.17
SNX27Q96L92 MIR4431-201ENST00000579990 94 ntBASIC1.52□□□□□ -2.17
SNX27Q96L92 Y_RNA.37-201ENST00000362606 108 ntBASIC1.51□□□□□ -2.17
SNX27Q96L92 RNU6-30P-201ENST00000384561 107 ntBASIC1.51□□□□□ -2.17
SNX27Q96L92 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.51□□□□□ -2.17
SNX27Q96L92 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SNX27Q96L92 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
SNX27Q96L92 AF228730.3-201ENST00000436691 102 ntBASIC1.51□□□□□ -2.17
SNX27Q96L92 SNORD116-25-201ENST00000516517 92 ntBASIC1.51□□□□□ -2.17
SNX27Q96L92 RNU6-861P-201ENST00000516745 106 ntBASIC1.51□□□□□ -2.17
SNX27Q96L92 AL096861.1-201ENST00000610899 123 ntBASIC1.51□□□□□ -2.17
SNX27Q96L92 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
SNX27Q96L92 AC134878.1-201ENST00000619901 243 ntBASIC1.51□□□□□ -2.17
SNX27Q96L92 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.51□□□□□ -2.17
SNX27Q96L92 SNORD114-23-201ENST00000363536 72 ntBASIC1.5□□□□□ -2.17
SNX27Q96L92 Y_RNA.241-201ENST00000364470 117 ntBASIC1.5□□□□□ -2.17
SNX27Q96L92 SNORA1-201ENST00000384107 130 ntBASIC1.5□□□□□ -2.17
SNX27Q96L92 RNU6-1067P-201ENST00000384752 107 ntBASIC1.5□□□□□ -2.17
SNX27Q96L92 MIR570-201ENST00000384917 97 ntBASIC1.5□□□□□ -2.17
SNX27Q96L92 SEPT7P4-201ENST00000437076 306 ntBASIC1.5□□□□□ -2.17
SNX27Q96L92 AC087499.4-201ENST00000448505 178 ntBASIC1.5□□□□□ -2.17
SNX27Q96L92 RNA5SP285-201ENST00000516619 119 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms